FFCP PHASE1:Hg19::chr2:234475397..234475438,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55230 | |EntrezGene=55230 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20069 | |HGNC=20069 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NVE5,E7EUL3 | |UniProt=Q9NVE5,E7EUL3 | ||
|association_with_transcript=0bp_to_ENST00000251722,ENST00000435959,ENST00000484528,uc010zmu.1_5end | |association_with_transcript=0bp_to_ENST00000251722,ENST00000435959,ENST00000484528,uc010zmu.1_5end | ||
|cluster_id=chr2:234475397..234475438,- | |||
|description=CAGE_peak_1_at_USP40_5end | |description=CAGE_peak_1_at_USP40_5end | ||
|id=chr2:234475397..234475438,- | |id=chr2:234475397..234475438,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.54e-22!365;UBERON:0000481!1.52e-13!347;UBERON:0000062!1.52e-13!511;UBERON:0000468!2.08e-12!659;UBERON:0007023!9.11e-12!115;UBERON:0000153!4.07e-11!129;UBERON:0007811!4.07e-11!129;UBERON:0000924!5.19e-11!173;UBERON:0006601!5.19e-11!173;UBERON:0000033!6.77e-11!123;UBERON:0004121!9.75e-11!169;UBERON:0000467!1.10e-10!625;UBERON:0000480!2.07e-10!626;UBERON:0001049!2.83e-10!57;UBERON:0005068!2.83e-10!57;UBERON:0006241!2.83e-10!57;UBERON:0007135!2.83e-10!57;UBERON:0000119!3.14e-10!312;UBERON:0000483!4.08e-10!309;UBERON:0000477!6.62e-10!286;UBERON:0004111!1.13e-09!241;UBERON:0002616!1.44e-09!59;UBERON:0000955!1.86e-09!69;UBERON:0006238!1.86e-09!69;UBERON:0004119!1.13e-08!169;UBERON:0000925!1.13e-08!169;UBERON:0006595!1.13e-08!169;UBERON:0002050!1.50e-08!605;UBERON:0005423!1.50e-08!605;UBERON:0001007!2.42e-08!155;UBERON:0001555!2.42e-08!155;UBERON:0007026!2.42e-08!155;UBERON:0000073!2.58e-08!94;UBERON:0001016!2.58e-08!94;UBERON:0000923!3.03e-08!604;UBERON:0005291!3.03e-08!604;UBERON:0006598!3.03e-08!604;UBERON:0002532!3.03e-08!604;UBERON:0005743!4.88e-08!86;UBERON:0002780!5.12e-08!41;UBERON:0001890!5.12e-08!41;UBERON:0006240!5.12e-08!41;UBERON:0002346!7.81e-08!90;UBERON:0003080!1.08e-07!42;UBERON:0003075!1.31e-07!86;UBERON:0007284!1.31e-07!86;UBERON:0001017!1.36e-07!82;UBERON:0000922!1.48e-07!612 | |ontology_enrichment_uberon=UBERON:0000475!1.54e-22!365;UBERON:0000481!1.52e-13!347;UBERON:0000062!1.52e-13!511;UBERON:0000468!2.08e-12!659;UBERON:0007023!9.11e-12!115;UBERON:0000153!4.07e-11!129;UBERON:0007811!4.07e-11!129;UBERON:0000924!5.19e-11!173;UBERON:0006601!5.19e-11!173;UBERON:0000033!6.77e-11!123;UBERON:0004121!9.75e-11!169;UBERON:0000467!1.10e-10!625;UBERON:0000480!2.07e-10!626;UBERON:0001049!2.83e-10!57;UBERON:0005068!2.83e-10!57;UBERON:0006241!2.83e-10!57;UBERON:0007135!2.83e-10!57;UBERON:0000119!3.14e-10!312;UBERON:0000483!4.08e-10!309;UBERON:0000477!6.62e-10!286;UBERON:0004111!1.13e-09!241;UBERON:0002616!1.44e-09!59;UBERON:0000955!1.86e-09!69;UBERON:0006238!1.86e-09!69;UBERON:0004119!1.13e-08!169;UBERON:0000925!1.13e-08!169;UBERON:0006595!1.13e-08!169;UBERON:0002050!1.50e-08!605;UBERON:0005423!1.50e-08!605;UBERON:0001007!2.42e-08!155;UBERON:0001555!2.42e-08!155;UBERON:0007026!2.42e-08!155;UBERON:0000073!2.58e-08!94;UBERON:0001016!2.58e-08!94;UBERON:0000923!3.03e-08!604;UBERON:0005291!3.03e-08!604;UBERON:0006598!3.03e-08!604;UBERON:0002532!3.03e-08!604;UBERON:0005743!4.88e-08!86;UBERON:0002780!5.12e-08!41;UBERON:0001890!5.12e-08!41;UBERON:0006240!5.12e-08!41;UBERON:0002346!7.81e-08!90;UBERON:0003080!1.08e-07!42;UBERON:0003075!1.31e-07!86;UBERON:0007284!1.31e-07!86;UBERON:0001017!1.36e-07!82;UBERON:0000922!1.48e-07!612 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,2.74e-14,223;UBERON:0007023,1.25e-11,114;UBERON:0004121,8.36e-11,171;UBERON:0000924,8.36e-11,171;UBERON:0006601,8.36e-11,171;UBERON:0001049,1.31e-10,56;UBERON:0005068,1.31e-10,56;UBERON:0006241,1.31e-10,56;UBERON:0007135,1.31e-10,56;UBERON:0000119,1.98e-10,309;UBERON:0000483,2.57e-10,306;UBERON:0000955,1.00e-09,68;UBERON:0006238,1.00e-09,68;UBERON:0004111,1.31e-09,240;UBERON:0000073,3.02e-09,53;UBERON:0002616,3.02e-09,53;UBERON:0010371,3.02e-09,104;UBERON:0010314,9.05e-09,132;UBERON:0002346,1.24e-08,86;UBERON:0003075,2.05e-08,82;UBERON:0007284,2.05e-08,82;UBERON:0001016,4.63e-08,89;UBERON:0002780,5.12e-08,41;UBERON:0001890,5.12e-08,41;UBERON:0003080,5.12e-08,41;UBERON:0006240,5.12e-08,41;UBERON:0001017,8.58e-08,81;UBERON:0004119,1.53e-07,160;UBERON:0000925,1.53e-07,160;UBERON:0006595,1.53e-07,160;UBERON:0001007,3.47e-07,145;UBERON:0001555,3.47e-07,145;UBERON:0007026,3.47e-07,145;UBERON:0002050,7.34e-07,564;UBERON:0003102,9.30e-07,99 | |||
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| ||
|short_description=p1@USP40 | |short_description=p1@USP40 | ||
}} | }} |
Latest revision as of 23:17, 15 September 2015
Short description: | p1@USP40 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_USP40_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000251722, ENST00000435959, ENST00000484528, uc010zmu.1_5end |
EntrezGene: | USP40 |
HGNC: | 20069 |
UniProt: | Q9NVE5E7EUL3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data