FFCP PHASE1:Hg19::chr10:119806476..119806520,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=22933 | |HGNC=22933 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000426021,ENST00000454781_5end | |association_with_transcript=0bp_to_ENST00000426021,ENST00000454781_5end | ||
|cluster_id=chr10:119806476..119806520,+ | |||
|coexpression_cluster_id=C522 | |coexpression_cluster_id=C522 | ||
|description=CAGE_peak_1_at_CASC2_5end | |description=CAGE_peak_1_at_CASC2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.43e-11;82 | |ontology_enrichment_development_v019=UBERON:0006601;6.43e-11;82 | ||
|ontology_enrichment_disease=DOID:0050687!5.89e-11!143;DOID:305!1.70e-08!106 | |ontology_enrichment_disease=DOID:0050687!5.89e-11!143;DOID:305!1.70e-08!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.41e-09,143;DOID:305,3.53e-07,106 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;1.98e-19;41!UBERON:0001890;1.98e-19;41!UBERON:0003528;6.10e-19;34!UBERON:0002020;6.10e-19;34!UBERON:0001893;8.19e-19;34!UBERON:0001869;9.73e-19;32!UBERON:0002791;9.80e-19;32!UBERON:0000073;7.48e-18;53!UBERON:0002616;7.48e-18;53!UBERON:0000956;8.08e-16;25!UBERON:0000203;8.08e-16;25!UBERON:0002619;4.27e-15;22!UBERON:0001950;1.05e-13;20!UBERON:0000955;1.57e-13;68!UBERON:0001017;6.75e-13;75!UBERON:0001016;9.89e-13;83!UBERON:0007023;2.88e-08;114!UBERON:0000125;1.10e-07;9!UBERON:0002308;1.10e-07;9!UBERON:0002420;1.64e-07;9!UBERON:0007245;1.64e-07;9!UBERON:0010009;1.64e-07;9!UBERON:0010011;1.64e-07;9!UBERON:0000454;1.64e-07;9!UBERON:0011216;2.37e-07;132 | |ontology_enrichment_uberon_v019=UBERON:0002780;1.98e-19;41!UBERON:0001890;1.98e-19;41!UBERON:0003528;6.10e-19;34!UBERON:0002020;6.10e-19;34!UBERON:0001893;8.19e-19;34!UBERON:0001869;9.73e-19;32!UBERON:0002791;9.80e-19;32!UBERON:0000073;7.48e-18;53!UBERON:0002616;7.48e-18;53!UBERON:0000956;8.08e-16;25!UBERON:0000203;8.08e-16;25!UBERON:0002619;4.27e-15;22!UBERON:0001950;1.05e-13;20!UBERON:0000955;1.57e-13;68!UBERON:0001017;6.75e-13;75!UBERON:0001016;9.89e-13;83!UBERON:0007023;2.88e-08;114!UBERON:0000125;1.10e-07;9!UBERON:0002308;1.10e-07;9!UBERON:0002420;1.64e-07;9!UBERON:0007245;1.64e-07;9!UBERON:0010009;1.64e-07;9!UBERON:0010011;1.64e-07;9!UBERON:0000454;1.64e-07;9!UBERON:0011216;2.37e-07;132 | ||
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| ||
|short_description=p1@CASC2 | |short_description=p1@CASC2 | ||
}} | }} |
Latest revision as of 16:12, 16 September 2015
Short description: | p1@CASC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CASC2_5end |
Coexpression cluster: | C522_pituitary_medulla_lung_testis_caudate_epididymis_thyroid |
Association with transcript: | 0bp_to_ENST00000426021, ENST00000454781_5end |
EntrezGene: | NA |
HGNC: | 22933 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.41e-09 | 143 |
carcinoma | 3.53e-07 | 106 |