FFCP PHASE1:Hg19::chr19:54876483..54876501,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3903 | |EntrezGene=3903 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6477 | |HGNC=6477 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000391741_5end | |association_with_transcript=-6bp_to_ENST00000391741_5end | ||
|cluster_id=chr19:54876483..54876501,- | |||
|coexpression_cluster_id=C1105 | |coexpression_cluster_id=C1105 | ||
|description=CAGE_peak_2_at_LAIR1_5end | |description=CAGE_peak_2_at_LAIR1_5end | ||
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|ontology_enrichment_celltype=CL:0000037!1.90e-68!172;CL:0000566!1.90e-68!172;CL:0002032!1.89e-63!165;CL:0000837!1.89e-63!165;CL:0000988!1.93e-63!182;CL:0000738!2.64e-59!140;CL:0002031!1.28e-52!124;CL:0002087!1.20e-51!119;CL:0000763!3.31e-45!112;CL:0000049!3.31e-45!112;CL:0000766!7.22e-42!76;CL:0000839!3.84e-38!70;CL:0000557!2.68e-37!71;CL:0002194!3.42e-34!63;CL:0000576!3.42e-34!63;CL:0000040!3.42e-34!63;CL:0000559!3.42e-34!63;CL:0002009!4.25e-33!65;CL:0002057!3.18e-32!42;CL:0000860!1.42e-28!45;CL:0000542!2.52e-15!53;CL:0000051!2.52e-15!53;CL:0000838!5.19e-15!52;CL:0000134!1.97e-10!358;CL:0000084!1.38e-09!25;CL:0000827!1.38e-09!25;CL:0002320!2.17e-09!365;CL:0000791!3.00e-09!18;CL:0000789!3.00e-09!18;CL:0002420!3.00e-09!18;CL:0002419!3.00e-09!18;CL:0000790!3.00e-09!18;CL:0000236!3.44e-08!14;CL:0002393!1.49e-07!9;CL:0002397!1.49e-07!9;CL:0000625!5.86e-07!11 | |ontology_enrichment_celltype=CL:0000037!1.90e-68!172;CL:0000566!1.90e-68!172;CL:0002032!1.89e-63!165;CL:0000837!1.89e-63!165;CL:0000988!1.93e-63!182;CL:0000738!2.64e-59!140;CL:0002031!1.28e-52!124;CL:0002087!1.20e-51!119;CL:0000763!3.31e-45!112;CL:0000049!3.31e-45!112;CL:0000766!7.22e-42!76;CL:0000839!3.84e-38!70;CL:0000557!2.68e-37!71;CL:0002194!3.42e-34!63;CL:0000576!3.42e-34!63;CL:0000040!3.42e-34!63;CL:0000559!3.42e-34!63;CL:0002009!4.25e-33!65;CL:0002057!3.18e-32!42;CL:0000860!1.42e-28!45;CL:0000542!2.52e-15!53;CL:0000051!2.52e-15!53;CL:0000838!5.19e-15!52;CL:0000134!1.97e-10!358;CL:0000084!1.38e-09!25;CL:0000827!1.38e-09!25;CL:0002320!2.17e-09!365;CL:0000791!3.00e-09!18;CL:0000789!3.00e-09!18;CL:0002420!3.00e-09!18;CL:0002419!3.00e-09!18;CL:0000790!3.00e-09!18;CL:0000236!3.44e-08!14;CL:0002393!1.49e-07!9;CL:0002397!1.49e-07!9;CL:0000625!5.86e-07!11 | ||
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|ontology_enrichment_development_v019=CL:0002057;3.00e-25;42!CL:0000049;1.23e-14;108!CL:0000790;5.77e-10;18!CL:0000051;2.40e-09;53 | |ontology_enrichment_development_v019=CL:0002057;3.00e-25;42!CL:0000049;1.23e-14;108!CL:0000790;5.77e-10;18!CL:0000051;2.40e-09;53 | ||
|ontology_enrichment_disease=DOID:1240!1.53e-09!39;DOID:8692!8.96e-08!31;DOID:2531!2.83e-07!51;DOID:0060083!2.83e-07!51 | |ontology_enrichment_disease=DOID:1240!1.53e-09!39;DOID:8692!8.96e-08!31;DOID:2531!2.83e-07!51;DOID:0060083!2.83e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.04e-07;31!DOID:1240;1.36e-07;39 | |ontology_enrichment_disease_v019=DOID:8692;1.04e-07;31!DOID:1240;1.36e-07;39 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,1.66e-09,39;DOID:8692,4.51e-08,31;DOID:2531,4.24e-07,51;DOID:0060083,4.24e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.70e-42!102;UBERON:0003061!6.70e-42!102;UBERON:0002193!5.84e-37!112;UBERON:0002371!2.34e-32!80;UBERON:0007023!2.74e-30!115;UBERON:0001474!1.09e-28!86;UBERON:0002405!4.96e-25!115;UBERON:0004765!2.77e-21!101;UBERON:0001434!2.77e-21!101;UBERON:0001049!6.65e-10!57;UBERON:0005068!6.65e-10!57;UBERON:0006241!6.65e-10!57;UBERON:0007135!6.65e-10!57;UBERON:0002384!1.47e-08!375;UBERON:0003081!3.15e-08!216;UBERON:0003080!3.66e-08!42;UBERON:0002780!4.82e-08!41;UBERON:0001890!4.82e-08!41;UBERON:0006240!4.82e-08!41;UBERON:0000178!9.75e-08!15;UBERON:0000179!9.75e-08!15;UBERON:0000463!9.75e-08!15;UBERON:0002616!2.99e-07!59 | |ontology_enrichment_uberon=UBERON:0002390!6.70e-42!102;UBERON:0003061!6.70e-42!102;UBERON:0002193!5.84e-37!112;UBERON:0002371!2.34e-32!80;UBERON:0007023!2.74e-30!115;UBERON:0001474!1.09e-28!86;UBERON:0002405!4.96e-25!115;UBERON:0004765!2.77e-21!101;UBERON:0001434!2.77e-21!101;UBERON:0001049!6.65e-10!57;UBERON:0005068!6.65e-10!57;UBERON:0006241!6.65e-10!57;UBERON:0007135!6.65e-10!57;UBERON:0002384!1.47e-08!375;UBERON:0003081!3.15e-08!216;UBERON:0003080!3.66e-08!42;UBERON:0002780!4.82e-08!41;UBERON:0001890!4.82e-08!41;UBERON:0006240!4.82e-08!41;UBERON:0000178!9.75e-08!15;UBERON:0000179!9.75e-08!15;UBERON:0000463!9.75e-08!15;UBERON:0002616!2.99e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.76e-08;114 | |ontology_enrichment_uberon_v019=UBERON:0007023;2.76e-08;114 | ||
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| ||
|short_description=p2@LAIR1 | |short_description=p2@LAIR1 | ||
}} | }} |
Latest revision as of 22:09, 19 September 2015
Short description: | p2@LAIR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LAIR1_5end |
Coexpression cluster: | C1105_CD14_CD19_acute_CD14CD16_CD4_Mast_granulocyte |
Association with transcript: | -6bp_to_ENST00000391741_5end |
EntrezGene: | LAIR1 |
HGNC: | 6477 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.02e-46 | 98 |
blood island | 1.02e-46 | 98 |
hemolymphoid system | 1.46e-41 | 108 |
bone marrow | 8.47e-39 | 76 |
immune system | 4.22e-36 | 93 |
bone element | 8.19e-34 | 82 |
adult organism | 8.41e-29 | 114 |
skeletal element | 2.81e-28 | 90 |
skeletal system | 1.80e-23 | 100 |
lateral plate mesoderm | 1.19e-11 | 203 |
neural tube | 2.45e-10 | 56 |
neural rod | 2.45e-10 | 56 |
future spinal cord | 2.45e-10 | 56 |
neural keel | 2.45e-10 | 56 |
regional part of nervous system | 2.13e-09 | 53 |
regional part of brain | 2.13e-09 | 53 |
connective tissue | 1.18e-08 | 371 |
regional part of forebrain | 2.60e-08 | 41 |
forebrain | 2.60e-08 | 41 |
anterior neural tube | 2.60e-08 | 41 |
future forebrain | 2.60e-08 | 41 |
brain grey matter | 7.04e-07 | 34 |
gray matter | 7.04e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.66e-09 | 39 |
myeloid leukemia | 4.51e-08 | 31 |
hematologic cancer | 4.24e-07 | 51 |
immune system cancer | 4.24e-07 | 51 |