FFCP PHASE1:Hg19::chr1:75600318..75600329,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=431707 | |EntrezGene=431707 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28838 | |HGNC=28838 | ||
|TSSclassifier=strong | |||
|UniProt=E9PGE3 | |UniProt=E9PGE3 | ||
|association_with_transcript=-237bp_to_ENST00000356261,uc001dgq.2_5end | |association_with_transcript=-237bp_to_ENST00000356261,uc001dgq.2_5end | ||
|cluster_id=chr1:75600318..75600329,+ | |||
|coexpression_cluster_id=C53 | |coexpression_cluster_id=C53 | ||
|description=CAGE_peak_4_at_LHX8_5end | |description=CAGE_peak_4_at_LHX8_5end | ||
|id=chr1:75600318..75600329,+ | |id=chr1:75600318..75600329,+ | ||
|ontology_enrichment_celltype=CL:0002556!1.09e-33!6;CL:0002552!7.01e-29!5;CL:0000057!6.96e-16!75;CL:0002617!2.64e-12!2;CL:0000055!4.30e-08!180;CL:0002550!6.76e-07!1 | |ontology_enrichment_celltype=CL:0002556!1.09e-33!6;CL:0002552!7.01e-29!5;CL:0000057!6.96e-16!75;CL:0002617!2.64e-12!2;CL:0000055!4.30e-08!180;CL:0002550!6.76e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002552;4.65e-40;5!CL:0002556;1.41e-15;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,6.50e-40,5;CL:0002556,1.31e-15,6;CL:0000057,2.19e-07,76 | |||
|ontology_enrichment_development_v019=UBERON:0003099;3.67e-23;1!UBERON:0003852;3.67e-23;1!UBERON:0005062;8.85e-07;4!UBERON:0007284;8.85e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001758!1.09e-33!6;UBERON:0003672!1.09e-33!6;UBERON:0000165!6.41e-27!28;UBERON:0000930!6.41e-27!28;UBERON:0003129!1.09e-24!11;UBERON:0000075!9.30e-21!13;UBERON:0005944!9.30e-21!13;UBERON:0004288!9.30e-21!13;UBERON:0003089!9.30e-21!13;UBERON:0009663!1.84e-19!7;UBERON:0000033!7.53e-19!123;UBERON:0001828!5.46e-18!8;UBERON:0000153!9.24e-18!129;UBERON:0007811!9.24e-18!129;UBERON:0001444!1.91e-17!48;UBERON:0002308!4.20e-15!9;UBERON:0002420!4.20e-15!9;UBERON:0000125!4.20e-15!9;UBERON:0007245!4.20e-15!9;UBERON:0010009!4.20e-15!9;UBERON:0010011!4.20e-15!9;UBERON:0000454!4.20e-15!9;UBERON:0000078!1.52e-14!18;UBERON:0000369!8.65e-13!4;UBERON:0002435!8.65e-13!4;UBERON:0000204!8.65e-13!4;UBERON:0010082!8.65e-13!4;UBERON:0004121!2.59e-12!169;UBERON:0001875!3.31e-12!2;UBERON:0006514!3.31e-12!2;UBERON:0000924!6.35e-12!173;UBERON:0006601!6.35e-12!173;UBERON:0003102!3.09e-10!95;UBERON:0000166!2.71e-09!21;UBERON:0005383!2.70e-08!3;UBERON:0005382!2.70e-08!3;UBERON:0001282!2.22e-07!1;UBERON:0009842!2.22e-07!1;UBERON:0003704!2.22e-07!1;UBERON:0001171!2.22e-07!1;UBERON:0001172!2.22e-07!1;UBERON:0005705!2.66e-07!1;UBERON:0008193!2.66e-07!1;UBERON:0002514!2.66e-07!1;UBERON:0003462!2.66e-07!1;UBERON:0008001!2.66e-07!1;UBERON:0007914!2.66e-07!1;UBERON:0003457!2.66e-07!1;UBERON:0009292!2.66e-07!1;UBERON:0007375!2.66e-07!1;UBERON:0003323!2.66e-07!1;UBERON:0002397!2.66e-07!1;UBERON:0001709!2.66e-07!1;UBERON:0004066!2.66e-07!1;UBERON:0002244!2.66e-07!1;UBERON:0005620!2.66e-07!1;UBERON:0004068!2.66e-07!1;UBERON:0004362!2.66e-07!1;UBERON:0002780!3.76e-07!41;UBERON:0001890!3.76e-07!41;UBERON:0006240!3.76e-07!41;UBERON:0001874!4.51e-07!1;UBERON:0000475!4.84e-07!365;UBERON:0003080!5.86e-07!42;UBERON:0002372!9.51e-07!1;UBERON:0001961!9.51e-07!1;UBERON:0001744!9.51e-07!1;UBERON:0001735!9.51e-07!1 | |ontology_enrichment_uberon=UBERON:0001758!1.09e-33!6;UBERON:0003672!1.09e-33!6;UBERON:0000165!6.41e-27!28;UBERON:0000930!6.41e-27!28;UBERON:0003129!1.09e-24!11;UBERON:0000075!9.30e-21!13;UBERON:0005944!9.30e-21!13;UBERON:0004288!9.30e-21!13;UBERON:0003089!9.30e-21!13;UBERON:0009663!1.84e-19!7;UBERON:0000033!7.53e-19!123;UBERON:0001828!5.46e-18!8;UBERON:0000153!9.24e-18!129;UBERON:0007811!9.24e-18!129;UBERON:0001444!1.91e-17!48;UBERON:0002308!4.20e-15!9;UBERON:0002420!4.20e-15!9;UBERON:0000125!4.20e-15!9;UBERON:0007245!4.20e-15!9;UBERON:0010009!4.20e-15!9;UBERON:0010011!4.20e-15!9;UBERON:0000454!4.20e-15!9;UBERON:0000078!1.52e-14!18;UBERON:0000369!8.65e-13!4;UBERON:0002435!8.65e-13!4;UBERON:0000204!8.65e-13!4;UBERON:0010082!8.65e-13!4;UBERON:0004121!2.59e-12!169;UBERON:0001875!3.31e-12!2;UBERON:0006514!3.31e-12!2;UBERON:0000924!6.35e-12!173;UBERON:0006601!6.35e-12!173;UBERON:0003102!3.09e-10!95;UBERON:0000166!2.71e-09!21;UBERON:0005383!2.70e-08!3;UBERON:0005382!2.70e-08!3;UBERON:0001282!2.22e-07!1;UBERON:0009842!2.22e-07!1;UBERON:0003704!2.22e-07!1;UBERON:0001171!2.22e-07!1;UBERON:0001172!2.22e-07!1;UBERON:0005705!2.66e-07!1;UBERON:0008193!2.66e-07!1;UBERON:0002514!2.66e-07!1;UBERON:0003462!2.66e-07!1;UBERON:0008001!2.66e-07!1;UBERON:0007914!2.66e-07!1;UBERON:0003457!2.66e-07!1;UBERON:0009292!2.66e-07!1;UBERON:0007375!2.66e-07!1;UBERON:0003323!2.66e-07!1;UBERON:0002397!2.66e-07!1;UBERON:0001709!2.66e-07!1;UBERON:0004066!2.66e-07!1;UBERON:0002244!2.66e-07!1;UBERON:0005620!2.66e-07!1;UBERON:0004068!2.66e-07!1;UBERON:0004362!2.66e-07!1;UBERON:0002780!3.76e-07!41;UBERON:0001890!3.76e-07!41;UBERON:0006240!3.76e-07!41;UBERON:0001874!4.51e-07!1;UBERON:0000475!4.84e-07!365;UBERON:0003080!5.86e-07!42;UBERON:0002372!9.51e-07!1;UBERON:0001961!9.51e-07!1;UBERON:0001744!9.51e-07!1;UBERON:0001735!9.51e-07!1 | ||
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|short_description=p4@LHX8 | |short_description=p4@LHX8 | ||
}} | }} |
Latest revision as of 05:37, 19 September 2015
Short description: | p4@LHX8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LHX8_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | -237bp_to_ENST00000356261, uc001dgq.2_5end |
EntrezGene: | LHX8 |
HGNC: | 28838 |
UniProt: | E9PGE3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 6.50e-40 | 5 |
fibroblast of periodontium | 1.31e-15 | 6 |
fibroblast | 2.19e-07 | 76 |