FFCP PHASE1:Hg19::chr7:103630096..103630116,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5649 | |EntrezGene=5649 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9957 | |HGNC=9957 | ||
|TSSclassifier=strong | |||
|UniProt=P78509,F8WF74 | |UniProt=P78509,F8WF74 | ||
|association_with_transcript=-133bp_to_ENST00000343529,ENST00000424685,ENST00000424828,ENST00000428762,ENST00000448171,NM_005045,NM_173054,uc003vca.2,uc010liz.2_5end | |association_with_transcript=-133bp_to_ENST00000343529,ENST00000424685,ENST00000424828,ENST00000428762,ENST00000448171,NM_005045,NM_173054,uc003vca.2,uc010liz.2_5end | ||
|cluster_id=chr7:103630096..103630116,- | |||
|coexpression_cluster_id=C2873 | |||
|description=CAGE_peak_1_at_RELN_5end | |description=CAGE_peak_1_at_RELN_5end | ||
|id=chr7:103630096..103630116,- | |id=chr7:103630096..103630116,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.71e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;4.72e-18;22!UBERON:0001950;2.02e-16;20!UBERON:0003528;3.48e-16;34!UBERON:0002020;3.48e-16;34!UBERON:0001869;4.11e-16;32!UBERON:0002780;5.47e-16;41!UBERON:0001890;5.47e-16;41!UBERON:0002791;5.59e-16;32!UBERON:0001893;6.03e-16;34!UBERON:0000073;8.30e-16;53!UBERON:0002616;8.30e-16;53!UBERON:0000956;5.79e-15;25!UBERON:0000203;5.79e-15;25!UBERON:0007023;9.17e-12;114!UBERON:0000955;2.43e-11;68!UBERON:0001017;8.27e-11;75!UBERON:0001016;7.32e-10;83!UBERON:0004732;4.77e-08;13!UBERON:0004733;8.44e-08;12!UBERON:0002028;8.44e-08;12!UBERON:0007625;1.06e-07;11!UBERON:0001871;2.23e-07;6!UBERON:0001032;7.22e-07;24!UBERON:0004456;7.22e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.70e-42,114;UBERON:0003075,1.53e-34,82;UBERON:0007284,1.53e-34,82;UBERON:0002346,9.06e-33,86;UBERON:0001049,1.41e-30,56;UBERON:0005068,1.41e-30,56;UBERON:0006241,1.41e-30,56;UBERON:0007135,1.41e-30,56;UBERON:0000073,2.72e-28,53;UBERON:0002616,2.72e-28,53;UBERON:0010371,1.05e-26,104;UBERON:0001017,7.63e-26,81;UBERON:0003056,3.58e-25,61;UBERON:0001016,3.87e-24,89;UBERON:0000955,8.40e-24,68;UBERON:0006238,8.40e-24,68;UBERON:0010314,9.14e-22,132;UBERON:0002780,1.26e-21,41;UBERON:0001890,1.26e-21,41;UBERON:0003080,1.26e-21,41;UBERON:0006240,1.26e-21,41;UBERON:0011216,4.29e-19,223;UBERON:0001893,5.30e-19,34;UBERON:0003528,6.76e-19,34;UBERON:0002020,6.76e-19,34;UBERON:0004111,3.17e-18,240;UBERON:0002619,3.96e-18,22;UBERON:0001869,5.64e-18,32;UBERON:0004121,7.23e-18,171;UBERON:0000924,7.23e-18,171;UBERON:0006601,7.23e-18,171;UBERON:0002791,8.37e-18,32;UBERON:0001950,1.65e-16,20;UBERON:0000025,8.45e-16,192;UBERON:0000956,4.99e-15,25;UBERON:0000203,4.99e-15,25;UBERON:0000483,5.09e-13,306;UBERON:0000119,1.44e-12,309;UBERON:0003076,4.41e-10,15;UBERON:0003057,4.41e-10,15;UBERON:0004732,3.81e-08,13;UBERON:0004733,6.77e-08,12;UBERON:0002028,6.77e-08,12;UBERON:0007277,6.77e-08,12;UBERON:0007625,1.14e-07,11;UBERON:0001871,2.40e-07,6;UBERON:0000020,7.70e-07,24;UBERON:0001032,7.70e-07,24;UBERON:0004456,7.70e-07,24 | |||
|phase1_expression=1.09007027562334,0.214100523890983,0.845726424575827,0,0,0,0,0,0,0,0,0,0,5.19818682432196,9.27912652038164,0,0,0.730310090387373,0,0.246242116153576,1.83600622119828,2.5076377718247,0,0,0.251085279189606,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.895037932904712,1.80719576192283,0.50133791063589,0,0.795285947051099,0,11.3441780596881,18.6252693868554,55.9507584865213,3.40545596294053,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,1.69592382577203,0,1.10047216776027,3.34391946458897,3.87625138753993,5.33649394030065,38.8275910807018,18.5301485870208,86.6710200519104,116.661663508025,2.94130464276695,17.012980905517,0,0,0,0,0,0,0,0,0,25.3455695364612,0,0,2.0078563452417,1.41867352879343,0,0,0.24666754841716,0.311211035399766,1.0776853765575,0,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0,0.206651562351531,0,0,0,0,0,0,0,0.438977620880838,0,0,0.680593098960126,9.32826105582082,1.70845911054854,0,1.80054657650641,0.412210116953756,6.1833729610951,1.30281799432113,0,0,0.504867548488229,0,0.161646056818812,0.710019185033229,0,1.01736355386293,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,3.85944562915731,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,1.26755034821831,7.86261773342101,81.5290071220338,0,0,10.4656364282101,0,0,0,0,0,0,7.21656710126366,3.4779121492523,27.4736344511823,82.0001423282899,56.9472180469231,107.683850164783,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0.22001485746285,0.904902010304444,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32997005335432,0.410952645100767,0.179060963239896,0,0,0,0,0,9.10978977003352,3.09315525111078,4.69045542936177,3.18969375826582,0,0,0,6.13457458595699,21.0071618845064,4.06897535549603,1.66376689224646,0.892144943985809,0.315404830067869,0.35142424497814,0,0,0,0,0.737476674166813,0,0.195801157462741,0,0,0,0,0,0,0.30239029332968,1.48864684691266,0.920771839728375,0,5.38184426873944,0.511707249066704,0.321707842287215,0,0,0,0.328508624055237,1.55776328755086,0.232420756919918,0,0,0,0.114814448164607,0.728364672026868,3.2781103739856,0.902399225814824,0.770153371044148,0.784349769176855,1.46139224653261,0.844413031143006,4.54933536283586,0.170093705276516,2.37507507712353,16.9649977959318,1.35473218771926,1.50506932156456,0,0,0.223874754722178,0.877039506583738,0.261435451024901,3.07740150139667,0.984043937099117,13.0151357865721,21.9477354809648,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,1.5740617341532,0,0.924100740528266,0,0,0.74129687641568,0,0.372158369359667,0.316379424718726,0.190630193923825,0,0.42793898803392,0.95460974377781,0,0,0,0,0,0,0,0,0,1.05650146756755,9.82799362137497,1.97967604735198,1.13008116620243,0,0.66343897524122,3.94605796728386,0,0,0.202910376962704,0.6196469961995,0.281695602532241,0.286822704408103,0.196498082026242,0.35667105148125,5.32141596105897,0.211107635297664,0,0,0,0,0.670302275535787,0,18.8287601553558,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.6967075580392,1.35227839237992,0,0,0,2.63714722689409,0,0,0,0.23874448473769,0.296964680832639,0,18.8888053075597,17.3023382184931,1.44701316529778,0,0,5.18044769452781,2.48655523978033,0,0,0,0.311039587661807,0,0,0,6.41182136640068,0,0,28.1106496367613,7.6069840492718,25.9497937401552,0,0,2.17499872630438,0,0,0,5.17115059862197,0,1.56262495439963,5.31444831488303,8.20055782652774,105.281398058787,151.604165365709,194.174785652481,26.1068622613227,0,0,3.15496059865568,0,0,0,0,4.46601623624687,0,22.9204953688013,0,0,97.8986806391921,8.57263510345287,13.528314867924,15.4395860017775,1.3282761290693,0.158936578980379,26.7967541950594,0,0,0,6.96683351754953,3.62676014463691,8.55442202907076,2.07564790076435,0.617819694732514,0.626531697032732,3.03305098413047,14.4463976513782,4.45102446878144,0,0,0,1.18375320854817,25.4080503702194,29.995130639788,0.821425535170343,0,0,0,0,0.313932918407225,0,0,0,0.173559738335131,0,0,2.79562669187248,0,0,0,0,4.84945082442097,0,47.9079170454729,0,2.78200456384186,13.2319563547786,0,0,6.83049583165928,0,0,0,0,0,0.372757606696298,0,0,0,0,0,1.80126086612937,0.958337652243951,0,0,0,7.54062483435086,3.89572720819862,1.43574604915363,1.19807400299395,1.71690419254628,2.23171457441873,9.00258531322132,1.08089965062721,0,64.3658599450017,60.2459924766327,62.4156816089752,0,0,11.1332156573302,17.5702393883933,0,0,0,0,0,18.6501138940136,0,0.630445658393585,3.61936658131487,0,3.40645944732405,0,15.0086018538407,3.31045985182716,0,11.402991636828,0.864221491201268,3.91904832131291,5.98650957812437,3.44788587147224,0.511164065356265,0,29.6035512029727,83.4793400146994,5.30060121082357,3.83474545053801,0,0,1.388236363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| ||
|short_description=p1@RELN | |short_description=p1@RELN | ||
}} | }} |
Latest revision as of 20:04, 24 September 2015
Short description: | p1@RELN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RELN_5end |
Coexpression cluster: | C2873_cerebellum_pineal_mesothelioma_Endothelial_Lymphatic_merkel_chronic |
Association with transcript: | -133bp_to_ENST00000343529, ENST00000424685, ENST00000424828, ENST00000428762, ENST00000448171, NM_005045, NM_173054, uc003vca.2, uc010liz.2_5end |
EntrezGene: | RELN |
HGNC: | 9957 |
UniProt: | P78509F8WF74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data