FFCP PHASE1:Hg19::chr1:31712757..31712839,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:31712757..31712839,-
|short_description=p2@NKAIN1
|description=CAGE_peak_2_at_NKAIN1_5end
|association_with_transcript=-23bp_to_NM_024522_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79570 | |EntrezGene=79570 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25743 | |HGNC=25743 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z5F5,Q4KMZ8 | |UniProt=B7Z5F5,Q4KMZ8 | ||
|association_with_transcript=-23bp_to_NM_024522_5end | |||
|cluster_id=chr1:31712757..31712839,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_NKAIN1_5end | |||
|id=chr1:31712757..31712839,- | |||
|ontology_enrichment_celltype=CL:0000133!4.20e-12!59;CL:0002319!1.92e-10!25;CL:0000047!1.68e-08!8;CL:0000333!2.41e-08!41;CL:0000221!6.94e-08!71;CL:0000540!5.23e-07!6;CL:0000031!5.23e-07!6;CL:0000404!5.23e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002321;9.88e-14;15!CL:0000540;1.31e-12;6!CL:0000404;1.31e-12;6!CL:0002322;1.64e-10;5!CL:0000333;7.60e-10;5!CL:0002319;2.99e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.28e-15,8;CL:0000540,1.33e-12,6;CL:0000031,1.33e-12,6;CL:0000404,1.33e-12,6;CL:0000133,3.03e-12,59;CL:0002322,1.65e-10,5;CL:0002319,3.11e-09,25;CL:0000221,6.76e-09,72;CL:0000333,7.28e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000031;1.31e-12;6!UBERON:0006601;1.11e-08;82!UBERON:0006215;6.61e-07;3!CL:0000133;9.16e-07;59 | |||
|ontology_enrichment_disease=DOID:0050687!3.05e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:169;4.18e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,5.50e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.59e-37!94;UBERON:0001016!6.59e-37!94;UBERON:0005743!2.27e-33!86;UBERON:0001017!6.80e-33!82;UBERON:0000955!4.38e-24!69;UBERON:0006238!4.38e-24!69;UBERON:0001049!4.97e-24!57;UBERON:0005068!4.97e-24!57;UBERON:0006241!4.97e-24!57;UBERON:0007135!4.97e-24!57;UBERON:0003075!2.82e-21!86;UBERON:0007284!2.82e-21!86;UBERON:0002346!3.36e-20!90;UBERON:0002616!5.02e-20!59;UBERON:0001893!8.77e-19!34;UBERON:0002020!1.12e-18!34;UBERON:0003528!1.12e-18!34;UBERON:0002791!4.50e-18!33;UBERON:0001869!1.33e-17!32;UBERON:0004121!1.48e-17!169;UBERON:0000924!4.59e-17!173;UBERON:0006601!4.59e-17!173;UBERON:0001950!4.62e-16!20;UBERON:0002780!5.58e-16!41;UBERON:0001890!5.58e-16!41;UBERON:0006240!5.58e-16!41;UBERON:0002619!1.17e-15!22;UBERON:0003080!2.74e-15!42;UBERON:0000956!4.40e-15!25;UBERON:0000203!4.40e-15!25;UBERON:0003056!7.89e-15!61;UBERON:0000033!1.69e-14!123;UBERON:0000153!3.08e-13!129;UBERON:0007811!3.08e-13!129;UBERON:0003076!2.24e-10!15;UBERON:0003057!2.24e-10!15;UBERON:0000475!5.80e-10!365;UBERON:0004732!9.99e-10!13;UBERON:0007023!4.25e-09!115;UBERON:0004733!5.26e-09!12;UBERON:0002028!5.26e-09!12;UBERON:0007277!5.26e-09!12;UBERON:0000064!5.81e-09!219;UBERON:0002680!3.66e-07!9;UBERON:0001895!3.66e-07!9;UBERON:0010092!3.66e-07!9;UBERON:0001871!6.68e-07!7;UBERON:0000922!7.51e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.62e-25;20!UBERON:0002619;1.65e-25;22!UBERON:0000956;7.13e-22;25!UBERON:0000203;7.13e-22;25!UBERON:0001869;1.55e-19;32!UBERON:0001893;2.64e-19;34!UBERON:0003528;2.52e-18;34!UBERON:0002020;2.52e-18;34!UBERON:0002791;1.76e-17;32!UBERON:0000073;3.28e-17;53!UBERON:0002616;3.28e-17;53!UBERON:0001016;2.78e-16;83!UBERON:0002780;5.48e-16;41!UBERON:0001890;5.48e-16;41!UBERON:0001017;5.27e-14;75!UBERON:0004732;5.42e-12;13!UBERON:0000955;9.13e-12;68!UBERON:0004733;1.16e-10;12!UBERON:0002028;1.16e-10;12!UBERON:0000013;7.60e-10;5!UBERON:0002410;7.60e-10;5!UBERON:0002298;1.08e-09;6!UBERON:0002021;6.42e-09;5!UBERON:0001872;9.80e-09;5!UBERON:0001871;1.43e-08;6!UBERON:0000010;3.47e-07;8!UBERON:0002680;4.16e-07;9!UBERON:0001895;4.16e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.62e-49,89;UBERON:0001017,9.85e-43,81;UBERON:0000955,7.12e-31,68;UBERON:0006238,7.12e-31,68;UBERON:0000073,3.64e-30,53;UBERON:0002616,3.64e-30,53;UBERON:0001049,4.51e-30,56;UBERON:0005068,4.51e-30,56;UBERON:0006241,4.51e-30,56;UBERON:0007135,4.51e-30,56;UBERON:0002619,6.39e-26,22;UBERON:0001950,7.10e-26,20;UBERON:0001893,1.28e-22,34;UBERON:0003528,1.89e-22,34;UBERON:0002020,1.89e-22,34;UBERON:0001869,3.04e-22,32;UBERON:0000956,3.13e-22,25;UBERON:0000203,3.13e-22,25;UBERON:0004121,6.94e-22,171;UBERON:0000924,6.94e-22,171;UBERON:0006601,6.94e-22,171;UBERON:0003075,2.88e-21,82;UBERON:0007284,2.88e-21,82;UBERON:0002780,4.37e-21,41;UBERON:0001890,4.37e-21,41;UBERON:0003080,4.37e-21,41;UBERON:0006240,4.37e-21,41;UBERON:0002791,4.10e-20,32;UBERON:0002346,9.18e-20,86;UBERON:0011216,1.39e-17,223;UBERON:0010371,9.27e-17,104;UBERON:0003056,1.12e-15,61;UBERON:0004732,6.29e-12,13;UBERON:0007023,4.88e-11,114;UBERON:0010314,8.74e-11,132;UBERON:0004733,1.44e-10,12;UBERON:0002028,1.44e-10,12;UBERON:0007277,1.44e-10,12;UBERON:0003076,3.84e-10,15;UBERON:0003057,3.84e-10,15;UBERON:0000013,1.06e-09,5;UBERON:0002410,1.06e-09,5;UBERON:0002298,1.43e-09,6;UBERON:0002021,5.38e-09,5;UBERON:0001872,6.86e-09,5;UBERON:0001871,1.06e-08,6;UBERON:0000010,3.99e-07,8;UBERON:0002680,4.47e-07,9;UBERON:0001895,4.47e-07,9;UBERON:0010092,4.47e-07,9 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0.631719873426831,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0.61560529038394,0.204000691244253,0.940364164434263,0,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.756278537312543,0.443458794925128,0.263504357079378,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0,0,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,19.881714099124,24.9155964444392,14.5242428586898,9.84780022646019,14.1299676490352,12.4092302085782,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.330881918197182,0.217879444092406,0.237270619111097,0.269662616320329,0.392442930250692,1.15424147083917,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,1.39116485970092,0.117408694235822,0,0,0,4.74122638775565,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.825472625798197,1.14596527667483,1.17217447210047,1.71072446022705,0.308482478109971,0,0.571652865261156,0.336393253036082,0.87192013766656,0.36669142910475,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0.542621605391443,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,49.4531444658963,29.3849748855524,52.6001073149855,44.6557126157214,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0.248107807818777,0.153461973288062,0,0.256278298511402,0.511707249066704,0,0,0.154209693802656,0.710246901252508,0.657017248110473,0,1.51073491997947,0.241718899183244,0,0,0.229628896329213,0,0.131124414959424,0,0.616122696835318,0.784349769176855,0,0.105551628892876,0,0,0,0,0.541892875087706,0.501689773854853,0,0,0.223874754722178,0,0,0.512900250232778,0.328014645699706,0,0.103041011647722,0.183138929636687,0.742585499285292,0,0,1.6068392984416,0.096670718292122,0.616194468458578,0.307007349452259,0.413509717453592,0.107420244868274,0.435050081742686,0.767039646744908,0.178064071293475,0,0.192190067365106,0,0,0,0,0,3.69640296211307,0,0,0,0,0,0.316379424718726,0,0.767693373934002,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0.48763373908959,0,0,0,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0.75894634753143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63201841833409,33.6867949342176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671028323677248,0,0,0,1.23087398947712,0,0,0,0,0.146508179271894,3.51945513073589,0,1.98895302764489,0,0.296964680832639,0,1.9882952955326,3.09472716103128,0,0,2.95575571379191,0,0,0.251932747854276,1.84083628503879,0,0,0,0,0,0,0,0,3.87733098438087,1.85536196323703,65.8725533403941,7.0315495493013,0,0,0.1137934482855,0,0,15.8581951691074,2.04123229368278,8.50762475173132,0.885741385813839,0.964771509003264,16.7839909948792,11.2790845129849,14.1862857097703,1.53569778007781,0,0,0.0769502585037971,0.227884111694002,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15683625538167,0,0,0,0.391329237864179,2.42780379534093,0,1.20990716048664,50.5020056690309,0.252746318513952,0.60129367765797,0.72581733978073,0.664653872707185,2.31694369112849,0.313932918407225,3.58417289318877,0,0,0,0,0,1.04836000945218,0,0,0.0730893170861856,0.328461828212837,0.0969890164884194,0.617792886840502,0.451961481561065,0,0,2.84898581801454,0.586654148204409,0.160317640503067,0.213452994739353,0.39961921916426,0,4.81053703896846,1.20116498503375,0,0,0,0.543616824294456,0.418411385249333,0.917983958726896,0,0,2.60120219894787,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,1.16495949527454,0.0787831823072236,0.247247575143499,0.26961417541674,0.688992370603241,0,0,2.99647493445466,18.9688715188723,19.39306056021,9.97056811270044,0,0,2.91597871958518,0,0,0.524545881349981,0,0.35857467866569,0.191915197319445,0,0,0.25426853765475,0,0,0,0,1.23138781124008,0.170388021785422,0.113312091520126,0,0,2.19781025814636,1.45455861916959,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.471162288750703,0.886068179966986,0.610131324509816,2.003054891304,1.14681839138014,2.21858103073705,1.73869928235874,1.10678907948985,0,0,0,0,6.08835377548946,17.9702075477423,0.149254802886874,0.467426619694449,0,0,0,0,0,0,0,0.295710299979268,0,0,0.931577741257556,0,0,0,0,0,0,3.45512452484863,0,0,0,0,0,0.336749488765919,1.26184898228651,0,0,0,0,0,0,0,0,0,1.23682402162117,0,0,0,0.345430341731199,0.607719912354764,1.93561810612423,0,0,0,0,0,0,0,0.533458648470704,0,0,1.65695355226657,0,1.24415452006595,25.0672967755157,6.46948868380091,17.29925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| ||
|short_description=p2@NKAIN1 | |||
}} | }} |
Latest revision as of 12:56, 17 September 2015
Short description: | p2@NKAIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NKAIN1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -23bp_to_NM_024522_5end |
EntrezGene: | NKAIN1 |
HGNC: | 25743 |
UniProt: | B7Z5F5Q4KMZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.28e-15 | 8 |
neuron | 1.33e-12 | 6 |
neuroblast | 1.33e-12 | 6 |
electrically signaling cell | 1.33e-12 | 6 |
neurectodermal cell | 3.03e-12 | 59 |
embryonic stem cell | 1.65e-10 | 5 |
neural cell | 3.11e-09 | 25 |
ectodermal cell | 6.76e-09 | 72 |
migratory neural crest cell | 7.28e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 5.50e-08 | 6 |