FFCP PHASE1:Hg19::chr7:100780724..100780737,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:100780724..100780737,+ | |||
|coexpression_cluster_id=C301 | |coexpression_cluster_id=C301 | ||
|description=CAGE_peak_at_chr7:100780724..100780737,+ | |description=CAGE_peak_at_chr7:100780724..100780737,+ | ||
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|ontology_enrichment_celltype=CL:0000222!7.55e-34!119;CL:0000055!8.78e-29!180;CL:0000144!8.54e-28!625;CL:0002371!1.52e-25!591;CL:0000680!3.05e-24!57;CL:0000056!3.05e-24!57;CL:0000355!3.05e-24!57;CL:0000183!2.25e-23!59;CL:0000192!3.11e-23!42;CL:0000514!3.11e-23!42;CL:0000187!1.13e-22!54;CL:0000220!3.27e-22!246;CL:0000359!9.98e-22!32;CL:0002321!1.27e-21!248;CL:0000548!1.59e-21!679;CL:0000004!1.59e-21!679;CL:0000255!1.59e-21!679;CL:0000012!5.90e-21!682;CL:0000393!2.88e-18!60;CL:0000211!2.88e-18!60;CL:0000057!2.68e-15!75;CL:0000003!6.78e-14!722;CL:0000213!6.71e-12!57;CL:0000215!6.71e-12!57;CL:0000048!4.03e-11!430;CL:0000723!5.08e-11!436;CL:0002139!2.90e-10!24;CL:0000034!7.49e-10!444;CL:0000115!3.09e-09!35;CL:0002539!1.62e-08!10;CL:0002078!4.11e-08!44;CL:0000071!8.20e-08!18;CL:0002546!8.20e-08!18;CL:0002494!1.48e-07!16 | |ontology_enrichment_celltype=CL:0000222!7.55e-34!119;CL:0000055!8.78e-29!180;CL:0000144!8.54e-28!625;CL:0002371!1.52e-25!591;CL:0000680!3.05e-24!57;CL:0000056!3.05e-24!57;CL:0000355!3.05e-24!57;CL:0000183!2.25e-23!59;CL:0000192!3.11e-23!42;CL:0000514!3.11e-23!42;CL:0000187!1.13e-22!54;CL:0000220!3.27e-22!246;CL:0000359!9.98e-22!32;CL:0002321!1.27e-21!248;CL:0000548!1.59e-21!679;CL:0000004!1.59e-21!679;CL:0000255!1.59e-21!679;CL:0000012!5.90e-21!682;CL:0000393!2.88e-18!60;CL:0000211!2.88e-18!60;CL:0000057!2.68e-15!75;CL:0000003!6.78e-14!722;CL:0000213!6.71e-12!57;CL:0000215!6.71e-12!57;CL:0000048!4.03e-11!430;CL:0000723!5.08e-11!436;CL:0002139!2.90e-10!24;CL:0000034!7.49e-10!444;CL:0000115!3.09e-09!35;CL:0002539!1.62e-08!10;CL:0002078!4.11e-08!44;CL:0000071!8.20e-08!18;CL:0002546!8.20e-08!18;CL:0002494!1.48e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.33e-25;32!CL:0000192;6.12e-17;43!CL:0000187;2.11e-13;55!CL:0002539;1.44e-11;10!CL:0000134;9.29e-11;55!CL:0002494;1.07e-10;16!CL:0000723;2.85e-10;61!CL:0000393;3.99e-09;61!CL:0000211;3.99e-09;61!CL:0000048;1.33e-08;58!CL:0002139;3.73e-08;24!CL:0000115;1.76e-07;36!CL:0002595;3.38e-07;5!CL:0000034;3.83e-07;69!CL:1000413;4.24e-07;9 | |ontology_enrichment_celltype_v019=CL:0000359;6.33e-25;32!CL:0000192;6.12e-17;43!CL:0000187;2.11e-13;55!CL:0002539;1.44e-11;10!CL:0000134;9.29e-11;55!CL:0002494;1.07e-10;16!CL:0000723;2.85e-10;61!CL:0000393;3.99e-09;61!CL:0000211;3.99e-09;61!CL:0000048;1.33e-08;58!CL:0002139;3.73e-08;24!CL:0000115;1.76e-07;36!CL:0002595;3.38e-07;5!CL:0000034;3.83e-07;69!CL:1000413;4.24e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.85e-30,121;CL:0000359,2.39e-26,32;CL:0000680,5.11e-26,58;CL:0000056,5.11e-26,58;CL:0000355,5.11e-26,58;CL:0000187,7.27e-24,55;CL:0000192,1.32e-23,43;CL:0000514,1.32e-23,43;CL:0000393,4.11e-20,61;CL:0000211,4.11e-20,61;CL:0000048,4.19e-15,427;CL:0000723,2.28e-14,433;CL:0002321,1.44e-13,250;CL:0000034,1.99e-13,441;CL:0002539,1.10e-11,10;CL:0002494,7.10e-11,16;CL:0000057,1.62e-09,76;CL:0002139,3.50e-08,24;CL:0000213,4.18e-08,58;CL:0000215,4.18e-08,58;CL:0000115,4.29e-08,36;CL:1000413,3.85e-07,9;CL:0002595,3.92e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;6.12e-17;43!CL:0000355;6.96e-14;58!CL:0000222;1.59e-08;121 | |ontology_enrichment_development_v019=CL:0000514;6.12e-17;43!CL:0000355;6.96e-14;58!CL:0000222;1.59e-08;121 | ||
|ontology_enrichment_disease=DOID:2394!4.87e-09!14 | |ontology_enrichment_disease=DOID:2394!4.87e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;6.79e-13;14 | |ontology_enrichment_disease_v019=DOID:2394;6.79e-13;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,8.69e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!6.21e-33!79;UBERON:0007798!6.21e-33!79;UBERON:0004872!7.27e-31!84;UBERON:0000055!1.29e-30!69;UBERON:0001981!8.46e-28!60;UBERON:0007500!8.46e-28!60;UBERON:0004537!8.46e-28!60;UBERON:0006965!8.46e-28!60;UBERON:0001637!1.10e-27!42;UBERON:0003509!1.10e-27!42;UBERON:0004572!1.10e-27!42;UBERON:0004535!3.16e-26!110;UBERON:0003914!7.43e-26!118;UBERON:0001009!2.06e-25!113;UBERON:0000490!1.53e-23!138;UBERON:0004290!5.01e-23!70;UBERON:0000486!1.69e-22!82;UBERON:0000914!5.54e-22!83;UBERON:0002329!5.54e-22!83;UBERON:0003077!5.54e-22!83;UBERON:0003059!5.54e-22!83;UBERON:0007282!5.54e-22!83;UBERON:0009618!5.54e-22!83;UBERON:0007285!5.54e-22!83;UBERON:0004573!2.15e-21!33;UBERON:0004571!2.15e-21!33;UBERON:0001134!3.88e-21!61;UBERON:0002036!3.88e-21!61;UBERON:0003082!3.88e-21!61;UBERON:0002385!1.82e-20!63;UBERON:0001015!1.82e-20!63;UBERON:0000383!1.82e-20!63;UBERON:0005256!4.71e-19!143;UBERON:0002100!3.77e-14!216;UBERON:0000947!2.62e-13!21;UBERON:0010191!2.62e-13!21;UBERON:0000119!4.12e-13!312;UBERON:0000483!1.49e-12!309;UBERON:0000475!1.86e-09!365;UBERON:0004111!1.43e-08!241;UBERON:0004237!1.62e-08!10;UBERON:0004695!1.62e-08!10;UBERON:0002111!1.62e-08!10;UBERON:0004178!1.62e-08!10;UBERON:0001135!1.65e-08!15;UBERON:0000487!1.73e-08!22;UBERON:0000477!2.01e-08!286;UBERON:0000926!3.07e-08!448;UBERON:0004120!3.07e-08!448;UBERON:0006603!3.07e-08!448;UBERON:0003104!4.55e-08!238;UBERON:0009142!4.55e-08!238;UBERON:0006914!5.17e-08!25;UBERON:0000468!7.47e-08!659;UBERON:0001986!8.20e-08!18;UBERON:0004638!8.20e-08!18;UBERON:0004852!8.20e-08!18;UBERON:0000467!1.00e-07!625;UBERON:0000480!1.32e-07!626;UBERON:0000025!1.50e-07!194;UBERON:0003513!8.37e-07!8 | |ontology_enrichment_uberon=UBERON:0002049!6.21e-33!79;UBERON:0007798!6.21e-33!79;UBERON:0004872!7.27e-31!84;UBERON:0000055!1.29e-30!69;UBERON:0001981!8.46e-28!60;UBERON:0007500!8.46e-28!60;UBERON:0004537!8.46e-28!60;UBERON:0006965!8.46e-28!60;UBERON:0001637!1.10e-27!42;UBERON:0003509!1.10e-27!42;UBERON:0004572!1.10e-27!42;UBERON:0004535!3.16e-26!110;UBERON:0003914!7.43e-26!118;UBERON:0001009!2.06e-25!113;UBERON:0000490!1.53e-23!138;UBERON:0004290!5.01e-23!70;UBERON:0000486!1.69e-22!82;UBERON:0000914!5.54e-22!83;UBERON:0002329!5.54e-22!83;UBERON:0003077!5.54e-22!83;UBERON:0003059!5.54e-22!83;UBERON:0007282!5.54e-22!83;UBERON:0009618!5.54e-22!83;UBERON:0007285!5.54e-22!83;UBERON:0004573!2.15e-21!33;UBERON:0004571!2.15e-21!33;UBERON:0001134!3.88e-21!61;UBERON:0002036!3.88e-21!61;UBERON:0003082!3.88e-21!61;UBERON:0002385!1.82e-20!63;UBERON:0001015!1.82e-20!63;UBERON:0000383!1.82e-20!63;UBERON:0005256!4.71e-19!143;UBERON:0002100!3.77e-14!216;UBERON:0000947!2.62e-13!21;UBERON:0010191!2.62e-13!21;UBERON:0000119!4.12e-13!312;UBERON:0000483!1.49e-12!309;UBERON:0000475!1.86e-09!365;UBERON:0004111!1.43e-08!241;UBERON:0004237!1.62e-08!10;UBERON:0004695!1.62e-08!10;UBERON:0002111!1.62e-08!10;UBERON:0004178!1.62e-08!10;UBERON:0001135!1.65e-08!15;UBERON:0000487!1.73e-08!22;UBERON:0000477!2.01e-08!286;UBERON:0000926!3.07e-08!448;UBERON:0004120!3.07e-08!448;UBERON:0006603!3.07e-08!448;UBERON:0003104!4.55e-08!238;UBERON:0009142!4.55e-08!238;UBERON:0006914!5.17e-08!25;UBERON:0000468!7.47e-08!659;UBERON:0001986!8.20e-08!18;UBERON:0004638!8.20e-08!18;UBERON:0004852!8.20e-08!18;UBERON:0000467!1.00e-07!625;UBERON:0000480!1.32e-07!626;UBERON:0000025!1.50e-07!194;UBERON:0003513!8.37e-07!8 | ||
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| ||
|short_description=p@chr7:100780724..100780737,+ | |short_description=p@chr7:100780724..100780737,+ | ||
}} | }} |
Latest revision as of 04:16, 31 July 2015
Short description: | p@chr7:100780724..100780737, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:100780724..100780737, + |
Coexpression cluster: | C301_Smooth_mesenchymal_Endothelial_Hepatic_basal_hepatic_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.85e-30 | 121 |
vascular associated smooth muscle cell | 2.39e-26 | 32 |
muscle precursor cell | 5.11e-26 | 58 |
myoblast | 5.11e-26 | 58 |
multi-potent skeletal muscle stem cell | 5.11e-26 | 58 |
muscle cell | 7.27e-24 | 55 |
smooth muscle cell | 1.32e-23 | 43 |
smooth muscle myoblast | 1.32e-23 | 43 |
electrically responsive cell | 4.11e-20 | 61 |
electrically active cell | 4.11e-20 | 61 |
multi fate stem cell | 4.19e-15 | 427 |
somatic stem cell | 2.28e-14 | 433 |
embryonic cell | 1.44e-13 | 250 |
stem cell | 1.99e-13 | 441 |
aortic smooth muscle cell | 1.10e-11 | 10 |
cardiocyte | 7.10e-11 | 16 |
fibroblast | 1.62e-09 | 76 |
endothelial cell of vascular tree | 3.50e-08 | 24 |
lining cell | 4.18e-08 | 58 |
barrier cell | 4.18e-08 | 58 |
endothelial cell | 4.29e-08 | 36 |
endothelial cell of artery | 3.85e-07 | 9 |
smooth muscle cell of the subclavian artery | 3.92e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.69e-13 | 14 |