FFCP PHASE1:Hg19::chr2:175711924..175711944,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1123 | |EntrezGene=1123 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1943 | |HGNC=1943 | ||
|TSSclassifier=strong | |||
|UniProt=C9J1N1 | |UniProt=C9J1N1 | ||
|association_with_transcript=0bp_to_ENST00000444573_5end | |association_with_transcript=0bp_to_ENST00000444573_5end | ||
|cluster_id=chr2:175711924..175711944,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_7_at_CHN1_5end | |description=CAGE_peak_7_at_CHN1_5end | ||
|id=chr2:175711924..175711944,- | |id=chr2:175711924..175711944,- | ||
|ontology_enrichment_celltype=CL:0002620;4.23e-14;23 | |ontology_enrichment_celltype=CL:0002620!1.19e-11!23;CL:0000057!5.45e-11!75;CL:0000055!1.88e-07!180;CL:0002334!1.88e-07!12 | ||
| | |ontology_enrichment_celltype_v019=CL:0002620;4.23e-14;23 | ||
|ontology_enrichment_disease=DOID:17;6.25e-08;5!DOID:450;6.25e-08;5!DOID:66;6.25e-08;5!DOID:423;6.25e-08;5!DOID:0080000;6.25e-08;5!DOID:11722;6.25e-08;5 | |ontology_enrichment_celltype_v019_2=CL:0002620,3.42e-14,23;CL:0000057,7.11e-11,76 | ||
|ontology_enrichment_uberon=UBERON:0001869;4.45e-43;32!UBERON:0001893;8.39e-43;34!UBERON:0002791;6.41e-40;32!UBERON:0003528;2.53e-39;34!UBERON:0002020;2.53e-39;34!UBERON:0002619;7.71e-38;22!UBERON:0000956;3.57e-36;25!UBERON:0000203;3.57e-36;25!UBERON:0002780;7.14e-34;41!UBERON:0001890;7.14e-34;41!UBERON:0001950;1.51e-33;20!UBERON:0000073;1.21e-30;53!UBERON:0002616;1.21e-30;53!UBERON:0000955;2.38e-21;68!UBERON:0001017;3.68e-21;75!UBERON:0000200;2.80e-16;6!UBERON:0002420;6.36e-14;9!UBERON:0007245;6.36e-14;9!UBERON:0010009;6.36e-14;9!UBERON:0010011;6.36e-14;9!UBERON:0000454;6.36e-14;9!UBERON:0001016;1.30e-13;83!UBERON:0000349;3.54e-13;5!UBERON:0000369;2.54e-11;4!UBERON:0002435;2.54e-11;4!UBERON:0000204;2.54e-11;4!UBERON:0000125;6.07e-10;9!UBERON:0002308;6.07e-10;9!UBERON:0001871;1.44e-09;6!UBERON:0009663;1.58e-09;7!UBERON:0001870;4.60e-09;3!UBERON:0001872;4.96e-09;5!UBERON:0007023;5.05e-09;114!UBERON:0002021;5.94e-09;5!UBERON:0005383;6.87e-09;3!UBERON:0005382;6.87e-09;3!UBERON:0004733;9.51e-09;12!UBERON:0002028;9.51e-09;12!UBERON:0004732;5.42e-08;13!UBERON:0002097;2.26e-07;41!UBERON:0011216;2.58e-07;132 | |ontology_enrichment_development_v019=UBERON:0006601;4.73e-09;82!UBERON:0006215;4.92e-08;3 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;6.25e-08;5!DOID:450;6.25e-08;5!DOID:66;6.25e-08;5!DOID:423;6.25e-08;5!DOID:0080000;6.25e-08;5!DOID:11722;6.25e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.22e-08,5;DOID:450,7.22e-08,5;DOID:66,7.22e-08,5;DOID:423,7.22e-08,5;DOID:0080000,7.22e-08,5;DOID:11722,7.22e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.09e-32!57;UBERON:0005068!1.09e-32!57;UBERON:0006241!1.09e-32!57;UBERON:0007135!1.09e-32!57;UBERON:0002616!1.97e-32!59;UBERON:0000955!5.73e-32!69;UBERON:0006238!5.73e-32!69;UBERON:0001017!2.25e-30!82;UBERON:0005743!6.18e-29!86;UBERON:0000073!8.30e-28!94;UBERON:0001016!8.30e-28!94;UBERON:0001893!9.99e-28!34;UBERON:0002780!1.42e-27!41;UBERON:0001890!1.42e-27!41;UBERON:0006240!1.42e-27!41;UBERON:0002020!2.13e-27!34;UBERON:0003528!2.13e-27!34;UBERON:0001869!9.64e-27!32;UBERON:0002791!1.11e-26!33;UBERON:0003080!1.47e-26!42;UBERON:0000153!1.23e-22!129;UBERON:0007811!1.23e-22!129;UBERON:0000033!1.63e-22!123;UBERON:0003075!1.31e-20!86;UBERON:0007284!1.31e-20!86;UBERON:0000956!3.78e-20!25;UBERON:0000203!3.78e-20!25;UBERON:0007023!1.16e-19!115;UBERON:0002619!4.85e-19!22;UBERON:0002346!8.16e-19!90;UBERON:0001950!3.46e-17!20;UBERON:0004121!1.04e-16!169;UBERON:0003056!1.62e-16!61;UBERON:0000924!1.01e-15!173;UBERON:0006601!1.01e-15!173;UBERON:0000475!1.83e-12!365;UBERON:0002420!3.32e-09!9;UBERON:0007245!3.32e-09!9;UBERON:0010009!3.32e-09!9;UBERON:0010011!3.32e-09!9;UBERON:0000454!3.32e-09!9;UBERON:0002308!1.12e-08!9;UBERON:0000125!1.12e-08!9;UBERON:0000200!7.79e-08!6;UBERON:0003076!2.12e-07!15;UBERON:0003057!2.12e-07!15;UBERON:0004733!2.76e-07!12;UBERON:0002028!2.76e-07!12;UBERON:0007277!2.76e-07!12;UBERON:0009663!3.36e-07!7;UBERON:0002199!3.49e-07!45;UBERON:0002416!3.49e-07!45;UBERON:0002097!3.76e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.45e-43;32!UBERON:0001893;8.39e-43;34!UBERON:0002791;6.41e-40;32!UBERON:0003528;2.53e-39;34!UBERON:0002020;2.53e-39;34!UBERON:0002619;7.71e-38;22!UBERON:0000956;3.57e-36;25!UBERON:0000203;3.57e-36;25!UBERON:0002780;7.14e-34;41!UBERON:0001890;7.14e-34;41!UBERON:0001950;1.51e-33;20!UBERON:0000073;1.21e-30;53!UBERON:0002616;1.21e-30;53!UBERON:0000955;2.38e-21;68!UBERON:0001017;3.68e-21;75!UBERON:0000200;2.80e-16;6!UBERON:0002420;6.36e-14;9!UBERON:0007245;6.36e-14;9!UBERON:0010009;6.36e-14;9!UBERON:0010011;6.36e-14;9!UBERON:0000454;6.36e-14;9!UBERON:0001016;1.30e-13;83!UBERON:0000349;3.54e-13;5!UBERON:0000369;2.54e-11;4!UBERON:0002435;2.54e-11;4!UBERON:0000204;2.54e-11;4!UBERON:0000125;6.07e-10;9!UBERON:0002308;6.07e-10;9!UBERON:0001871;1.44e-09;6!UBERON:0009663;1.58e-09;7!UBERON:0001870;4.60e-09;3!UBERON:0001872;4.96e-09;5!UBERON:0007023;5.05e-09;114!UBERON:0002021;5.94e-09;5!UBERON:0005383;6.87e-09;3!UBERON:0005382;6.87e-09;3!UBERON:0004733;9.51e-09;12!UBERON:0002028;9.51e-09;12!UBERON:0004732;5.42e-08;13!UBERON:0002097;2.26e-07;41!UBERON:0011216;2.58e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.39e-56,53;UBERON:0002616,2.39e-56,53;UBERON:0001049,8.78e-53,56;UBERON:0005068,8.78e-53,56;UBERON:0006241,8.78e-53,56;UBERON:0007135,8.78e-53,56;UBERON:0002780,5.55e-49,41;UBERON:0001890,5.55e-49,41;UBERON:0003080,5.55e-49,41;UBERON:0006240,5.55e-49,41;UBERON:0000955,7.52e-49,68;UBERON:0006238,7.52e-49,68;UBERON:0001893,1.50e-48,34;UBERON:0001869,2.44e-48,32;UBERON:0003528,1.24e-44,34;UBERON:0002020,1.24e-44,34;UBERON:0002791,2.45e-44,32;UBERON:0001017,1.13e-41,81;UBERON:0002619,7.79e-38,22;UBERON:0001016,2.11e-36,89;UBERON:0000956,3.38e-36,25;UBERON:0000203,3.38e-36,25;UBERON:0001950,1.59e-33,20;UBERON:0003075,9.81e-33,82;UBERON:0007284,9.81e-33,82;UBERON:0002346,1.01e-30,86;UBERON:0003056,3.55e-30,61;UBERON:0010371,1.32e-26,104;UBERON:0007023,1.70e-25,114;UBERON:0010314,1.09e-23,132;UBERON:0004121,7.06e-22,171;UBERON:0000924,7.06e-22,171;UBERON:0006601,7.06e-22,171;UBERON:0000200,2.79e-16,6;UBERON:0002420,6.22e-14,9;UBERON:0007245,6.22e-14,9;UBERON:0010009,6.22e-14,9;UBERON:0010011,6.22e-14,9;UBERON:0000454,6.22e-14,9;UBERON:0000349,3.39e-13,5;UBERON:0011216,3.01e-12,223;UBERON:0000369,2.46e-11,4;UBERON:0002435,2.46e-11,4;UBERON:0000204,2.46e-11,4;UBERON:0010082,2.46e-11,4;UBERON:0002199,3.49e-10,46;UBERON:0002416,3.49e-10,46;UBERON:0000125,6.05e-10,9;UBERON:0002308,6.05e-10,9;UBERON:0001871,1.50e-09,6;UBERON:0009663,1.56e-09,7;UBERON:0002097,4.25e-09,41;UBERON:0001870,4.45e-09,3;UBERON:0001872,5.03e-09,5;UBERON:0002021,6.03e-09,5;UBERON:0004733,6.41e-09,12;UBERON:0002028,6.41e-09,12;UBERON:0007277,6.41e-09,12;UBERON:0005383,6.55e-09,3;UBERON:0005382,6.55e-09,3;UBERON:0000025,2.57e-08,192;UBERON:0004732,3.78e-08,13;UBERON:0003076,6.44e-07,15;UBERON:0003057,6.44e-07,15 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0.246242116153576,0,0,1.43117993565528,0.136874425072884,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.180258620683,0.393010762749165,0.205601498999509,0,0.651844533267181,0.946895611469467,0,0,1.17842362989935,1.77227115666897,0.812411591295047,0,0,0,0,0,0,0,0,0.113309342697566,2.29932296161153,0.68725489096526,0.506039384039006,0.95569624297229,0,0,0.150575119077773,0.255973222308837,1.24930726552346,0.236777252044017,0.821127996921047,0,0,0.289648807765598,0,0,0,0,0,0.289693037921647,0,0,0,0.221729397462564,0,2.03017567021455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0.312160076830321,0.570471821544449,0,0.352303495931295,0.485618833104395,0,0.816616685019573,0,0.516628905878827,4.75201142912821,1.7308685049499,0,0,0.168336113954066,0.250237039743928,0.554128230968366,1.31693286264251,1.22595118319608,1.20190447125277,0.113432183160021,1.25572744982203,3.20336083227851,3.81477422087211,0.600182192168805,2.06105058476878,2.83404594050192,2.60563598864226,1.35021065793013,1.85130309806277,2.52433774244115,2.66944706062668,0.323292113637624,1.77504796258307,1.5112814734146,1.01736355386293,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,1.56449532329816,1.28648187638577,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.414656231081544,0,0.50496973370552,0,0,0,0,0,0,0,0,0,0.07333828582095,0.646358578788889,0,0.845302752556,0,1.04007436911366,0,0,0,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0.205476322550383,1.25342674267927,0,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0,0.207970861530807,0.535286966391485,0.946214490203608,0,0,0,0,0,0,1.65078867489357,0,0,0.413536052245775,0,0,0,0,0,0.744323423456331,1.07423381301644,1.12264037773229,0.256278298511402,1.53512174720011,0.160853921143607,0,1.07946785661859,1.59805552781814,0.410635780069046,2.07701771673448,0.348631135379878,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.48335359146061,0.308097234229289,0.307007349452259,0,0.322260734604821,0.145016693914229,0.170453254832202,0.534192213880424,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0.632758849437452,0.190630193923825,0,0,0,0,0.539617372749944,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0.545999645631943,0.282810863907425,0,0,0,0,0,0,0,0,0,0.573645408816206,0.196498082026242,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0.764637207142375,1.13929437434833,0.238231775457789,0,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,29.8244294329889,7.45547906975718,0.333926115068718,0,0,0,0.276283915531148,0,1.53403023753232,0,0.622079175323615,0,0,0,0,0,0,17.4479894297139,25.6039950926709,0,0,0,0,0,0,0,0,0,0,23.9150174169737,11.81845098529,4.5774520895125,2.98564001814306,2.95547618953547,11.4080406520066,0,0,0.0769502585037971,0,0,0,0,0,0.183195186803725,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77912677208373,0.86494757262552,0.730953646538188,1.34802265961354,0,10.0733711661896,0,0,0,0,0,0.30607276163049,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,9.11525972099568,0,0,0,0,0.529536760149002,0.225980740780532,0,0,28.8064121599248,0,0,0.213452994739353,0,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0.101998217636322,0,7.20504346451747,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,8.74752658790234,2.72406812223151,0,0.137539436597234,0.415440338029185,0,0,21.1408457169926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681552087141687,0,0,0,1.29282956361551,0.92562821219883,0,0,0.213574825135389,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,40.7591362784814,36.8519320003929,13.771002377715,1.72022758707021,0.776503360757966,1.55241007353459,0,0,0,0,0,0,0,0.895528817321244,1.16856654923612,1.10961172300523,0,0,0,0,0,0.15543720058278,0,0.318593534327405,0,0,0,0.53168342911599,0,0.150257608997218,0.380805212168795,0,0.909243296012797,0,0,2.78667122089031,0,0.343395705182793,0.336749488765919,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,13.1345514344144,0,0,0.163565394255844,0,0,0,2.59983614611409,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,0,0,0.352675943690684,1.531227386766,19.0760798536485,49.5938017139547,6.06608664417175,18.0502400531864,0,14.0389222502362,11.6262464854933,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,20.5989633086104,28.1188115500985,13.2279549760758,17.05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| ||
|short_description=p7@CHN1 | |short_description=p7@CHN1 | ||
}} | }} |
Latest revision as of 08:00, 18 September 2015
Short description: | p7@CHN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CHN1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000444573_5end |
EntrezGene: | CHN1 |
HGNC: | 1943 |
UniProt: | C9J1N1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.42e-14 | 23 |
fibroblast | 7.11e-11 | 76 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.22e-08 | 5 |
myotonic disease | 7.22e-08 | 5 |
muscle tissue disease | 7.22e-08 | 5 |
myopathy | 7.22e-08 | 5 |
muscular disease | 7.22e-08 | 5 |
myotonic dystrophy | 7.22e-08 | 5 |