FFCP PHASE1:Hg19::chr19:34112850..34112868,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:34112850..34112868,+
|short_description=p1@CHST8
|description=CAGE_peak_1_at_CHST8_5end
|association_with_transcript=0bp_to_ENST00000434302,NM_001127895,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64377 | |EntrezGene=64377 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15993 | |HGNC=15993 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2A9 | |UniProt=Q9H2A9 | ||
|association_with_transcript=0bp_to_ENST00000434302,NM_001127895,uc002nus.3,uc002nut.3_5end | |||
|cluster_id=chr19:34112850..34112868,+ | |||
|description=CAGE_peak_1_at_CHST8_5end | |||
|id=chr19:34112850..34112868,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.06e-08;7!CL:0000586;2.06e-08;7!CL:0002322;3.79e-08;5!CL:0000540;3.84e-08;6!CL:0000404;3.84e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.51e-08,7;CL:0000586,2.51e-08,7;CL:0002322,3.80e-08,5;CL:0000540,4.85e-08,6;CL:0000031,4.85e-08,6;CL:0000404,4.85e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.08e-12;82!CL:0000031;3.84e-08;6 | |||
|ontology_enrichment_disease=DOID:3095!1.09e-07!22;DOID:2994!1.09e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.07e-08;22!DOID:2994;3.07e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.65e-08,22;DOID:2994,3.65e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.67e-37!115;UBERON:0001017!1.42e-31!82;UBERON:0000073!1.63e-30!94;UBERON:0001016!1.63e-30!94;UBERON:0005743!8.33e-30!86;UBERON:0001049!9.61e-30!57;UBERON:0005068!9.61e-30!57;UBERON:0006241!9.61e-30!57;UBERON:0007135!9.61e-30!57;UBERON:0000955!4.43e-26!69;UBERON:0006238!4.43e-26!69;UBERON:0002616!5.31e-25!59;UBERON:0002346!8.70e-23!90;UBERON:0003075!4.52e-22!86;UBERON:0007284!4.52e-22!86;UBERON:0003080!4.72e-22!42;UBERON:0002780!2.24e-21!41;UBERON:0001890!2.24e-21!41;UBERON:0006240!2.24e-21!41;UBERON:0002020!3.08e-19!34;UBERON:0003528!3.08e-19!34;UBERON:0001893!4.71e-19!34;UBERON:0000924!8.32e-19!173;UBERON:0006601!8.32e-19!173;UBERON:0002791!2.09e-18!33;UBERON:0001869!4.15e-18!32;UBERON:0004121!4.75e-18!169;UBERON:0003056!1.14e-14!61;UBERON:0002619!1.34e-14!22;UBERON:0000956!1.55e-14!25;UBERON:0000203!1.55e-14!25;UBERON:0000033!5.89e-14!123;UBERON:0000153!7.36e-14!129;UBERON:0007811!7.36e-14!129;UBERON:0001950!2.08e-13!20;UBERON:0000468!5.78e-09!659;UBERON:0003076!8.55e-09!15;UBERON:0003057!8.55e-09!15;UBERON:0000025!1.40e-07!194;UBERON:0004732!1.43e-07!13;UBERON:0000064!5.73e-07!219;UBERON:0004733!6.61e-07!12;UBERON:0002028!6.61e-07!12;UBERON:0007277!6.61e-07!12;UBERON:0000475!7.28e-07!365;UBERON:0004111!9.94e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.08e-21;53!UBERON:0002616;4.08e-21;53!UBERON:0002619;5.83e-21;22!UBERON:0002791;6.95e-21;32!UBERON:0003528;8.18e-21;34!UBERON:0002020;8.18e-21;34!UBERON:0001869;1.03e-20;32!UBERON:0001893;1.03e-20;34!UBERON:0002780;1.32e-20;41!UBERON:0001890;1.32e-20;41!UBERON:0001950;4.81e-19;20!UBERON:0000956;1.14e-17;25!UBERON:0000203;1.14e-17;25!UBERON:0000955;3.11e-15;68!UBERON:0001017;1.18e-14;75!UBERON:0001016;2.59e-14;83!UBERON:0007023;6.65e-11;114!UBERON:0004732;1.31e-10;13!UBERON:0004733;1.49e-09;12!UBERON:0002028;1.49e-09;12!UBERON:0000125;7.97e-09;9!UBERON:0002308;7.97e-09;9!UBERON:0002420;1.96e-08;9!UBERON:0007245;1.96e-08;9!UBERON:0010009;1.96e-08;9!UBERON:0010011;1.96e-08;9!UBERON:0000454;1.96e-08;9!UBERON:0002298;5.83e-08;6!UBERON:0000922;8.11e-08;49!UBERON:0001871;8.57e-08;6!UBERON:0000200;3.22e-07;6!UBERON:0009663;8.14e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.53e-44,89;UBERON:0001017,1.38e-43,81;UBERON:0007023,1.55e-40,114;UBERON:0001049,7.66e-40,56;UBERON:0005068,7.66e-40,56;UBERON:0006241,7.66e-40,56;UBERON:0007135,7.66e-40,56;UBERON:0000073,1.14e-36,53;UBERON:0002616,1.14e-36,53;UBERON:0000955,4.20e-34,68;UBERON:0006238,4.20e-34,68;UBERON:0002346,6.96e-30,86;UBERON:0003075,2.61e-29,82;UBERON:0007284,2.61e-29,82;UBERON:0002780,3.06e-28,41;UBERON:0001890,3.06e-28,41;UBERON:0003080,3.06e-28,41;UBERON:0006240,3.06e-28,41;UBERON:0003528,2.71e-25,34;UBERON:0002020,2.71e-25,34;UBERON:0001893,5.09e-25,34;UBERON:0004121,1.89e-24,171;UBERON:0000924,1.89e-24,171;UBERON:0006601,1.89e-24,171;UBERON:0010371,1.23e-23,104;UBERON:0001869,1.71e-23,32;UBERON:0002791,2.87e-23,32;UBERON:0002619,4.36e-21,22;UBERON:0003056,4.51e-20,61;UBERON:0001950,3.67e-19,20;UBERON:0000956,8.87e-18,25;UBERON:0000203,8.87e-18,25;UBERON:0010314,1.63e-16,132;UBERON:0011216,9.44e-16,223;UBERON:0003076,1.53e-12,15;UBERON:0003057,1.53e-12,15;UBERON:0004732,1.40e-10,13;UBERON:0004733,1.60e-09,12;UBERON:0002028,1.60e-09,12;UBERON:0007277,1.60e-09,12;UBERON:0000125,4.80e-09,9;UBERON:0002308,4.80e-09,9;UBERON:0002420,1.01e-08,9;UBERON:0007245,1.01e-08,9;UBERON:0010009,1.01e-08,9;UBERON:0010011,1.01e-08,9;UBERON:0000454,1.01e-08,9;UBERON:0002298,5.63e-08,6;UBERON:0001871,6.47e-08,6;UBERON:0000922,1.26e-07,592;UBERON:0000200,3.36e-07,6;UBERON:0009663,5.11e-07,7;UBERON:0000025,6.97e-07,192 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.422863212287913,0,0.446961094427288,0,5.06599756336621,0,0.522371256399677,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0.369363174230364,0,1.25381888591235,0.572471974262113,0.136874425072884,0.502170558379211,0,0,0,0,0.383829398097213,0.309632246632152,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0.574752439954483,0.661044872784862,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0.221729397462564,0.175669571386252,0.392937226493138,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0.198762407366705,0,0,1.13061588384802,0,0.275118041940067,0.417989933073621,0,0,0,0,0,0,0.367663080345869,0.81014194788176,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0,0.354668382198357,0,1.06748995729705,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0,0.245668634623536,1.23990937410919,0,0,0.910161361938026,0,0,0,0.277064115484183,0,0,0.150238058906597,0.226864366320042,0.538168907066586,0,0,0.900273288253207,0.103052529238439,0.257640540045629,0,0.843881661206331,0.876933046450788,1.26216887122057,0,0,0.710019185033229,0.201504196455281,0.169560592310488,0.193260853163297,0,0,64.4021168364264,35.1203886051936,51.3577227483271,33.8971649900261,46.4270365611156,16.4239811584123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,7.90204397959275,8.58486162094873,0,0,0,0,0.335964256397719,0,0.447792613514241,1.16253575405585,0.383382679165211,0,0.44024217006613,28.8186080601673,23.9239122672156,24.7435169515705,0.253991577168676,0,0,0,0.102827492703324,1.50171528921959,0.285826432630578,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,1.58390374586686,0.602878754119172,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,6.18631050222156,2.01019518401218,5.10351001322531,2.24702107184155,0,1.24324654030811,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0.862856803274467,0,12.1251028578504,0,1.20956117331872,0,0.153461973288062,0,0.896974044789907,0,0.160853921143607,0,0.154209693802656,1.24293207719189,0.246381468041427,0,2.09178681227927,0.362578348774867,0.40101294060657,1.38121483403844,0,0.182091168006717,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0.290033387828457,0,0.0890320356467374,0,0.768760269460425,0.765676274967505,0.4046311234222,0,0.62962469366128,0,0,0,0,0.9266210955196,0,0,0,0,0,0,0.318203247925937,0.78494864019923,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0.202910376962704,0,0,0.286822704408103,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0.670302275535787,0,0.188287601553558,0,0,0,0,2.02979043692868,1.52927441428475,1.70894156152249,1.66762242820452,0.411362273086194,1.29694662238543,2.16012574895246,4.75875105776562,0.106824071127473,3.84991942105343,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,1.75809815126273,1.21360521749513,0,0,0.71623345421307,1.18785872333055,0,3.97659059106519,2.81338832821025,0.111308705022906,0,8.23389091699175,1.39473591775749,3.31540698637377,2.51932747854276,33.6463965432089,0,0,0,0.537063524026827,0,0.197286811273867,11.974154617347,0,3.87733098438087,3.9890282209596,31.9382076801911,7.55240507147176,1.48681999993533,10.8749936315219,0.1137934482855,0,0,19.305628901522,1.45802306691627,19.619624427462,2.65722415744152,3.13550740426061,13.7323562685375,26.2072846037002,34.8746190365186,4.8264787373874,0,1.25481369850743,1.69290568708354,0.797594390929008,1.38338342632836,3.14151755434202,1.3037684630641,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0.317873157960757,0,0.652931232636591,0.141353071433941,0,0,0.530745387020035,0.611030144933625,0.296521128680622,0.370691816839509,0.313265848516366,2.02203398942031,1.60515529459758,6.79366892603483,0,0,0,0,2.41981432097328,14.997565319894,2.96976924253893,26.6072452363652,4.56228042147887,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.484945082442097,0.882561266915003,4.06765333404958,0.137041924646751,0.19871461170299,3.48209377757333,5.08433595110488,0.0801588202515337,2.56143593687223,0,1.00863292007874,0,0.343189995723929,0,0,4.47818665771911,0,0,1.93796613509011,0,1.80126086612937,2.32739144116388,0,0,0,0.279282401272254,0,1.43574604915363,2.39614800598789,1.71690419254628,0.89268582976749,0.53746777989381,0,0,0,0,0,0.393709926058995,0,5.56660782866512,4.63091580779357,27.8102946844483,43.3249225281286,39.4668321127726,0,3.86900977278975,3.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| ||
|short_description=p1@CHST8 | |||
}} | }} |
Latest revision as of 07:06, 17 September 2015
Short description: | p1@CHST8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHST8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000434302, NM_001127895, uc002nus.3, uc002nut.3_5end |
EntrezGene: | CHST8 |
HGNC: | 15993 |
UniProt: | Q9H2A9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.51e-08 | 7 |
germ cell | 2.51e-08 | 7 |
embryonic stem cell | 3.80e-08 | 5 |
neuron | 4.85e-08 | 6 |
neuroblast | 4.85e-08 | 6 |
electrically signaling cell | 4.85e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.65e-08 | 22 |
germ cell cancer | 3.65e-08 | 22 |