FFCP PHASE1:Hg19::chr8:57358393..57358427,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5179 | |EntrezGene=5179 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8831 | |HGNC=8831 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-186bp_to_ENST00000523274_5end | |association_with_transcript=-186bp_to_ENST00000523274_5end | ||
|cluster_id=chr8:57358393..57358427,- | |||
|coexpression_cluster_id=C309 | |||
|description=CAGE_peak_2_at_PENK_5end | |description=CAGE_peak_2_at_PENK_5end | ||
|id=chr8:57358393..57358427,- | |id=chr8:57358393..57358427,- | ||
|ontology_enrichment_celltype=CL:0000153!2.80e-12!9;CL:0000447!2.80e-12!9;CL:0000667!3.38e-10!6;CL:0000058!3.38e-10!6;CL:0000138!3.38e-10!6;CL:0000499!5.51e-08!27;CL:0000135!7.94e-08!3;CL:0000386!7.94e-08!3;CL:0000388!7.94e-08!3;CL:0000057!1.96e-07!75;CL:0000327!2.17e-07!14;CL:0002552!3.90e-07!5;CL:0000055!6.47e-07!180 | |ontology_enrichment_celltype=CL:0000153!2.80e-12!9;CL:0000447!2.80e-12!9;CL:0000667!3.38e-10!6;CL:0000058!3.38e-10!6;CL:0000138!3.38e-10!6;CL:0000499!5.51e-08!27;CL:0000135!7.94e-08!3;CL:0000386!7.94e-08!3;CL:0000388!7.94e-08!3;CL:0000057!1.96e-07!75;CL:0000327!2.17e-07!14;CL:0002552!3.90e-07!5;CL:0000055!6.47e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000138;2.51e-28;6!CL:0000153;1.17e-26;9!CL:0000447;1.17e-26;9!CL:0000135;2.69e-20;3!CL:0000388;2.69e-20;3!CL:0000499;6.34e-18;28!CL:0000327;8.61e-16;15!CL:0002552;5.20e-12;5!CL:0002556;1.27e-10;6!CL:0002540;4.15e-10;6!CL:0000062;6.48e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,2.58e-28,6;CL:0000138,2.58e-28,6;CL:0000153,1.25e-26,9;CL:0000447,1.25e-26,9;CL:0000135,2.44e-20,3;CL:0000388,2.44e-20,3;CL:0000499,6.35e-18,28;CL:0000327,8.95e-16,15;CL:0002552,4.47e-12,5;CL:0002556,1.27e-10,6;CL:0002540,4.29e-10,6 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.70e-08;1!UBERON:0003852;2.70e-08;1!UBERON:0006222;9.40e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009663!8.60e-11!7;UBERON:0002308!1.05e-10!9;UBERON:0000125!1.05e-10!9;UBERON:0000369!3.06e-09!4;UBERON:0002435!3.06e-09!4;UBERON:0000204!3.06e-09!4;UBERON:0010082!3.06e-09!4;UBERON:0002420!3.42e-08!9;UBERON:0007245!3.42e-08!9;UBERON:0010009!3.42e-08!9;UBERON:0010011!3.42e-08!9;UBERON:0000454!3.42e-08!9;UBERON:0001017!7.54e-08!82;UBERON:0000043!7.94e-08!3;UBERON:0000073!1.59e-07!94;UBERON:0001016!1.59e-07!94;UBERON:0005383!1.81e-07!3;UBERON:0005382!1.81e-07!3;UBERON:0005743!3.16e-07!86;UBERON:0001049!3.19e-07!57;UBERON:0005068!3.19e-07!57;UBERON:0006241!3.19e-07!57;UBERON:0007135!3.19e-07!57 | |ontology_enrichment_uberon=UBERON:0009663!8.60e-11!7;UBERON:0002308!1.05e-10!9;UBERON:0000125!1.05e-10!9;UBERON:0000369!3.06e-09!4;UBERON:0002435!3.06e-09!4;UBERON:0000204!3.06e-09!4;UBERON:0010082!3.06e-09!4;UBERON:0002420!3.42e-08!9;UBERON:0007245!3.42e-08!9;UBERON:0010009!3.42e-08!9;UBERON:0010011!3.42e-08!9;UBERON:0000454!3.42e-08!9;UBERON:0001017!7.54e-08!82;UBERON:0000043!7.94e-08!3;UBERON:0000073!1.59e-07!94;UBERON:0001016!1.59e-07!94;UBERON:0005383!1.81e-07!3;UBERON:0005382!1.81e-07!3;UBERON:0005743!3.16e-07!86;UBERON:0001049!3.19e-07!57;UBERON:0005068!3.19e-07!57;UBERON:0006241!3.19e-07!57;UBERON:0007135!3.19e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.69e-20;3!UBERON:0000043;2.69e-20;3!UBERON:0007845;2.69e-20;3!UBERON:0001758;1.27e-10;6!UBERON:0003672;1.27e-10;6!UBERON:0011137;5.15e-10;11!UBERON:0010323;5.15e-10;11!UBERON:0005383;2.30e-09;3!UBERON:0005382;2.30e-09;3!UBERON:0001434;3.14e-09;36!UBERON:0003129;3.59e-09;7!UBERON:0009663;1.27e-08;7!UBERON:0005705;2.70e-08;1!UBERON:0008193;2.70e-08;1!UBERON:0010912;2.70e-08;1!UBERON:0002514;2.70e-08;1!UBERON:0003457;2.70e-08;1!UBERON:0008907;2.70e-08;1!UBERON:0008001;2.70e-08;1!UBERON:0007213;2.70e-08;1!UBERON:0009891;2.70e-08;1!UBERON:0007914;2.70e-08;1!UBERON:0007375;2.70e-08;1!UBERON:0003323;2.70e-08;1!UBERON:0010258;2.70e-08;1!UBERON:0005253;2.70e-08;1!UBERON:0007842;2.70e-08;1!UBERON:0002397;2.70e-08;1!UBERON:0003113;2.70e-08;1!UBERON:0003277;2.70e-08;1!UBERON:0001709;2.70e-08;1!UBERON:0002244;2.70e-08;1!UBERON:0005620;2.70e-08;1!UBERON:0010364;2.70e-08;1!UBERON:0004288;2.70e-08;1!UBERON:0000165;7.28e-08;28!UBERON:0001874;9.40e-08;1!UBERON:0001828;1.09e-07;8!UBERON:0000369;3.13e-07;4!UBERON:0002435;3.13e-07;4!UBERON:0000204;3.13e-07;4!UBERON:0000075;6.61e-07;16!UBERON:0002420;8.30e-07;9!UBERON:0000125;8.30e-07;9!UBERON:0007245;8.30e-07;9!UBERON:0002308;8.30e-07;9!UBERON:0010009;8.30e-07;9!UBERON:0010011;8.30e-07;9!UBERON:0000454;8.30e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.44e-20,3;UBERON:0000043,2.44e-20,3;UBERON:0007845,2.44e-20,3;UBERON:0001758,1.27e-10,6;UBERON:0003672,1.27e-10,6;UBERON:0000165,2.72e-10,29;UBERON:0000930,2.72e-10,29;UBERON:0010323,5.16e-10,11;UBERON:0005383,2.30e-09,3;UBERON:0005382,2.30e-09,3;UBERON:0003129,3.59e-09,7;UBERON:0009663,1.36e-08,7;UBERON:0005705,2.70e-08,1;UBERON:0008193,2.70e-08,1;UBERON:0010912,2.70e-08,1;UBERON:0002514,2.70e-08,1;UBERON:0003457,2.70e-08,1;UBERON:0008907,2.70e-08,1;UBERON:0008001,2.70e-08,1;UBERON:0007213,2.70e-08,1;UBERON:0009891,2.70e-08,1;UBERON:0007914,2.70e-08,1;UBERON:0009292,2.70e-08,1;UBERON:0003099,2.70e-08,1;UBERON:0007375,2.70e-08,1;UBERON:0003323,2.70e-08,1;UBERON:0010258,2.70e-08,1;UBERON:0007842,2.70e-08,1;UBERON:0009494,2.70e-08,1;UBERON:0010042,2.70e-08,1;UBERON:0010045,2.70e-08,1;UBERON:0010259,2.70e-08,1;UBERON:0010359,2.70e-08,1;UBERON:0009526,2.70e-08,1;UBERON:0002397,2.70e-08,1;UBERON:0003113,2.70e-08,1;UBERON:0003277,2.70e-08,1;UBERON:0001709,2.70e-08,1;UBERON:0004066,2.70e-08,1;UBERON:0002244,2.70e-08,1;UBERON:0005620,2.70e-08,1;UBERON:0004362,2.70e-08,1;UBERON:0010364,2.70e-08,1;UBERON:0010046,2.70e-08,1;UBERON:0005868,2.70e-08,1;UBERON:0007238,2.70e-08,1;UBERON:0004288,2.70e-08,1;UBERON:0004068,2.70e-08,1;UBERON:0010334,2.70e-08,1;UBERON:0003852,2.70e-08,1;UBERON:0010253,2.70e-08,1;UBERON:0011137,6.94e-08,14;UBERON:0001828,9.93e-08,8;UBERON:0001874,1.04e-07,1;UBERON:0000369,3.13e-07,4;UBERON:0002435,3.13e-07,4;UBERON:0000204,3.13e-07,4;UBERON:0010082,3.13e-07,4;UBERON:0000075,6.61e-07,16;UBERON:0002420,8.73e-07,9;UBERON:0000125,8.73e-07,9;UBERON:0007245,8.73e-07,9;UBERON:0002308,8.73e-07,9;UBERON:0010009,8.73e-07,9;UBERON:0010011,8.73e-07,9;UBERON:0000454,8.73e-07,9 | |||
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|short_description=p2@PENK | |short_description=p2@PENK | ||
}} | }} |
Latest revision as of 14:23, 18 September 2015
Short description: | p2@PENK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PENK_5end |
Coexpression cluster: | C309_normal_Chondrocyte_small_Fibroblast_tenocyte_neuroepithelioma_Osteoblast |
Association with transcript: | -186bp_to_ENST00000523274_5end |
EntrezGene: | PENK |
HGNC: | 8831 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 2.58e-28 | 6 |
chondrocyte | 2.58e-28 | 6 |
GAG secreting cell | 1.25e-26 | 9 |
carbohydrate secreting cell | 1.25e-26 | 9 |
fibrocyte | 2.44e-20 | 3 |
tendon cell | 2.44e-20 | 3 |
stromal cell | 6.35e-18 | 28 |
extracellular matrix secreting cell | 8.95e-16 | 15 |
fibroblast of gingiva | 4.47e-12 | 5 |
fibroblast of periodontium | 1.27e-10 | 6 |
mesenchymal stem cell of the bone marrow | 4.29e-10 | 6 |