FFCP PHASE1:Hg19::chr20:36149718..36149732,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:36149718..36149732,+
|short_description=p2@NNAT
|description=CAGE_peak_2_at_NNAT_5end
|association_with_transcript=97bp_to_ENST00000346199_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4826 | |EntrezGene=4826 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7860 | |HGNC=7860 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=97bp_to_ENST00000346199_5end | |||
|cluster_id=chr20:36149718..36149732,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_NNAT_5end | |||
|id=chr20:36149718..36149732,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.20e-11!8;CL:0002319!1.67e-10!25;CL:0000540!4.16e-09!6;CL:0000031!4.16e-09!6;CL:0000404!4.16e-09!6;CL:0000128!4.03e-07!7;CL:0000126!4.03e-07!7;CL:0000127!4.03e-07!7;CL:0002453!4.03e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.79e-10;25!CL:0000540;3.35e-09;6!CL:0000404;3.35e-09;6!CL:0000047;1.00e-07;2!CL:0002549;2.14e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.05e-15,8;CL:0002319,1.31e-10,25;CL:0000540,2.16e-09,6;CL:0000031,2.16e-09,6;CL:0000404,2.16e-09,6;CL:0002549,3.63e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.13e-10;82!CL:0000031;3.35e-09;6!UBERON:0006238;1.08e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.59e-59!82;UBERON:0005743!8.62e-58!86;UBERON:0000073!4.31e-54!94;UBERON:0001016!4.31e-54!94;UBERON:0000955!3.66e-46!69;UBERON:0006238!3.66e-46!69;UBERON:0002616!2.68e-45!59;UBERON:0001049!4.01e-45!57;UBERON:0005068!4.01e-45!57;UBERON:0006241!4.01e-45!57;UBERON:0007135!4.01e-45!57;UBERON:0002780!8.92e-39!41;UBERON:0001890!8.92e-39!41;UBERON:0006240!8.92e-39!41;UBERON:0001869!2.18e-38!32;UBERON:0001893!6.64e-38!34;UBERON:0002020!1.45e-37!34;UBERON:0003528!1.45e-37!34;UBERON:0003080!1.46e-37!42;UBERON:0002346!9.00e-37!90;UBERON:0002791!1.88e-36!33;UBERON:0003075!2.79e-36!86;UBERON:0007284!2.79e-36!86;UBERON:0000924!7.70e-33!173;UBERON:0006601!7.70e-33!173;UBERON:0004121!4.85e-32!169;UBERON:0003056!9.00e-32!61;UBERON:0000033!5.43e-31!123;UBERON:0000153!5.99e-31!129;UBERON:0007811!5.99e-31!129;UBERON:0000956!1.01e-29!25;UBERON:0000203!1.01e-29!25;UBERON:0002619!2.41e-26!22;UBERON:0001950!8.07e-24!20;UBERON:0007023!2.43e-17!115;UBERON:0000064!1.94e-13!219;UBERON:0000119!2.58e-11!312;UBERON:0000475!2.82e-11!365;UBERON:0000025!4.56e-11!194;UBERON:0000483!4.12e-10!309;UBERON:0002420!9.00e-10!9;UBERON:0007245!9.00e-10!9;UBERON:0010009!9.00e-10!9;UBERON:0010011!9.00e-10!9;UBERON:0000454!9.00e-10!9;UBERON:0000200!1.01e-09!6;UBERON:0001871!2.28e-09!7;UBERON:0002308!2.90e-09!9;UBERON:0000125!2.90e-09!9;UBERON:0002680!6.17e-09!9;UBERON:0001895!6.17e-09!9;UBERON:0010092!6.17e-09!9;UBERON:0003076!6.50e-09!15;UBERON:0003057!6.50e-09!15;UBERON:0000481!7.66e-09!347;UBERON:0000477!8.84e-09!286;UBERON:0000922!2.52e-08!612;UBERON:0004111!3.04e-08!241;UBERON:0000349!3.56e-08!5;UBERON:0002021!4.00e-08!5;UBERON:0002050!6.35e-08!605;UBERON:0005423!6.35e-08!605;UBERON:0004733!6.48e-08!12;UBERON:0002028!6.48e-08!12;UBERON:0007277!6.48e-08!12;UBERON:0000923!1.42e-07!604;UBERON:0005291!1.42e-07!604;UBERON:0006598!1.42e-07!604;UBERON:0002532!1.42e-07!604;UBERON:0009663!2.96e-07!7;UBERON:0004732!3.78e-07!13;UBERON:0000369!8.44e-07!4;UBERON:0002435!8.44e-07!4;UBERON:0000204!8.44e-07!4;UBERON:0010082!8.44e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.83e-42;32!UBERON:0002619;8.55e-41;22!UBERON:0000956;7.80e-40;25!UBERON:0000203;7.80e-40;25!UBERON:0001950;1.16e-39;20!UBERON:0002791;3.21e-39;32!UBERON:0001893;1.48e-38;34!UBERON:0003528;2.62e-34;34!UBERON:0002020;2.62e-34;34!UBERON:0002780;1.73e-32;41!UBERON:0001890;1.73e-32;41!UBERON:0000955;3.87e-26;68!UBERON:0001017;1.30e-25;75!UBERON:0000073;4.78e-25;53!UBERON:0002616;4.78e-25;53!UBERON:0001016;5.23e-21;83!UBERON:0000200;6.57e-15;6!UBERON:0001871;1.87e-12;6!UBERON:0002021;1.34e-11;5!UBERON:0001870;2.07e-11;3!UBERON:0000349;2.46e-11;5!UBERON:0002420;3.34e-09;9!UBERON:0007245;3.34e-09;9!UBERON:0010009;3.34e-09;9!UBERON:0010011;3.34e-09;9!UBERON:0000454;3.34e-09;9!UBERON:0000369;1.94e-08;4!UBERON:0002435;1.94e-08;4!UBERON:0000204;1.94e-08;4!UBERON:0002702;5.12e-08;2!UBERON:0011216;6.91e-08;132!UBERON:0000007;1.00e-07;2!UBERON:0001876;2.14e-07;2!UBERON:0005629;2.14e-07;2!UBERON:0005358;2.14e-07;2!UBERON:0001886;2.14e-07;2!UBERON:0004086;2.14e-07;2!UBERON:0005282;2.14e-07;2!UBERON:0005281;2.14e-07;2!UBERON:0001872;5.09e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.43e-60,81;UBERON:0001016,1.93e-56,89;UBERON:0000955,5.31e-49,68;UBERON:0006238,5.31e-49,68;UBERON:0001869,1.25e-46,32;UBERON:0002780,4.87e-46,41;UBERON:0001890,4.87e-46,41;UBERON:0003080,4.87e-46,41;UBERON:0006240,4.87e-46,41;UBERON:0001893,1.27e-43,34;UBERON:0002791,3.52e-42,32;UBERON:0002619,5.18e-41,22;UBERON:0000073,2.65e-40,53;UBERON:0002616,2.65e-40,53;UBERON:0000956,4.56e-40,25;UBERON:0000203,4.56e-40,25;UBERON:0001950,6.66e-40,20;UBERON:0003528,1.92e-39,34;UBERON:0002020,1.92e-39,34;UBERON:0001049,8.46e-38,56;UBERON:0005068,8.46e-38,56;UBERON:0006241,8.46e-38,56;UBERON:0007135,8.46e-38,56;UBERON:0003056,9.74e-32,61;UBERON:0004121,1.63e-26,171;UBERON:0000924,1.63e-26,171;UBERON:0006601,1.63e-26,171;UBERON:0003075,7.42e-26,82;UBERON:0007284,7.42e-26,82;UBERON:0002346,2.50e-24,86;UBERON:0011216,1.54e-21,223;UBERON:0010371,1.53e-20,104;UBERON:0000200,8.94e-15,6;UBERON:0010314,1.08e-14,132;UBERON:0007023,9.58e-13,114;UBERON:0001871,1.04e-12,6;UBERON:0002021,1.22e-11,5;UBERON:0000349,1.69e-11,5;UBERON:0001870,2.70e-11,3;UBERON:0002420,2.52e-09,9;UBERON:0007245,2.52e-09,9;UBERON:0010009,2.52e-09,9;UBERON:0010011,2.52e-09,9;UBERON:0000454,2.52e-09,9;UBERON:0000025,1.31e-08,192;UBERON:0000369,2.16e-08,4;UBERON:0002435,2.16e-08,4;UBERON:0000204,2.16e-08,4;UBERON:0010082,2.16e-08,4;UBERON:0002702,7.51e-08,2;UBERON:0001876,1.09e-07,2;UBERON:0000007,1.34e-07,2;UBERON:0005629,3.63e-07,2;UBERON:0005358,3.63e-07,2;UBERON:0001886,3.63e-07,2;UBERON:0004086,3.63e-07,2;UBERON:0005282,3.63e-07,2;UBERON:0005281,3.63e-07,2;UBERON:0001872,4.85e-07,5 | |||
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| ||
|short_description=p2@NNAT | |||
}} | }} |
Latest revision as of 01:33, 16 September 2015
Short description: | p2@NNAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NNAT_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 97bp_to_ENST00000346199_5end |
EntrezGene: | NNAT |
HGNC: | 7860 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.05e-15 | 8 |
neural cell | 1.31e-10 | 25 |
neuron | 2.16e-09 | 6 |
neuroblast | 2.16e-09 | 6 |
electrically signaling cell | 2.16e-09 | 6 |
fibroblast of choroid plexus | 3.63e-07 | 2 |