FFCP PHASE1:Hg19::chr6:70992825..70992836,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1297 | |EntrezGene=1297 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2217 | |HGNC=2217 | ||
|TSSclassifier=strong | |||
|UniProt=A6NEQ6 | |UniProt=A6NEQ6 | ||
|association_with_transcript=-70bp_to_ENST00000370499_5end | |association_with_transcript=-70bp_to_ENST00000370499_5end | ||
|cluster_id=chr6:70992825..70992836,- | |||
|coexpression_cluster_id=C41 | |coexpression_cluster_id=C41 | ||
|description=CAGE_peak_4_at_COL9A1_5end | |description=CAGE_peak_4_at_COL9A1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!1.46e-13!5 | |ontology_enrichment_celltype=CL:0002322!1.46e-13!5 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;2.06e-15;1!UBERON:0010122;2.31e-08;2 | |ontology_enrichment_development_v019=UBERON:0004140;2.06e-15;1!UBERON:0010122;2.31e-08;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.40e-65!57;UBERON:0005068!1.40e-65!57;UBERON:0006241!1.40e-65!57;UBERON:0007135!1.40e-65!57;UBERON:0002616!1.20e-59!59;UBERON:0003075!4.64e-56!86;UBERON:0007284!4.64e-56!86;UBERON:0002346!4.42e-53!90;UBERON:0002780!8.92e-53!41;UBERON:0001890!8.92e-53!41;UBERON:0006240!8.92e-53!41;UBERON:0005743!1.19e-52!86;UBERON:0001017!1.28e-52!82;UBERON:0000955!5.10e-52!69;UBERON:0006238!5.10e-52!69;UBERON:0002020!1.21e-51!34;UBERON:0003528!1.21e-51!34;UBERON:0001893!1.82e-51!34;UBERON:0003080!2.35e-51!42;UBERON:0002791!3.29e-49!33;UBERON:0000073!4.91e-49!94;UBERON:0001016!4.91e-49!94;UBERON:0001869!5.25e-46!32;UBERON:0003056!2.43e-41!61;UBERON:0002619!4.55e-38!22;UBERON:0007023!1.97e-37!115;UBERON:0000956!8.48e-37!25;UBERON:0000203!8.48e-37!25;UBERON:0001950!1.15e-32!20;UBERON:0000033!4.96e-32!123;UBERON:0000153!1.11e-31!129;UBERON:0007811!1.11e-31!129;UBERON:0004121!9.57e-30!169;UBERON:0000924!8.67e-29!173;UBERON:0006601!8.67e-29!173;UBERON:0002298!1.07e-18!8;UBERON:0001871!5.62e-18!7;UBERON:0000025!1.63e-17!194;UBERON:0000200!2.14e-17!6;UBERON:0002420!3.36e-16!9;UBERON:0007245!3.36e-16!9;UBERON:0010009!3.36e-16!9;UBERON:0010011!3.36e-16!9;UBERON:0000454!3.36e-16!9;UBERON:0002308!4.32e-16!9;UBERON:0000125!4.32e-16!9;UBERON:0000349!1.88e-15!5;UBERON:0004733!3.14e-15!12;UBERON:0002028!3.14e-15!12;UBERON:0007277!3.14e-15!12;UBERON:0003076!7.99e-15!15;UBERON:0003057!7.99e-15!15;UBERON:0000064!2.33e-14!219;UBERON:0004732!6.09e-14!13;UBERON:0000483!1.24e-13!309;UBERON:0000119!2.21e-13!312;UBERON:0000477!3.97e-12!286;UBERON:0004111!4.89e-12!241;UBERON:0009663!4.92e-11!7;UBERON:0001896!1.68e-10!3;UBERON:0005290!1.68e-10!3;UBERON:0010096!1.68e-10!3;UBERON:0006331!4.34e-10!3;UBERON:0002771!7.46e-10!3;UBERON:0000988!8.41e-10!3;UBERON:0001872!9.39e-10!5;UBERON:0000475!2.61e-08!365;UBERON:0002680!4.43e-08!9;UBERON:0001895!4.43e-08!9;UBERON:0010092!4.43e-08!9;UBERON:0000481!5.57e-08!347;UBERON:0000369!1.66e-07!4;UBERON:0002435!1.66e-07!4;UBERON:0000204!1.66e-07!4;UBERON:0010082!1.66e-07!4;UBERON:0001954!1.95e-07!2;UBERON:0003022!1.95e-07!2;UBERON:0002421!1.95e-07!2;UBERON:0002600!1.95e-07!2;UBERON:0000922!2.61e-07!612;UBERON:0001876!3.00e-07!2;UBERON:0002148!4.19e-07!2;UBERON:0009662!4.19e-07!2;UBERON:0001870!4.45e-07!2 | |ontology_enrichment_uberon=UBERON:0001049!1.40e-65!57;UBERON:0005068!1.40e-65!57;UBERON:0006241!1.40e-65!57;UBERON:0007135!1.40e-65!57;UBERON:0002616!1.20e-59!59;UBERON:0003075!4.64e-56!86;UBERON:0007284!4.64e-56!86;UBERON:0002346!4.42e-53!90;UBERON:0002780!8.92e-53!41;UBERON:0001890!8.92e-53!41;UBERON:0006240!8.92e-53!41;UBERON:0005743!1.19e-52!86;UBERON:0001017!1.28e-52!82;UBERON:0000955!5.10e-52!69;UBERON:0006238!5.10e-52!69;UBERON:0002020!1.21e-51!34;UBERON:0003528!1.21e-51!34;UBERON:0001893!1.82e-51!34;UBERON:0003080!2.35e-51!42;UBERON:0002791!3.29e-49!33;UBERON:0000073!4.91e-49!94;UBERON:0001016!4.91e-49!94;UBERON:0001869!5.25e-46!32;UBERON:0003056!2.43e-41!61;UBERON:0002619!4.55e-38!22;UBERON:0007023!1.97e-37!115;UBERON:0000956!8.48e-37!25;UBERON:0000203!8.48e-37!25;UBERON:0001950!1.15e-32!20;UBERON:0000033!4.96e-32!123;UBERON:0000153!1.11e-31!129;UBERON:0007811!1.11e-31!129;UBERON:0004121!9.57e-30!169;UBERON:0000924!8.67e-29!173;UBERON:0006601!8.67e-29!173;UBERON:0002298!1.07e-18!8;UBERON:0001871!5.62e-18!7;UBERON:0000025!1.63e-17!194;UBERON:0000200!2.14e-17!6;UBERON:0002420!3.36e-16!9;UBERON:0007245!3.36e-16!9;UBERON:0010009!3.36e-16!9;UBERON:0010011!3.36e-16!9;UBERON:0000454!3.36e-16!9;UBERON:0002308!4.32e-16!9;UBERON:0000125!4.32e-16!9;UBERON:0000349!1.88e-15!5;UBERON:0004733!3.14e-15!12;UBERON:0002028!3.14e-15!12;UBERON:0007277!3.14e-15!12;UBERON:0003076!7.99e-15!15;UBERON:0003057!7.99e-15!15;UBERON:0000064!2.33e-14!219;UBERON:0004732!6.09e-14!13;UBERON:0000483!1.24e-13!309;UBERON:0000119!2.21e-13!312;UBERON:0000477!3.97e-12!286;UBERON:0004111!4.89e-12!241;UBERON:0009663!4.92e-11!7;UBERON:0001896!1.68e-10!3;UBERON:0005290!1.68e-10!3;UBERON:0010096!1.68e-10!3;UBERON:0006331!4.34e-10!3;UBERON:0002771!7.46e-10!3;UBERON:0000988!8.41e-10!3;UBERON:0001872!9.39e-10!5;UBERON:0000475!2.61e-08!365;UBERON:0002680!4.43e-08!9;UBERON:0001895!4.43e-08!9;UBERON:0010092!4.43e-08!9;UBERON:0000481!5.57e-08!347;UBERON:0000369!1.66e-07!4;UBERON:0002435!1.66e-07!4;UBERON:0000204!1.66e-07!4;UBERON:0010082!1.66e-07!4;UBERON:0001954!1.95e-07!2;UBERON:0003022!1.95e-07!2;UBERON:0002421!1.95e-07!2;UBERON:0002600!1.95e-07!2;UBERON:0000922!2.61e-07!612;UBERON:0001876!3.00e-07!2;UBERON:0002148!4.19e-07!2;UBERON:0009662!4.19e-07!2;UBERON:0001870!4.45e-07!2 | ||
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|short_description=p4@COL9A1 | |short_description=p4@COL9A1 | ||
}} | }} |
Latest revision as of 15:22, 19 September 2015
Short description: | p4@COL9A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_COL9A1_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | -70bp_to_ENST00000370499_5end |
EntrezGene: | COL9A1 |
HGNC: | 2217 |
UniProt: | A6NEQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data