FFCP PHASE1:Hg19::chr4:109089901..109089930,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51176 | |EntrezGene=51176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6551 | |HGNC=6551 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJU2,Q659G9 | |UniProt=Q9UJU2,Q659G9 | ||
|association_with_transcript=181bp_to_ENST00000379951,NM_001130713,NM_001130714,NM_016269_5end | |association_with_transcript=181bp_to_ENST00000379951,NM_001130713,NM_001130714,NM_016269_5end | ||
|cluster_id=chr4:109089901..109089930,- | |||
|coexpression_cluster_id=C1082 | |||
|description=CAGE_peak_3_at_LEF1_5end | |description=CAGE_peak_3_at_LEF1_5end | ||
|id=chr4:109089901..109089930,- | |id=chr4:109089901..109089930,- | ||
|ontology_enrichment_celltype=CL:0000791!1.08e-12!18;CL:0000789!1.08e-12!18;CL:0002420!1.08e-12!18;CL:0002419!1.08e-12!18;CL:0000790!1.08e-12!18;CL:0000542!3.65e-12!53;CL:0000051!3.65e-12!53;CL:0000084!5.77e-12!25;CL:0000827!5.77e-12!25;CL:0000838!1.35e-11!52;CL:0000625!1.72e-09!11 | |ontology_enrichment_celltype=CL:0000791!1.08e-12!18;CL:0000789!1.08e-12!18;CL:0002420!1.08e-12!18;CL:0002419!1.08e-12!18;CL:0000790!1.08e-12!18;CL:0000542!3.65e-12!53;CL:0000051!3.65e-12!53;CL:0000084!5.77e-12!25;CL:0000827!5.77e-12!25;CL:0000838!1.35e-11!52;CL:0000625!1.72e-09!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;5.54e-19;18!CL:0000789;5.54e-19;18!CL:0002419;5.54e-19;18!CL:0000084;7.23e-18;25!CL:0000625;1.14e-13;11!CL:0000624;2.00e-08;6!CL:0000542;7.22e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.03e-19,18;CL:0000789,6.03e-19,18;CL:0002420,6.03e-19,18;CL:0002419,6.03e-19,18;CL:0000790,6.03e-19,18;CL:0000084,7.76e-18,25;CL:0000827,7.76e-18,25;CL:0000625,1.20e-13,11;CL:0000542,4.57e-13,53;CL:0000051,4.57e-13,53;CL:0000838,2.67e-12,52;CL:0000624,2.07e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000790;5.54e-19;18!CL:0000051;7.22e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1036,9.55e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.16e-22!115;UBERON:0001049!3.33e-14!57;UBERON:0005068!3.33e-14!57;UBERON:0006241!3.33e-14!57;UBERON:0007135!3.33e-14!57;UBERON:0001017!5.08e-12!82;UBERON:0002616!1.44e-11!59;UBERON:0000955!1.61e-11!69;UBERON:0006238!1.61e-11!69;UBERON:0005743!3.61e-11!86;UBERON:0000178!6.50e-11!15;UBERON:0000179!6.50e-11!15;UBERON:0000463!6.50e-11!15;UBERON:0003080!2.16e-10!42;UBERON:0002780!3.65e-10!41;UBERON:0001890!3.65e-10!41;UBERON:0006240!3.65e-10!41;UBERON:0000073!6.57e-10!94;UBERON:0001016!6.57e-10!94;UBERON:0000153!1.45e-08!129;UBERON:0007811!1.45e-08!129;UBERON:0003075!1.59e-08!86;UBERON:0007284!1.59e-08!86;UBERON:0001893!2.01e-08!34;UBERON:0002020!3.60e-08!34;UBERON:0003528!3.60e-08!34;UBERON:0002791!5.78e-08!33;UBERON:0001869!1.11e-07!32;UBERON:0002346!1.96e-07!90;UBERON:0000033!3.07e-07!123;UBERON:0001950!8.77e-07!20;UBERON:0003056!9.88e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!1.16e-22!115;UBERON:0001049!3.33e-14!57;UBERON:0005068!3.33e-14!57;UBERON:0006241!3.33e-14!57;UBERON:0007135!3.33e-14!57;UBERON:0001017!5.08e-12!82;UBERON:0002616!1.44e-11!59;UBERON:0000955!1.61e-11!69;UBERON:0006238!1.61e-11!69;UBERON:0005743!3.61e-11!86;UBERON:0000178!6.50e-11!15;UBERON:0000179!6.50e-11!15;UBERON:0000463!6.50e-11!15;UBERON:0003080!2.16e-10!42;UBERON:0002780!3.65e-10!41;UBERON:0001890!3.65e-10!41;UBERON:0006240!3.65e-10!41;UBERON:0000073!6.57e-10!94;UBERON:0001016!6.57e-10!94;UBERON:0000153!1.45e-08!129;UBERON:0007811!1.45e-08!129;UBERON:0003075!1.59e-08!86;UBERON:0007284!1.59e-08!86;UBERON:0001893!2.01e-08!34;UBERON:0002020!3.60e-08!34;UBERON:0003528!3.60e-08!34;UBERON:0002791!5.78e-08!33;UBERON:0001869!1.11e-07!32;UBERON:0002346!1.96e-07!90;UBERON:0000033!3.07e-07!123;UBERON:0001950!8.77e-07!20;UBERON:0003056!9.88e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.45e-16;15!UBERON:0000179;8.45e-16;15!UBERON:0000463;8.45e-16;15!UBERON:0002390;7.69e-11;32!UBERON:0000073;1.50e-08;53!UBERON:0002616;1.50e-08;53!UBERON:0001950;2.42e-08;20!UBERON:0002619;2.63e-08;22!UBERON:0002780;4.21e-08;41!UBERON:0001890;4.21e-08;41!UBERON:0001869;7.01e-07;32!UBERON:0001893;7.05e-07;34!UBERON:0000956;7.21e-07;25!UBERON:0000203;7.21e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.09e-18,114;UBERON:0000178,8.24e-16,15;UBERON:0000179,8.24e-16,15;UBERON:0000463,8.24e-16,15;UBERON:0001049,1.77e-15,56;UBERON:0005068,1.77e-15,56;UBERON:0006241,1.77e-15,56;UBERON:0007135,1.77e-15,56;UBERON:0000073,1.12e-13,53;UBERON:0002616,1.12e-13,53;UBERON:0001017,3.97e-12,81;UBERON:0000955,9.95e-11,68;UBERON:0006238,9.95e-11,68;UBERON:0001016,1.59e-10,89;UBERON:0002780,3.49e-10,41;UBERON:0001890,3.49e-10,41;UBERON:0003080,3.49e-10,41;UBERON:0006240,3.49e-10,41;UBERON:0002619,1.94e-08,22;UBERON:0001950,2.10e-08,20;UBERON:0001893,3.66e-08,34;UBERON:0003075,4.15e-08,82;UBERON:0007284,4.15e-08,82;UBERON:0001869,6.46e-08,32;UBERON:0003528,7.45e-08,34;UBERON:0002020,7.45e-08,34;UBERON:0002346,2.64e-07,86;UBERON:0010371,5.25e-07,104;UBERON:0000956,5.58e-07,25;UBERON:0000203,5.58e-07,25;UBERON:0002791,6.08e-07,32;UBERON:0003076,7.52e-07,15;UBERON:0003057,7.52e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,1.10808952269109,0,0.313454721478088,0.286235987131057,0.136874425072884,0,0.61130724598361,0.492603536699674,0.550975469195755,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0,0,0.587200878669695,0.553995408531877,0.802177789880567,2.60413044859022,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0.426730222566507,0.800791974072025,0,0,0.954053754535364,0,0,0.382273228125229,0,2.24203425192614,3.16060901730092,10.0321982758055,6.6811829667358,9.04646595597841,10.1983762188314,29.9848485302903,28.406868344084,74.0341567950063,1.22551502573691,18.8547780783896,18.1657793558569,22.7475245562613,0.512365278902701,1.56071217071854,14.7994114143309,13.8175008892924,22.8944437730691,20.7601188426885,27.2891644651507,22.9978152370949,4.64568305060021,7.2811893784365,8.93431358254838,7.08455137654608,12.1054857443157,14.9749194386976,6.65316431113862,10.6908334545219,11.00684855928,8.74515085866421,11.1285308460688,9.85353596305256,5.24177532384304,4.01160293675261,11.0066546950927,0,0,0,0,0,0.144846518960824,0,2.43317435151318,0.850813354476611,0,0.263504357079378,1.5062593682237,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0,0,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0.397589304964456,1.62671520017326,1.24393266018445,1.00928340350251,0,0,0.643240938192885,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,12.8024298830249,0.860919069801795,0,0.219500570817251,0,0,0.185176890317059,0.325808305310325,0,0,0.695582429850461,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0.432359860250884,0.75745460055828,1.65094525159639,0.763976851116555,0,1.71072446022705,2.77634230298973,10.5120070245371,1.14330573052231,1.90622843387113,1.74384027533312,0.66004457238855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54655368363469,3.23441362289276,2.18183161675572,1.27047312111232,1.30139853857622,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,1.17480694477644,0,9.51132920165282,5.82428342210265,5.54983300577911,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,2.41718899183244,0.601519410909855,0.276242966807689,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,1.00726411300178,0.742585499285292,0.574265537996172,0,0,0,0,0.15350367472613,0,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,6.5968189200182,5.35246044999663,5.12682468456746,6.4322579373603,9.46133228098247,7.13320642311989,3.24018862342869,6.34500141035416,0,0,0,8.17533970553162,41.838071763169,63.8853753268759,17.6963162728993,0,0,1.48171507906718,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,1.6653598399891,0,0,0.439524537815682,0,0,3.40963376167696,0,0,0,0,1.82870241333667,0.111308705022906,0,0,0.398495976502139,3.31540698637377,0.251932747854276,0.20453736500431,0,0,0,0,0,0.789147245095469,4.7896618469388,1.11136990144637,2.90799823828566,0.74214478529481,1.99613798001194,0,0,0.724999575434793,0.910347586283997,0,0,0.689486746482929,0,0.173624994933292,0,1.08536794762867,0,1.10579259931225,1.18219047581419,1.09692698576986,0,1.25481369850743,2.30850775511391,0.113942055847001,0,0,0,0.31900115973192,0.274792780205587,1.06606955203727,25.5483245489341,5.02336820464079,3.15802195610297,2.25595660617181,2.94093801476609,1.34257269580674,0.75901493089674,10.1719410547442,0.843992258112108,0,0.706765357169704,12.9833183845255,1.99052386215701,0.176915129006678,1.22206028986725,2.37216902944498,1.97702302314405,2.08843899010911,3.2352543830725,0,2.81117334870407,4.56136973039165,0,0,0,1.20990716048664,0.91821828489147,1.20054501294127,0.60129367765797,0.933193722575224,0,0,0.313932918407225,1.19472429772959,0,0,0,0,0,1.39781334593624,0,0,0,0,0.969890164884194,0,0.451961481561065,0.685209623233754,0.794858446811959,2.40581024632339,0.195551382734803,0.0801588202515337,1.06726497369676,0.39961921916426,0,2.40526851948423,0,0,0,0,0,0.209205692624666,2.75395187618069,0,0.600420288709789,1.23214841002794,1.27746588066972,0.429765441419957,0.262887354279314,0,0,0,0,0,0,0.470284307407084,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0,0,0,1.77064427945048,0,0,0,0,0,3.88797162611358,0,0.551639951094387,2.30800187793992,0,0,0.191915197319445,0,0,0,0,0,0,0,3.3657933507229,0,0.6798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| ||
|short_description=p3@LEF1 | |short_description=p3@LEF1 | ||
}} | }} |
Latest revision as of 15:11, 24 September 2015
Short description: | p3@LEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LEF1_5end |
Coexpression cluster: | C1082_acute_CD4_thymus_small_non_chronic_lymphangiectasia |
Association with transcript: | 181bp_to_ENST00000379951, NM_001130713, NM_001130714, NM_016269_5end |
EntrezGene: | LEF1 |
HGNC: | 6551 |
UniProt: | Q9UJU2Q659G9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.03e-19 | 18 |
alpha-beta T cell | 6.03e-19 | 18 |
immature T cell | 6.03e-19 | 18 |
mature T cell | 6.03e-19 | 18 |
immature alpha-beta T cell | 6.03e-19 | 18 |
T cell | 7.76e-18 | 25 |
pro-T cell | 7.76e-18 | 25 |
CD8-positive, alpha-beta T cell | 1.20e-13 | 11 |
lymphocyte | 4.57e-13 | 53 |
common lymphoid progenitor | 4.57e-13 | 53 |
lymphoid lineage restricted progenitor cell | 2.67e-12 | 52 |
CD4-positive, alpha-beta T cell | 2.07e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.09e-18 | 114 |
blood | 8.24e-16 | 15 |
haemolymphatic fluid | 8.24e-16 | 15 |
organism substance | 8.24e-16 | 15 |
neural tube | 1.77e-15 | 56 |
neural rod | 1.77e-15 | 56 |
future spinal cord | 1.77e-15 | 56 |
neural keel | 1.77e-15 | 56 |
regional part of nervous system | 1.12e-13 | 53 |
regional part of brain | 1.12e-13 | 53 |
central nervous system | 3.97e-12 | 81 |
brain | 9.95e-11 | 68 |
future brain | 9.95e-11 | 68 |
nervous system | 1.59e-10 | 89 |
regional part of forebrain | 3.49e-10 | 41 |
forebrain | 3.49e-10 | 41 |
anterior neural tube | 3.49e-10 | 41 |
future forebrain | 3.49e-10 | 41 |
regional part of cerebral cortex | 1.94e-08 | 22 |
neocortex | 2.10e-08 | 20 |
telencephalon | 3.66e-08 | 34 |
neural plate | 4.15e-08 | 82 |
presumptive neural plate | 4.15e-08 | 82 |
cerebral hemisphere | 6.46e-08 | 32 |
brain grey matter | 7.45e-08 | 34 |
gray matter | 7.45e-08 | 34 |
neurectoderm | 2.64e-07 | 86 |
ecto-epithelium | 5.25e-07 | 104 |
cerebral cortex | 5.58e-07 | 25 |
pallium | 5.58e-07 | 25 |
regional part of telencephalon | 6.08e-07 | 32 |
posterior neural tube | 7.52e-07 | 15 |
chordal neural plate | 7.52e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 9.55e-07 | 8 |