FFCP PHASE1:Hg19::chr9:101471113..101471122,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9568 | |EntrezGene=9568 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4507 | |HGNC=4507 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=52bp_to_uc004ays.2_5end | |association_with_transcript=52bp_to_uc004ays.2_5end | ||
|cluster_id=chr9:101471113..101471122,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_7_at_GABBR2_5end | |description=CAGE_peak_7_at_GABBR2_5end | ||
|id=chr9:101471113..101471122,- | |id=chr9:101471113..101471122,- | ||
|ontology_enrichment_celltype=CL:0000071!1.96e-07!18;CL:0002546!1.96e-07!18 | |ontology_enrichment_celltype=CL:0000071!1.96e-07!18;CL:0002546!1.96e-07!18 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.53e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.08e-53!57;UBERON:0005068!2.08e-53!57;UBERON:0006241!2.08e-53!57;UBERON:0007135!2.08e-53!57;UBERON:0002616!2.42e-48!59;UBERON:0002780!3.07e-47!41;UBERON:0001890!3.07e-47!41;UBERON:0006240!3.07e-47!41;UBERON:0001893!4.54e-47!34;UBERON:0002020!4.99e-47!34;UBERON:0003528!4.99e-47!34;UBERON:0000955!6.92e-47!69;UBERON:0006238!6.92e-47!69;UBERON:0001869!1.26e-46!32;UBERON:0002619!5.41e-46!22;UBERON:0003080!6.33e-46!42;UBERON:0002791!9.68e-45!33;UBERON:0000956!9.48e-44!25;UBERON:0000203!9.48e-44!25;UBERON:0001017!2.54e-42!82;UBERON:0005743!7.78e-42!86;UBERON:0001950!1.38e-41!20;UBERON:0000073!8.67e-37!94;UBERON:0001016!8.67e-37!94;UBERON:0003075!1.01e-35!86;UBERON:0007284!1.01e-35!86;UBERON:0002346!1.23e-33!90;UBERON:0003056!4.78e-31!61;UBERON:0007023!2.25e-27!115;UBERON:0000033!1.06e-25!123;UBERON:0000025!2.52e-24!194;UBERON:0000153!5.69e-24!129;UBERON:0007811!5.69e-24!129;UBERON:0004111!1.37e-18!241;UBERON:0000477!1.69e-17!286;UBERON:0004121!1.92e-16!169;UBERON:0000200!2.16e-16!6;UBERON:0000483!7.39e-16!309;UBERON:0000924!8.39e-16!173;UBERON:0006601!8.39e-16!173;UBERON:0001871!1.39e-15!7;UBERON:0000119!1.48e-15!312;UBERON:0001872!1.72e-13!5;UBERON:0000349!9.80e-13!5;UBERON:0003076!3.42e-09!15;UBERON:0003057!3.42e-09!15;UBERON:0000475!3.85e-09!365;UBERON:0004733!3.86e-09!12;UBERON:0002028!3.86e-09!12;UBERON:0007277!3.86e-09!12;UBERON:0002771!4.22e-09!3;UBERON:0002021!6.15e-09!5;UBERON:0000988!1.99e-08!3;UBERON:0004732!2.38e-08!13;UBERON:0000481!2.61e-08!347;UBERON:0000064!1.60e-07!219;UBERON:0001986!1.96e-07!18;UBERON:0004638!1.96e-07!18;UBERON:0004852!1.96e-07!18;UBERON:0000487!2.62e-07!22;UBERON:0002298!3.05e-07!8;UBERON:0002680!4.47e-07!9;UBERON:0001895!4.47e-07!9;UBERON:0010092!4.47e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!2.08e-53!57;UBERON:0005068!2.08e-53!57;UBERON:0006241!2.08e-53!57;UBERON:0007135!2.08e-53!57;UBERON:0002616!2.42e-48!59;UBERON:0002780!3.07e-47!41;UBERON:0001890!3.07e-47!41;UBERON:0006240!3.07e-47!41;UBERON:0001893!4.54e-47!34;UBERON:0002020!4.99e-47!34;UBERON:0003528!4.99e-47!34;UBERON:0000955!6.92e-47!69;UBERON:0006238!6.92e-47!69;UBERON:0001869!1.26e-46!32;UBERON:0002619!5.41e-46!22;UBERON:0003080!6.33e-46!42;UBERON:0002791!9.68e-45!33;UBERON:0000956!9.48e-44!25;UBERON:0000203!9.48e-44!25;UBERON:0001017!2.54e-42!82;UBERON:0005743!7.78e-42!86;UBERON:0001950!1.38e-41!20;UBERON:0000073!8.67e-37!94;UBERON:0001016!8.67e-37!94;UBERON:0003075!1.01e-35!86;UBERON:0007284!1.01e-35!86;UBERON:0002346!1.23e-33!90;UBERON:0003056!4.78e-31!61;UBERON:0007023!2.25e-27!115;UBERON:0000033!1.06e-25!123;UBERON:0000025!2.52e-24!194;UBERON:0000153!5.69e-24!129;UBERON:0007811!5.69e-24!129;UBERON:0004111!1.37e-18!241;UBERON:0000477!1.69e-17!286;UBERON:0004121!1.92e-16!169;UBERON:0000200!2.16e-16!6;UBERON:0000483!7.39e-16!309;UBERON:0000924!8.39e-16!173;UBERON:0006601!8.39e-16!173;UBERON:0001871!1.39e-15!7;UBERON:0000119!1.48e-15!312;UBERON:0001872!1.72e-13!5;UBERON:0000349!9.80e-13!5;UBERON:0003076!3.42e-09!15;UBERON:0003057!3.42e-09!15;UBERON:0000475!3.85e-09!365;UBERON:0004733!3.86e-09!12;UBERON:0002028!3.86e-09!12;UBERON:0007277!3.86e-09!12;UBERON:0002771!4.22e-09!3;UBERON:0002021!6.15e-09!5;UBERON:0000988!1.99e-08!3;UBERON:0004732!2.38e-08!13;UBERON:0000481!2.61e-08!347;UBERON:0000064!1.60e-07!219;UBERON:0001986!1.96e-07!18;UBERON:0004638!1.96e-07!18;UBERON:0004852!1.96e-07!18;UBERON:0000487!2.62e-07!22;UBERON:0002298!3.05e-07!8;UBERON:0002680!4.47e-07!9;UBERON:0001895!4.47e-07!9;UBERON:0010092!4.47e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.41e-86;20!UBERON:0002619;7.66e-79;22!UBERON:0000956;1.81e-69;25!UBERON:0000203;1.81e-69;25!UBERON:0001869;1.87e-62;32!UBERON:0001893;4.67e-60;34!UBERON:0002791;1.71e-54;32!UBERON:0003528;2.28e-51;34!UBERON:0002020;2.28e-51;34!UBERON:0000200;2.28e-49;6!UBERON:0002780;6.55e-36;41!UBERON:0001890;6.55e-36;41!UBERON:0001872;1.17e-26;5!UBERON:0000073;1.60e-26;53!UBERON:0002616;1.60e-26;53!UBERON:0000955;1.31e-25;68!UBERON:0001870;2.20e-25;3!UBERON:0001871;1.32e-19;6!UBERON:0002771;5.98e-18;2!UBERON:0001017;6.81e-18;75!UBERON:0002702;1.58e-17;2!UBERON:0002021;4.80e-16;5!UBERON:0001016;5.09e-13;83!UBERON:0002581;1.25e-09;1!UBERON:0002902;1.25e-09;1!UBERON:0001882;1.25e-09;1!UBERON:0002022;1.25e-09;1!UBERON:0003112;1.25e-09;1!UBERON:0011158;1.25e-09;1!UBERON:0009899;1.25e-09;1!UBERON:0007190;1.25e-09;1!UBERON:0003128;1.25e-09;1!UBERON:0005403;1.25e-09;1!UBERON:0001703;1.25e-09;1!UBERON:0002241;1.25e-09;1!UBERON:0007023;1.01e-07;114!UBERON:0000349;1.50e-07;5!UBERON:0011216;1.57e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.93e-87,20;UBERON:0002619,2.39e-79,22;UBERON:0001869,3.15e-70,32;UBERON:0000956,6.48e-70,25;UBERON:0000203,6.48e-70,25;UBERON:0001893,4.64e-66,34;UBERON:0002791,5.10e-62,32;UBERON:0003528,2.51e-58,34;UBERON:0002020,2.51e-58,34;UBERON:0002780,1.37e-54,41;UBERON:0001890,1.37e-54,41;UBERON:0003080,1.37e-54,41;UBERON:0006240,1.37e-54,41;UBERON:0000200,3.46e-50,6;UBERON:0000073,3.40e-47,53;UBERON:0002616,3.40e-47,53;UBERON:0000955,1.34e-44,68;UBERON:0006238,1.34e-44,68;UBERON:0001049,1.48e-44,56;UBERON:0005068,1.48e-44,56;UBERON:0006241,1.48e-44,56;UBERON:0007135,1.48e-44,56;UBERON:0001017,4.07e-37,81;UBERON:0003056,4.50e-36,61;UBERON:0001016,3.58e-33,89;UBERON:0003075,1.16e-29,82;UBERON:0007284,1.16e-29,82;UBERON:0002346,3.68e-28,86;UBERON:0001872,6.01e-27,5;UBERON:0007023,4.23e-26,114;UBERON:0001870,1.58e-25,3;UBERON:0010371,8.26e-23,104;UBERON:0001871,5.85e-20,6;UBERON:0010314,1.57e-19,132;UBERON:0002771,2.90e-18,2;UBERON:0002702,1.04e-17,2;UBERON:0004121,5.55e-16,171;UBERON:0000924,5.55e-16,171;UBERON:0006601,5.55e-16,171;UBERON:0002021,5.76e-16,5;UBERON:0011216,2.29e-14,223;UBERON:0000025,5.23e-14,192;UBERON:0004111,1.56e-10,240;UBERON:0007190,8.17e-10,1;UBERON:0002581,8.91e-10,1;UBERON:0002902,1.76e-09,1;UBERON:0009899,1.76e-09,1;UBERON:0003112,1.91e-09,1;UBERON:0011158,1.91e-09,1;UBERON:0003128,1.91e-09,1;UBERON:0001703,1.91e-09,1;UBERON:0002241,1.91e-09,1;UBERON:0004761,1.91e-09,1;UBERON:0009617,1.91e-09,1;UBERON:0002022,2.08e-09,1;UBERON:0001882,2.67e-09,1;UBERON:0005403,2.67e-09,1;UBERON:0000349,1.50e-07,5;UBERON:0000483,1.63e-07,306;UBERON:0000119,2.08e-07,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0.550236083880135,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0.337834441449967,1.53316637465883,0,0.916008719652036,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0.309157587715317,0,0,0,0.194874010322397,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,1.10273068709225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.281338832821026,0.333926115068718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,1.66982576691332,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.663475559587348,2.06883333267483,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,1.64608069485285,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,1.39723980313457,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.79339561045614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.95242023843141,1.752673029891,0,0.110929051536852,0.124192805882767,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706756583783524,0,0,0,0,0,2.35039341457942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09189682663981,4.25089728976755,0.478901577171454,2.2562800066483,0,1.52145955421279,1.45328081068666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82351478469666,1.56215619722769,1.65349437200947,1.96589011601111,0.546974809018219,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0,0,0,0.951576261675644,1.77586488619693,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10773619591836,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560659312903067,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0.550236083880135,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0.337834441449967,1.53316637465883,0,0.916008719652036,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0.309157587715317,0,0,0,0.194874010322397,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,1.10273068709225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.281338832821026,0.333926115068718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,1.66982576691332,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.663475559587348,2.06883333267483,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,1.64608069485285,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,1.39723980313457,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.79339561045614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.95242023843141,1.752673029891,0,0.110929051536852,0.124192805882767,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706756583783524,0,0,0,0,0,2.35039341457942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09189682663981,4.25089728976755,0.478901577171454,2.2562800066483,0,1.52145955421279,1.45328081068666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82351478469666,1.56215619722769,1.65349437200947,1.96589011601111,0.546974809018219,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0,0,0,0.951576261675644,1.77586488619693,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10773619591836,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560659312903067,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@GABBR2 | |short_description=p7@GABBR2 | ||
}} | }} |
Latest revision as of 19:05, 19 September 2015
Short description: | p7@GABBR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GABBR2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 52bp_to_uc004ays.2_5end |
EntrezGene: | GABBR2 |
HGNC: | 4507 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data