FFCP PHASE1:Hg19::chr17:8055699..8055729,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5187 | |EntrezGene=5187 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8845 | |HGNC=8845 | ||
|TSSclassifier=strong | |||
|UniProt=O15534 | |UniProt=O15534 | ||
|association_with_transcript=23bp_to_ENST00000317276,NM_002616,uc002gkd.2_5end | |association_with_transcript=23bp_to_ENST00000317276,NM_002616,uc002gkd.2_5end | ||
|cluster_id=chr17:8055699..8055729,- | |||
|description=CAGE_peak_2_at_PER1_5end | |description=CAGE_peak_2_at_PER1_5end | ||
|id=chr17:8055699..8055729,- | |id=chr17:8055699..8055729,- | ||
|ontology_enrichment_celltype=CL:0002057!2.75e-14!42;CL:0000860!5.87e-12!45;CL:0000766!4.19e-10!76;CL:0000557!6.32e-08!71;CL:0002009!4.47e-07!65;CL:0000094!9.16e-07!8 | |ontology_enrichment_celltype=CL:0002057!2.75e-14!42;CL:0000860!5.87e-12!45;CL:0000766!4.19e-10!76;CL:0000557!6.32e-08!71;CL:0002009!4.47e-07!65;CL:0000094!9.16e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.58e-09;33!CL:0002057;3.58e-09;33!CL:0000576;1.35e-08;48!CL:0000766;5.10e-07;69!CL:0000094;9.00e-07;8 | |ontology_enrichment_celltype_v019=CL:0000860;3.58e-09;33!CL:0002057;3.58e-09;33!CL:0000576;1.35e-08;48!CL:0000766;5.10e-07;69!CL:0000094;9.00e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.73e-14,42;CL:0002057,2.73e-14,42;CL:0000766,1.05e-11,72;CL:0000473,2.17e-11,48;CL:0000234,2.17e-11,48;CL:0000557,2.48e-09,67;CL:0002009,1.79e-08,61;CL:0002194,1.22e-07,59;CL:0000576,1.22e-07,59;CL:0000040,1.22e-07,59;CL:0000559,1.22e-07,59;CL:0000738,1.44e-07,136;CL:0000839,6.12e-07,66;CL:0000094,9.12e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.56e-10;42 | |ontology_enrichment_development_v019=CL:0002057;1.56e-10;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.93e-25!115;UBERON:0001049!1.30e-13!57;UBERON:0005068!1.30e-13!57;UBERON:0006241!1.30e-13!57;UBERON:0007135!1.30e-13!57;UBERON:0002616!8.24e-13!59;UBERON:0002346!3.45e-12!90;UBERON:0000955!1.05e-11!69;UBERON:0006238!1.05e-11!69;UBERON:0003075!1.35e-11!86;UBERON:0007284!1.35e-11!86;UBERON:0001017!2.59e-11!82;UBERON:0005743!1.45e-10!86;UBERON:0000073!1.08e-09!94;UBERON:0001016!1.08e-09!94;UBERON:0000479!1.79e-09!787;UBERON:0003080!3.25e-09!42;UBERON:0002780!9.08e-09!41;UBERON:0001890!9.08e-09!41;UBERON:0006240!9.08e-09!41;UBERON:0001474!1.01e-08!86;UBERON:0002371!2.30e-08!80;UBERON:0002390!5.15e-08!102;UBERON:0003061!5.15e-08!102;UBERON:0002193!7.39e-08!112;UBERON:0002405!1.07e-07!115;UBERON:0003056!1.12e-07!61;UBERON:0001893!8.83e-07!34;UBERON:0002020!9.23e-07!34;UBERON:0003528!9.23e-07!34 | |ontology_enrichment_uberon=UBERON:0007023!2.93e-25!115;UBERON:0001049!1.30e-13!57;UBERON:0005068!1.30e-13!57;UBERON:0006241!1.30e-13!57;UBERON:0007135!1.30e-13!57;UBERON:0002616!8.24e-13!59;UBERON:0002346!3.45e-12!90;UBERON:0000955!1.05e-11!69;UBERON:0006238!1.05e-11!69;UBERON:0003075!1.35e-11!86;UBERON:0007284!1.35e-11!86;UBERON:0001017!2.59e-11!82;UBERON:0005743!1.45e-10!86;UBERON:0000073!1.08e-09!94;UBERON:0001016!1.08e-09!94;UBERON:0000479!1.79e-09!787;UBERON:0003080!3.25e-09!42;UBERON:0002780!9.08e-09!41;UBERON:0001890!9.08e-09!41;UBERON:0006240!9.08e-09!41;UBERON:0001474!1.01e-08!86;UBERON:0002371!2.30e-08!80;UBERON:0002390!5.15e-08!102;UBERON:0003061!5.15e-08!102;UBERON:0002193!7.39e-08!112;UBERON:0002405!1.07e-07!115;UBERON:0003056!1.12e-07!61;UBERON:0001893!8.83e-07!34;UBERON:0002020!9.23e-07!34;UBERON:0003528!9.23e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.06e-07;114!UBERON:0000073;3.91e-07;53!UBERON:0002616;3.91e-07;53 | |ontology_enrichment_uberon_v019=UBERON:0007023;2.06e-07;114!UBERON:0000073;3.91e-07;53!UBERON:0002616;3.91e-07;53 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.74e-25,114;UBERON:0000479,2.53e-14,773;UBERON:0002346,1.86e-13,86;UBERON:0001049,3.85e-13,56;UBERON:0005068,3.85e-13,56;UBERON:0006241,3.85e-13,56;UBERON:0007135,3.85e-13,56;UBERON:0003075,7.37e-13,82;UBERON:0007284,7.37e-13,82;UBERON:0000073,3.07e-12,53;UBERON:0002616,3.07e-12,53;UBERON:0000955,2.79e-11,68;UBERON:0006238,2.79e-11,68;UBERON:0001017,6.50e-11,81;UBERON:0001474,4.75e-10,82;UBERON:0001016,5.84e-10,89;UBERON:0010371,7.83e-10,104;UBERON:0002371,1.02e-09,76;UBERON:0002405,1.26e-09,93;UBERON:0004765,1.57e-09,90;UBERON:0010314,3.05e-09,132;UBERON:0002390,3.89e-09,98;UBERON:0003061,3.89e-09,98;UBERON:0002193,6.68e-09,108;UBERON:0002780,9.03e-09,41;UBERON:0001890,9.03e-09,41;UBERON:0003080,9.03e-09,41;UBERON:0006240,9.03e-09,41;UBERON:0001434,4.92e-08,100;UBERON:0000923,1.07e-07,560;UBERON:0010316,1.07e-07,560;UBERON:0005291,1.07e-07,560;UBERON:0006598,1.07e-07,560;UBERON:0010317,1.07e-07,560;UBERON:0002532,1.07e-07,560;UBERON:0003056,1.39e-07,61;UBERON:0002050,2.69e-07,564;UBERON:0005423,4.28e-07,581;UBERON:0003081,4.44e-07,203;UBERON:0001893,8.80e-07,34;UBERON:0003528,9.19e-07,34;UBERON:0002020,9.19e-07,34 | |||
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| ||
|short_description=p2@PER1 | |short_description=p2@PER1 | ||
}} | }} |
Latest revision as of 13:11, 18 September 2015
Short description: | p2@PER1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PER1_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000317276, NM_002616, uc002gkd.2_5end |
EntrezGene: | PER1 |
HGNC: | 8845 |
UniProt: | O15534 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.73e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.73e-14 | 42 |
myeloid leukocyte | 1.05e-11 | 72 |
defensive cell | 2.17e-11 | 48 |
phagocyte | 2.17e-11 | 48 |
granulocyte monocyte progenitor cell | 2.48e-09 | 67 |
macrophage dendritic cell progenitor | 1.79e-08 | 61 |
monopoietic cell | 1.22e-07 | 59 |
monocyte | 1.22e-07 | 59 |
monoblast | 1.22e-07 | 59 |
promonocyte | 1.22e-07 | 59 |
leukocyte | 1.44e-07 | 136 |
myeloid lineage restricted progenitor cell | 6.12e-07 | 66 |
granulocyte | 9.12e-07 | 8 |