FFCP PHASE1:Hg19::chr15:90744745..90744807,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10509 | |EntrezGene=10509 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10730 | |HGNC=10730 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000558051_5end | |association_with_transcript=0bp_to_ENST00000558051_5end | ||
|cluster_id=chr15:90744745..90744807,+ | |||
|description=CAGE_peak_3_at_SEMA4B_5end | |description=CAGE_peak_3_at_SEMA4B_5end | ||
|id=chr15:90744745..90744807,+ | |id=chr15:90744745..90744807,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.75e-22!254;CL:0002076!4.12e-13!43;CL:0000223!6.83e-12!59;CL:0002368!4.32e-08!13 | |ontology_enrichment_celltype=CL:0000066!3.75e-22!254;CL:0002076!4.12e-13!43;CL:0000223!6.83e-12!59;CL:0002368!4.32e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.14e-10;42!CL:0002368;7.31e-09;13!CL:1000507;9.31e-08;10!CL:1000494;9.31e-08;10!CL:1000497;2.23e-07;17!CL:0002518;2.23e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.42e-20,253;CL:0002076,5.32e-14,42;CL:0000223,8.23e-12,58;CL:0002368,9.33e-09,13;CL:1000507,9.81e-08,10;CL:1000494,9.81e-08,10;CL:1000497,1.62e-07,17;CL:0002518,1.62e-07,17;CL:1000449,7.93e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.25e-12!106;DOID:0050687!1.64e-09!143 | |ontology_enrichment_disease=DOID:305!3.25e-12!106;DOID:0050687!1.64e-09!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.11e-11,106;DOID:0050687,2.89e-07,143 | |||
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|ontology_enrichment_uberon_v019=UBERON:0006554;7.77e-10;30!UBERON:0001008;7.77e-10;30!UBERON:0000489;1.43e-08;29!UBERON:0004211;9.31e-08;10!UBERON:0009773;9.31e-08;10!UBERON:0001231;9.31e-08;10!UBERON:0004810;9.31e-08;10!UBERON:0003528;2.64e-07;34!UBERON:0002020;2.64e-07;34!UBERON:0001893;4.47e-07;34!UBERON:0002791;5.62e-07;32!UBERON:0002619;5.65e-07;22!UBERON:0001869;6.81e-07;32!UBERON:0000073;8.05e-07;53!UBERON:0002616;8.05e-07;53 | |||
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| ||
|short_description=p3@SEMA4B | |short_description=p3@SEMA4B | ||
}} | }} |
Latest revision as of 19:22, 19 September 2015
Short description: | p3@SEMA4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SEMA4B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000558051_5end |
EntrezGene: | SEMA4B |
HGNC: | 10730 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.42e-20 | 253 |
endo-epithelial cell | 5.32e-14 | 42 |
endodermal cell | 8.23e-12 | 58 |
respiratory epithelial cell | 9.33e-09 | 13 |
kidney tubule cell | 9.81e-08 | 10 |
nephron tubule epithelial cell | 9.81e-08 | 10 |
kidney cell | 1.62e-07 | 17 |
kidney epithelial cell | 1.62e-07 | 17 |
epithelial cell of nephron | 7.93e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.11e-11 | 106 |
cell type cancer | 2.89e-07 | 143 |