FFCP PHASE1:Hg19::chr12:129338008..129338108,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=144423 | |EntrezGene=144423 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26483 | |HGNC=26483 | ||
|TSSclassifier=strong | |||
|UniProt=Q96MS3 | |UniProt=Q96MS3 | ||
|association_with_transcript=0bp_to_ENST00000281703,ENST00000442111,NM_144669,uc001uhx.1,uc001uhy.1_5end | |association_with_transcript=0bp_to_ENST00000281703,ENST00000442111,NM_144669,uc001uhx.1,uc001uhy.1_5end | ||
|cluster_id=chr12:129338008..129338108,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_1_at_GLT1D1_5end | |description=CAGE_peak_1_at_GLT1D1_5end | ||
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|ontology_enrichment_celltype=CL:0000766!2.23e-36!76;CL:0002057!2.66e-36!42;CL:0002194!1.34e-32!63;CL:0000576!1.34e-32!63;CL:0000040!1.34e-32!63;CL:0000559!1.34e-32!63;CL:0000860!1.55e-32!45;CL:0002009!6.97e-31!65;CL:0000738!1.14e-29!140;CL:0000839!6.67e-28!70;CL:0000557!3.45e-27!71;CL:0002087!3.20e-25!119;CL:0002031!1.19e-20!124;CL:0000763!2.58e-19!112;CL:0000049!2.58e-19!112;CL:0000037!2.79e-19!172;CL:0000566!2.79e-19!172;CL:0002032!3.58e-17!165;CL:0000837!3.58e-17!165;CL:0000988!1.62e-16!182;CL:0000094!9.04e-09!8;CL:0002393!4.48e-08!9;CL:0002397!4.48e-08!9 | |ontology_enrichment_celltype=CL:0000766!2.23e-36!76;CL:0002057!2.66e-36!42;CL:0002194!1.34e-32!63;CL:0000576!1.34e-32!63;CL:0000040!1.34e-32!63;CL:0000559!1.34e-32!63;CL:0000860!1.55e-32!45;CL:0002009!6.97e-31!65;CL:0000738!1.14e-29!140;CL:0000839!6.67e-28!70;CL:0000557!3.45e-27!71;CL:0002087!3.20e-25!119;CL:0002031!1.19e-20!124;CL:0000763!2.58e-19!112;CL:0000049!2.58e-19!112;CL:0000037!2.79e-19!172;CL:0000566!2.79e-19!172;CL:0002032!3.58e-17!165;CL:0000837!3.58e-17!165;CL:0000988!1.62e-16!182;CL:0000094!9.04e-09!8;CL:0002393!4.48e-08!9;CL:0002397!4.48e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.47e-33;33!CL:0002057;4.47e-33;33!CL:0000473;6.20e-29;39!CL:0000234;6.20e-29;39!CL:0000576;2.84e-27;48!CL:0000766;1.36e-20;69!CL:0000094;1.68e-10;8!CL:0002087;9.06e-10;104!CL:0000763;7.37e-09;100!CL:0002393;1.04e-07;6!CL:0002397;1.04e-07;6!CL:0000738;1.39e-07;136!CL:0000081;5.52e-07;11 | |ontology_enrichment_celltype_v019=CL:0000860;4.47e-33;33!CL:0002057;4.47e-33;33!CL:0000473;6.20e-29;39!CL:0000234;6.20e-29;39!CL:0000576;2.84e-27;48!CL:0000766;1.36e-20;69!CL:0000094;1.68e-10;8!CL:0002087;9.06e-10;104!CL:0000763;7.37e-09;100!CL:0002393;1.04e-07;6!CL:0002397;1.04e-07;6!CL:0000738;1.39e-07;136!CL:0000081;5.52e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.88e-46,48;CL:0000234,7.88e-46,48;CL:0000860,1.12e-44,42;CL:0002057,1.12e-44,42;CL:0000766,1.83e-44,72;CL:0002194,2.18e-40,59;CL:0000576,2.18e-40,59;CL:0000040,2.18e-40,59;CL:0000559,2.18e-40,59;CL:0002009,1.98e-38,61;CL:0000839,4.57e-34,66;CL:0000557,2.83e-33,67;CL:0000738,2.30e-32,136;CL:0002087,1.27e-27,115;CL:0000763,2.72e-24,108;CL:0000049,2.72e-24,108;CL:0002031,3.13e-22,120;CL:0000037,5.91e-22,168;CL:0000988,1.56e-19,177;CL:0002032,2.86e-19,161;CL:0000837,2.86e-19,161;CL:0000094,1.70e-10,8;CL:0002393,1.23e-09,9;CL:0002397,1.23e-09,9;CL:0000081,5.56e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;3.87e-32;42!CL:0000049;6.88e-08;108 | |ontology_enrichment_development_v019=CL:0002057;3.87e-32;42!CL:0000049;6.88e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.73e-46!115;UBERON:0002390!2.01e-30!102;UBERON:0003061!2.01e-30!102;UBERON:0002193!6.69e-27!112;UBERON:0001049!5.78e-25!57;UBERON:0005068!5.78e-25!57;UBERON:0006241!5.78e-25!57;UBERON:0007135!5.78e-25!57;UBERON:0005743!2.66e-22!86;UBERON:0002371!1.25e-21!80;UBERON:0000073!9.54e-21!94;UBERON:0001016!9.54e-21!94;UBERON:0002780!1.10e-20!41;UBERON:0001890!1.10e-20!41;UBERON:0006240!1.10e-20!41;UBERON:0001017!1.24e-20!82;UBERON:0002616!4.85e-20!59;UBERON:0003080!7.43e-20!42;UBERON:0003075!1.52e-19!86;UBERON:0007284!1.52e-19!86;UBERON:0001474!1.98e-19!86;UBERON:0000955!5.85e-19!69;UBERON:0006238!5.85e-19!69;UBERON:0002346!1.93e-18!90;UBERON:0002405!5.29e-18!115;UBERON:0001893!2.22e-17!34;UBERON:0002020!2.45e-17!34;UBERON:0003528!2.45e-17!34;UBERON:0001869!1.05e-16!32;UBERON:0002791!1.18e-16!33;UBERON:0003056!3.45e-15!61;UBERON:0004765!6.64e-15!101;UBERON:0001434!6.64e-15!101;UBERON:0002619!2.44e-14!22;UBERON:0001950!2.94e-13!20;UBERON:0000956!1.32e-12!25;UBERON:0000203!1.32e-12!25;UBERON:0000153!3.31e-09!129;UBERON:0007811!3.31e-09!129;UBERON:0000178!6.93e-09!15;UBERON:0000179!6.93e-09!15;UBERON:0000463!6.93e-09!15;UBERON:0000033!9.48e-09!123;UBERON:0000062!1.13e-07!511;UBERON:0004121!3.41e-07!169;UBERON:0000924!6.44e-07!173;UBERON:0006601!6.44e-07!173;UBERON:0000922!7.85e-07!612 | |ontology_enrichment_uberon=UBERON:0007023!2.73e-46!115;UBERON:0002390!2.01e-30!102;UBERON:0003061!2.01e-30!102;UBERON:0002193!6.69e-27!112;UBERON:0001049!5.78e-25!57;UBERON:0005068!5.78e-25!57;UBERON:0006241!5.78e-25!57;UBERON:0007135!5.78e-25!57;UBERON:0005743!2.66e-22!86;UBERON:0002371!1.25e-21!80;UBERON:0000073!9.54e-21!94;UBERON:0001016!9.54e-21!94;UBERON:0002780!1.10e-20!41;UBERON:0001890!1.10e-20!41;UBERON:0006240!1.10e-20!41;UBERON:0001017!1.24e-20!82;UBERON:0002616!4.85e-20!59;UBERON:0003080!7.43e-20!42;UBERON:0003075!1.52e-19!86;UBERON:0007284!1.52e-19!86;UBERON:0001474!1.98e-19!86;UBERON:0000955!5.85e-19!69;UBERON:0006238!5.85e-19!69;UBERON:0002346!1.93e-18!90;UBERON:0002405!5.29e-18!115;UBERON:0001893!2.22e-17!34;UBERON:0002020!2.45e-17!34;UBERON:0003528!2.45e-17!34;UBERON:0001869!1.05e-16!32;UBERON:0002791!1.18e-16!33;UBERON:0003056!3.45e-15!61;UBERON:0004765!6.64e-15!101;UBERON:0001434!6.64e-15!101;UBERON:0002619!2.44e-14!22;UBERON:0001950!2.94e-13!20;UBERON:0000956!1.32e-12!25;UBERON:0000203!1.32e-12!25;UBERON:0000153!3.31e-09!129;UBERON:0007811!3.31e-09!129;UBERON:0000178!6.93e-09!15;UBERON:0000179!6.93e-09!15;UBERON:0000463!6.93e-09!15;UBERON:0000033!9.48e-09!123;UBERON:0000062!1.13e-07!511;UBERON:0004121!3.41e-07!169;UBERON:0000924!6.44e-07!173;UBERON:0006601!6.44e-07!173;UBERON:0000922!7.85e-07!612 | ||
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| ||
|short_description=p1@GLT1D1 | |short_description=p1@GLT1D1 | ||
}} | }} |
Latest revision as of 07:48, 17 September 2015
Short description: | p1@GLT1D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GLT1D1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000281703, ENST00000442111, NM_144669, uc001uhx.1, uc001uhy.1_5end |
EntrezGene: | GLT1D1 |
HGNC: | 26483 |
UniProt: | Q96MS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.88e-46 | 48 |
phagocyte | 7.88e-46 | 48 |
classical monocyte | 1.12e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.12e-44 | 42 |
myeloid leukocyte | 1.83e-44 | 72 |
monopoietic cell | 2.18e-40 | 59 |
monocyte | 2.18e-40 | 59 |
monoblast | 2.18e-40 | 59 |
promonocyte | 2.18e-40 | 59 |
macrophage dendritic cell progenitor | 1.98e-38 | 61 |
myeloid lineage restricted progenitor cell | 4.57e-34 | 66 |
granulocyte monocyte progenitor cell | 2.83e-33 | 67 |
leukocyte | 2.30e-32 | 136 |
nongranular leukocyte | 1.27e-27 | 115 |
myeloid cell | 2.72e-24 | 108 |
common myeloid progenitor | 2.72e-24 | 108 |
hematopoietic lineage restricted progenitor cell | 3.13e-22 | 120 |
hematopoietic stem cell | 5.91e-22 | 168 |
hematopoietic cell | 1.56e-19 | 177 |
hematopoietic oligopotent progenitor cell | 2.86e-19 | 161 |
hematopoietic multipotent progenitor cell | 2.86e-19 | 161 |
granulocyte | 1.70e-10 | 8 |
intermediate monocyte | 1.23e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.23e-09 | 9 |
blood cell | 5.56e-07 | 11 |