FFCP PHASE1:Hg19::chr12:56583362..56583369,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6601 | |EntrezGene=6601 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11105 | |HGNC=11105 | ||
|TSSclassifier=strong | |||
|UniProt=F8VTJ5,Q59GV3,Q8TAQ2 | |UniProt=F8VTJ5,Q59GV3,Q8TAQ2 | ||
|association_with_transcript=-11bp_to_ENST00000394023,NM_001130420,NM_003075,NM_139067,uc001ska.2,uc001skb.2,uc001skc.2,uc001skd.2,uc010sqf.1_5end | |association_with_transcript=-11bp_to_ENST00000394023,NM_001130420,NM_003075,NM_139067,uc001ska.2,uc001skb.2,uc001skc.2,uc001skd.2,uc010sqf.1_5end | ||
|cluster_id=chr12:56583362..56583369,- | |||
|description=CAGE_peak_7_at_SMARCC2_5end | |description=CAGE_peak_7_at_SMARCC2_5end | ||
|id=chr12:56583362..56583369,- | |id=chr12:56583362..56583369,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000511;2.24e-09;1!CL:0002625;2.24e-09;1!CL:0000222;2.24e-09;1!CL:0000216;2.24e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.32e-09,1;CL:0002625,1.32e-09,1;CL:0000216,1.32e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3347;2.24e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,1.69e-09,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002791;3.09e-34;32!UBERON:0002619;2.68e-33;22!UBERON:0001869;5.24e-33;32!UBERON:0003528;7.16e-32;34!UBERON:0002020;7.16e-32;34!UBERON:0001893;4.22e-31;34!UBERON:0001950;1.78e-29;20!UBERON:0000956;2.78e-29;25!UBERON:0000203;2.78e-29;25!UBERON:0002780;3.28e-23;41!UBERON:0001890;3.28e-23;41!UBERON:0000369;1.23e-18;4!UBERON:0002435;1.23e-18;4!UBERON:0000204;1.23e-18;4!UBERON:0001872;4.96e-15;5!UBERON:0002021;4.96e-15;5!UBERON:0000073;7.34e-13;53!UBERON:0002616;7.34e-13;53!UBERON:0005383;1.15e-11;3!UBERON:0005382;1.15e-11;3!UBERON:0009663;6.81e-11;7!UBERON:0001017;1.22e-10;75!UBERON:0002581;2.24e-09;1!UBERON:0002902;2.24e-09;1!UBERON:0001882;2.24e-09;1!UBERON:0001874;2.24e-09;1!UBERON:0003112;2.24e-09;1!UBERON:0001136;2.24e-09;1!UBERON:0001343;2.24e-09;1!UBERON:0011158;2.24e-09;1!UBERON:0009899;2.24e-09;1!UBERON:0004910;2.24e-09;1!UBERON:0004813;2.24e-09;1!UBERON:0003128;2.24e-09;1!UBERON:0005403;2.24e-09;1!UBERON:0001703;2.24e-09;1!UBERON:0002241;2.24e-09;1!UBERON:0000955;7.29e-09;68!UBERON:0002420;1.39e-08;9!UBERON:0000125;1.39e-08;9!UBERON:0007245;1.39e-08;9!UBERON:0002308;1.39e-08;9!UBERON:0010009;1.39e-08;9!UBERON:0010011;1.39e-08;9!UBERON:0000454;1.39e-08;9!UBERON:0000349;1.63e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002791,8.71e-39,32;UBERON:0001869,8.71e-39,32;UBERON:0003528,1.92e-36,34;UBERON:0002020,1.92e-36,34;UBERON:0001893,1.92e-36,34;UBERON:0002619,3.30e-33,22;UBERON:0002780,5.32e-30,41;UBERON:0001890,5.32e-30,41;UBERON:0003080,5.32e-30,41;UBERON:0006240,5.32e-30,41;UBERON:0001950,2.17e-29,20;UBERON:0000956,3.34e-29,25;UBERON:0000203,3.34e-29,25;UBERON:0003056,7.54e-23,61;UBERON:0000073,7.81e-23,53;UBERON:0002616,7.81e-23,53;UBERON:0001049,1.64e-21,56;UBERON:0005068,1.64e-21,56;UBERON:0006241,1.64e-21,56;UBERON:0007135,1.64e-21,56;UBERON:0000955,5.30e-20,68;UBERON:0006238,5.30e-20,68;UBERON:0001017,5.03e-19,81;UBERON:0000369,6.18e-19,4;UBERON:0002435,6.18e-19,4;UBERON:0000204,6.18e-19,4;UBERON:0010082,6.18e-19,4;UBERON:0002346,4.16e-18,86;UBERON:0001016,6.70e-17,89;UBERON:0003075,1.94e-16,82;UBERON:0007284,1.94e-16,82;UBERON:0002021,3.32e-15,5;UBERON:0001872,4.03e-15,5;UBERON:0007023,4.40e-15,114;UBERON:0010314,1.75e-12,132;UBERON:0010371,1.81e-12,104;UBERON:0005383,6.04e-12,3;UBERON:0005382,6.04e-12,3;UBERON:0009663,4.63e-11,7;UBERON:0004121,2.79e-10,171;UBERON:0000924,2.79e-10,171;UBERON:0006601,2.79e-10,171;UBERON:0001874,1.03e-09,1;UBERON:0002902,1.12e-09,1;UBERON:0009899,1.12e-09,1;UBERON:0001136,1.32e-09,1;UBERON:0001343,1.32e-09,1;UBERON:0004910,1.32e-09,1;UBERON:0005154,1.32e-09,1;UBERON:0005295,1.32e-09,1;UBERON:0004813,1.32e-09,1;UBERON:0005297,1.32e-09,1;UBERON:0005294,1.32e-09,1;UBERON:0010141,1.32e-09,1;UBERON:0005891,1.32e-09,1;UBERON:0002581,1.43e-09,1;UBERON:0001882,2.35e-09,1;UBERON:0005403,2.35e-09,1;UBERON:0003112,3.83e-09,1;UBERON:0011158,3.83e-09,1;UBERON:0003128,3.83e-09,1;UBERON:0001703,3.83e-09,1;UBERON:0002241,3.83e-09,1;UBERON:0004761,3.83e-09,1;UBERON:0009617,3.83e-09,1;UBERON:0002420,1.03e-08,9;UBERON:0000125,1.03e-08,9;UBERON:0007245,1.03e-08,9;UBERON:0002308,1.03e-08,9;UBERON:0010009,1.03e-08,9;UBERON:0010011,1.03e-08,9;UBERON:0000454,1.03e-08,9;UBERON:0000349,1.66e-07,5 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0.261185628199839,0.491467873003018,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0,0.251085279189606,0.229240217243854,0.246301768349837,0.0787107813136792,0.393364276848904,0,0.154816123316076,0,0.6024118375565,0,0.232401601740905,0.142169232487422,0.587200878669695,0,0,0,0.223915474239924,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0,0,0.112328631146495,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0.14828656316206,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0.318565414324097,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0,0,0.289693037921647,0,0,0.189069634328136,0,0.087834785693126,0.392937226493138,0.364295288292542,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.488124115096339,0.367663080345869,0,0.267899184852239,0,0.225222960966644,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0.132409180813219,0.286836620748814,0,0,1.06748995729705,0.24666754841716,0.311211035399766,0,0.163461903113459,0.454072282934794,0,0,0.312160076830321,0,0,0.23486899728753,0,0,0.204154171254893,0,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0.877955241761676,0,0,0,0,0.213557388818567,0,0,0,0,0,0.337552664482532,0,0.252433774244115,0,0.161646056818812,0,0.10075209822764,0,0,0.272746120590835,0.286804595389004,0.243947412259191,0.132529768321485,0.116193942869518,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.220587945464788,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0.579652024875384,0.234817388471643,0.144366447761074,0.462985512576611,0,0,0.858486162094873,0,0,0,0.93733833986777,0,0,0,0,0.383382679165211,0,0.176096868026452,0,0.288239906833923,0,0.317489471460845,0.381988425558278,0,0,0.308482478109971,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0.224170287987055,0.197030760201927,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0.502548796003046,0,0,0,0,0,0.500170521059677,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0.368738337083406,0.0868836144680828,0,0,0,0,0.426910231213777,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0.120859449591622,0.200506470303285,0,0.229628896329213,0,0.262248829918848,0.902399225814824,0.15403067420883,0,0,0,0,0.170093705276516,0,0,0.541892875087706,0,0,0,0,0,0,0,0.656029291399411,0,0,0.27470839445503,0.082509499920588,0,0.650060246036521,1.6068392984416,0.193341436584244,0.154048617114644,0.15350367472613,0,0.107420244868274,0.290033387828457,0,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0.975267478179181,0.243713489631284,0,0,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0.376575203107117,0.43050537267123,0,0,0.229723400206959,0,0.764637207142375,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0.213425530045242,0.159426272728822,0,0,0,0.324621940274555,0,0.228234679033192,0,0,0.169291777801603,0.1605880751037,0.403599414382095,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0,0.242721043499027,0.111443384277478,0.284136146806413,0.23874448473769,0,0.307160702099232,0,0.844016498463076,0.111308705022906,0.494411622680279,1.90012867315194,0.19924798825107,0,0,0.20453736500431,0.123084805461069,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,0,0,1.48428957058962,0,0.260427761085233,0.0874599999961957,0,0,0.254253650292766,0,0.344743373241465,0,0.173624994933292,0,1.32656082487949,0,0.995213339381022,0,1.09692698576986,0.32681539055697,0.139423744278603,0.0769502585037971,0.113942055847001,0.46112780877612,0.179515288819544,0.325942115766024,0,0,0,0,0.627921025580099,0.166211681900156,0,0,0,0.37950746544837,0.476809736941136,0,0,0,0.216388639742091,0,0.176915129006678,0,0,0,0.208843899010911,0.337005664903385,0,0.937057782901357,0.182454789215666,0,0,0,0,0,0.126373159256976,0,0,0,0,0.313932918407225,0,0,0,0.347119476670262,0,0.435296032902013,0.17472666824203,0,0.290268993867255,0.584714536689484,0.246346371159628,0,0,0.677942222341597,0,0,1.13959432720582,0.195551382734803,0,0.213452994739353,0,0.288180834308212,0.114536596165916,0.171594997861965,0,0.124252535565433,0,0.135904206073614,0.209205692624666,0,0,0,0.547621515567972,0,0,0.525774708558629,0,0,0,0.199679000498991,0,0.446342914883745,0.201550417460179,0,0,0.0787831823072236,0.164831716762333,0.202210631562555,0.0984274815147488,0.254019996197353,0,2.04305109167363,0,0.137539436597234,0,0,0,0.911243349870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| ||
|short_description=p7@SMARCC2 | |short_description=p7@SMARCC2 | ||
}} | }} |
Latest revision as of 10:19, 19 September 2015
Short description: | p7@SMARCC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SMARCC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000394023, NM_001130420, NM_003075, NM_139067, uc001ska.2, uc001skb.2, uc001skc.2, uc001skd.2, uc010sqf.1_5end |
EntrezGene: | SMARCC2 |
HGNC: | 11105 |
UniProt: | F8VTJ5Q59GV3Q8TAQ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.32e-09 | 1 |
seminiferous tubule epithelial cell | 1.32e-09 | 1 |
Sertoli cell | 1.32e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 1.69e-09 | 1 |