FFCP PHASE1:Hg19::chr12:20848316..20848349,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53919 | |EntrezGene=53919 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13819 | |HGNC=13819 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6S4 | |UniProt=F5H6S4 | ||
|association_with_transcript=-15bp_to_ENST00000539415_5end | |association_with_transcript=-15bp_to_ENST00000539415_5end | ||
|cluster_id=chr12:20848316..20848349,+ | |||
|coexpression_cluster_id=C1305 | |coexpression_cluster_id=C1305 | ||
|description=CAGE_peak_3_at_SLCO1C1_5end | |description=CAGE_peak_3_at_SLCO1C1_5end | ||
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|ontology_enrichment_celltype=CL:0000047!5.05e-10!8;CL:0000540!5.72e-07!6;CL:0000031!5.72e-07!6;CL:0000404!5.72e-07!6 | |ontology_enrichment_celltype=CL:0000047!5.05e-10!8;CL:0000540!5.72e-07!6;CL:0000031!5.72e-07!6;CL:0000404!5.72e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000047;3.96e-08;2!CL:0002575;9.54e-08;2 | |ontology_enrichment_celltype_v019=CL:0000047;3.96e-08;2!CL:0002575;9.54e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,6.59e-11,8;CL:0002575,9.59e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.78e-12;82 | |ontology_enrichment_development_v019=UBERON:0006601;4.78e-12;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p3@SLCO1C1 | |short_description=p3@SLCO1C1 | ||
}} | }} |
Latest revision as of 19:05, 17 September 2015
Short description: | p3@SLCO1C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLCO1C1_5end |
Coexpression cluster: | C1305_neuroectodermal_medulla_retina_peripheral_hippocampus_caudate_pituitary |
Association with transcript: | -15bp_to_ENST00000539415_5end |
EntrezGene: | SLCO1C1 |
HGNC: | 13819 |
UniProt: | F5H6S4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 6.59e-11 | 8 |
central nervous system pericyte | 9.59e-08 | 2 |