FFCP PHASE1:Hg19::chr16:28303804..28303864,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388228 | |EntrezGene=388228 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17699 | |HGNC=17699 | ||
|TSSclassifier=strong | |||
|UniProt=Q52WX2 | |UniProt=Q52WX2 | ||
|association_with_transcript=0bp_to_ENST00000341901,NM_001024401,uc002dpd.2_5end | |association_with_transcript=0bp_to_ENST00000341901,NM_001024401,uc002dpd.2_5end | ||
|cluster_id=chr16:28303804..28303864,+ | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_1_at_SBK1_5end | |description=CAGE_peak_1_at_SBK1_5end | ||
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|ontology_enrichment_celltype=CL:0000084!9.68e-11!25;CL:0000827!9.68e-11!25;CL:0000791!5.08e-10!18;CL:0000789!5.08e-10!18;CL:0002420!5.08e-10!18;CL:0002419!5.08e-10!18;CL:0000790!5.08e-10!18;CL:0000542!3.76e-08!53;CL:0000051!3.76e-08!53;CL:0000838!5.39e-08!52;CL:0002319!1.23e-07!25;CL:0000625!8.11e-07!11;CL:0000047!8.98e-07!8 | |ontology_enrichment_celltype=CL:0000084!9.68e-11!25;CL:0000827!9.68e-11!25;CL:0000791!5.08e-10!18;CL:0000789!5.08e-10!18;CL:0002420!5.08e-10!18;CL:0002419!5.08e-10!18;CL:0000790!5.08e-10!18;CL:0000542!3.76e-08!53;CL:0000051!3.76e-08!53;CL:0000838!5.39e-08!52;CL:0002319!1.23e-07!25;CL:0000625!8.11e-07!11;CL:0000047!8.98e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000791;7.74e-12;18!CL:0000789;7.74e-12;18!CL:0002419;7.74e-12;18!CL:0000084;1.30e-11;25!CL:0002319;1.49e-08;25!CL:0000625;6.21e-08;11 | |ontology_enrichment_celltype_v019=CL:0000791;7.74e-12;18!CL:0000789;7.74e-12;18!CL:0002419;7.74e-12;18!CL:0000084;1.30e-11;25!CL:0002319;1.49e-08;25!CL:0000625;6.21e-08;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.45e-12,18;CL:0000789,7.45e-12,18;CL:0002420,7.45e-12,18;CL:0002419,7.45e-12,18;CL:0000790,7.45e-12,18;CL:0000084,1.16e-11,25;CL:0000827,1.16e-11,25;CL:0002319,1.36e-08,25;CL:0000625,5.80e-08,11;CL:0000047,6.57e-08,8 | |||
|ontology_enrichment_development_v019=CL:0000790;7.74e-12;18!UBERON:0006601;2.16e-08;82 | |ontology_enrichment_development_v019=CL:0000790;7.74e-12;18!UBERON:0006601;2.16e-08;82 | ||
|ontology_enrichment_disease=DOID:0050687!5.30e-09!143;DOID:305!2.99e-07!106;DOID:3095!6.19e-07!22;DOID:2994!6.19e-07!22;DOID:171!9.29e-07!10 | |ontology_enrichment_disease=DOID:0050687!5.30e-09!143;DOID:305!2.99e-07!106;DOID:3095!6.19e-07!22;DOID:2994!6.19e-07!22;DOID:171!9.29e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:171;6.72e-08;10!DOID:3095;1.18e-07;22!DOID:2994;1.18e-07;22 | |ontology_enrichment_disease_v019=DOID:171;6.72e-08;10!DOID:3095;1.18e-07;22!DOID:2994;1.18e-07;22 | ||
|ontology_enrichment_disease_v019_2=DOID:171,6.84e-08,10;DOID:3095,1.52e-07,22;DOID:2994,1.52e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0005743!2.82e-28!86;UBERON:0000073!4.93e-28!94;UBERON:0001016!4.93e-28!94;UBERON:0001017!1.53e-27!82;UBERON:0001049!4.25e-23!57;UBERON:0005068!4.25e-23!57;UBERON:0006241!4.25e-23!57;UBERON:0007135!4.25e-23!57;UBERON:0000955!2.30e-21!69;UBERON:0006238!2.30e-21!69;UBERON:0002346!9.96e-21!90;UBERON:0003075!4.37e-19!86;UBERON:0007284!4.37e-19!86;UBERON:0002616!1.80e-18!59;UBERON:0002780!5.61e-18!41;UBERON:0001890!5.61e-18!41;UBERON:0006240!5.61e-18!41;UBERON:0003080!5.94e-18!42;UBERON:0002020!1.32e-16!34;UBERON:0003528!1.32e-16!34;UBERON:0001893!1.79e-16!34;UBERON:0001869!2.19e-16!32;UBERON:0000924!3.58e-16!173;UBERON:0006601!3.58e-16!173;UBERON:0002791!5.95e-16!33;UBERON:0003056!6.00e-16!61;UBERON:0007023!6.41e-15!115;UBERON:0004121!7.51e-15!169;UBERON:0000153!5.59e-14!129;UBERON:0007811!5.59e-14!129;UBERON:0000956!6.04e-14!25;UBERON:0000203!6.04e-14!25;UBERON:0002619!3.76e-13!22;UBERON:0000033!2.94e-12!123;UBERON:0001950!4.24e-12!20 | |ontology_enrichment_uberon=UBERON:0005743!2.82e-28!86;UBERON:0000073!4.93e-28!94;UBERON:0001016!4.93e-28!94;UBERON:0001017!1.53e-27!82;UBERON:0001049!4.25e-23!57;UBERON:0005068!4.25e-23!57;UBERON:0006241!4.25e-23!57;UBERON:0007135!4.25e-23!57;UBERON:0000955!2.30e-21!69;UBERON:0006238!2.30e-21!69;UBERON:0002346!9.96e-21!90;UBERON:0003075!4.37e-19!86;UBERON:0007284!4.37e-19!86;UBERON:0002616!1.80e-18!59;UBERON:0002780!5.61e-18!41;UBERON:0001890!5.61e-18!41;UBERON:0006240!5.61e-18!41;UBERON:0003080!5.94e-18!42;UBERON:0002020!1.32e-16!34;UBERON:0003528!1.32e-16!34;UBERON:0001893!1.79e-16!34;UBERON:0001869!2.19e-16!32;UBERON:0000924!3.58e-16!173;UBERON:0006601!3.58e-16!173;UBERON:0002791!5.95e-16!33;UBERON:0003056!6.00e-16!61;UBERON:0007023!6.41e-15!115;UBERON:0004121!7.51e-15!169;UBERON:0000153!5.59e-14!129;UBERON:0007811!5.59e-14!129;UBERON:0000956!6.04e-14!25;UBERON:0000203!6.04e-14!25;UBERON:0002619!3.76e-13!22;UBERON:0000033!2.94e-12!123;UBERON:0001950!4.24e-12!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.50e-18;32!UBERON:0003528;3.85e-17;34!UBERON:0002020;3.85e-17;34!UBERON:0002791;3.99e-17;32!UBERON:0001893;5.15e-17;34!UBERON:0000956;1.29e-16;25!UBERON:0000203;1.29e-16;25!UBERON:0002780;1.28e-15;41!UBERON:0001890;1.28e-15;41!UBERON:0002619;1.32e-15;22!UBERON:0000073;2.68e-15;53!UBERON:0002616;2.68e-15;53!UBERON:0001950;2.51e-14;20!UBERON:0000955;1.61e-11;68!UBERON:0001016;1.93e-11;83!UBERON:0001017;5.25e-11;75!UBERON:0000922;1.05e-09;49 | |ontology_enrichment_uberon_v019=UBERON:0001869;9.50e-18;32!UBERON:0003528;3.85e-17;34!UBERON:0002020;3.85e-17;34!UBERON:0002791;3.99e-17;32!UBERON:0001893;5.15e-17;34!UBERON:0000956;1.29e-16;25!UBERON:0000203;1.29e-16;25!UBERON:0002780;1.28e-15;41!UBERON:0001890;1.28e-15;41!UBERON:0002619;1.32e-15;22!UBERON:0000073;2.68e-15;53!UBERON:0002616;2.68e-15;53!UBERON:0001950;2.51e-14;20!UBERON:0000955;1.61e-11;68!UBERON:0001016;1.93e-11;83!UBERON:0001017;5.25e-11;75!UBERON:0000922;1.05e-09;49 | ||
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| ||
|short_description=p1@SBK1 | |short_description=p1@SBK1 | ||
}} | }} |
Latest revision as of 23:43, 15 September 2015
Short description: | p1@SBK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SBK1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000341901, NM_001024401, uc002dpd.2_5end |
EntrezGene: | SBK1 |
HGNC: | 17699 |
UniProt: | Q52WX2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.45e-12 | 18 |
alpha-beta T cell | 7.45e-12 | 18 |
immature T cell | 7.45e-12 | 18 |
mature T cell | 7.45e-12 | 18 |
immature alpha-beta T cell | 7.45e-12 | 18 |
T cell | 1.16e-11 | 25 |
pro-T cell | 1.16e-11 | 25 |
neural cell | 1.36e-08 | 25 |
CD8-positive, alpha-beta T cell | 5.80e-08 | 11 |
neuronal stem cell | 6.57e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 6.84e-08 | 10 |
germ cell and embryonal cancer | 1.52e-07 | 22 |
germ cell cancer | 1.52e-07 | 22 |