FFCP PHASE1:Hg19::chr3:113557712..113557755,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:113557712..113557755,+
|short_description=p1@GRAMD1C
|description=CAGE_peak_1_at_GRAMD1C_5end
|association_with_transcript=0bp_to_ENST00000463760,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54762 | |EntrezGene=54762 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25252 | |HGNC=25252 | ||
|TSSclassifier=strong | |||
|UniProt=F8WC28,B4DF12,F8WCA8 | |UniProt=F8WC28,B4DF12,F8WCA8 | ||
|association_with_transcript=0bp_to_ENST00000463760,ENST00000472384,ENST00000484714,ENST00000486457_5end | |||
|cluster_id=chr3:113557712..113557755,+ | |||
|description=CAGE_peak_1_at_GRAMD1C_5end | |||
|id=chr3:113557712..113557755,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.73e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.29e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,9.53e-08,36;CL:0002139,3.76e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.62e-28!57;UBERON:0005068!4.62e-28!57;UBERON:0006241!4.62e-28!57;UBERON:0007135!4.62e-28!57;UBERON:0003075!3.26e-24!86;UBERON:0007284!3.26e-24!86;UBERON:0002616!1.65e-23!59;UBERON:0005743!3.45e-23!86;UBERON:0001017!6.37e-23!82;UBERON:0002346!6.96e-23!90;UBERON:0000955!1.77e-22!69;UBERON:0006238!1.77e-22!69;UBERON:0000025!5.95e-21!194;UBERON:0003080!6.62e-21!42;UBERON:0000477!9.35e-21!286;UBERON:0002780!1.57e-20!41;UBERON:0001890!1.57e-20!41;UBERON:0006240!1.57e-20!41;UBERON:0000073!4.74e-20!94;UBERON:0001016!4.74e-20!94;UBERON:0004111!4.43e-19!241;UBERON:0000119!1.56e-18!312;UBERON:0002020!2.24e-18!34;UBERON:0003528!2.24e-18!34;UBERON:0007023!2.41e-18!115;UBERON:0000483!2.57e-18!309;UBERON:0003056!3.38e-18!61;UBERON:0000033!7.71e-18!123;UBERON:0001893!1.00e-17!34;UBERON:0000153!3.23e-17!129;UBERON:0007811!3.23e-17!129;UBERON:0002791!3.37e-17!33;UBERON:0001869!4.88e-17!32;UBERON:0002619!2.94e-13!22;UBERON:0000475!1.04e-12!365;UBERON:0000956!1.31e-12!25;UBERON:0000203!1.31e-12!25;UBERON:0004121!3.92e-12!169;UBERON:0001950!6.43e-12!20;UBERON:0000481!1.00e-11!347;UBERON:0000924!1.03e-11!173;UBERON:0006601!1.03e-11!173;UBERON:0003076!2.73e-08!15;UBERON:0003057!2.73e-08!15;UBERON:0000480!3.72e-08!626;UBERON:0000467!4.49e-08!625;UBERON:0002308!2.11e-07!9;UBERON:0000125!2.11e-07!9;UBERON:0000064!2.60e-07!219;UBERON:0002420!4.48e-07!9;UBERON:0007245!4.48e-07!9;UBERON:0010009!4.48e-07!9;UBERON:0010011!4.48e-07!9;UBERON:0000454!4.48e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.10e-18;34!UBERON:0002020;1.10e-18;34!UBERON:0002780;2.27e-18;41!UBERON:0001890;2.27e-18;41!UBERON:0002791;2.57e-18;32!UBERON:0001869;3.36e-18;32!UBERON:0001893;7.07e-18;34!UBERON:0000073;8.28e-18;53!UBERON:0002616;8.28e-18;53!UBERON:0002619;2.65e-17;22!UBERON:0001950;2.05e-15;20!UBERON:0000956;3.33e-14;25!UBERON:0000203;3.33e-14;25!UBERON:0001017;7.76e-13;75!UBERON:0000955;1.28e-12;68!UBERON:0001016;1.66e-11;83!UBERON:0000125;7.34e-10;9!UBERON:0002308;7.34e-10;9!UBERON:0002420;4.25e-09;9!UBERON:0007245;4.25e-09;9!UBERON:0010009;4.25e-09;9!UBERON:0010011;4.25e-09;9!UBERON:0000454;4.25e-09;9!UBERON:0009663;5.31e-08;7!UBERON:0004733;3.46e-07;12!UBERON:0002028;3.46e-07;12!UBERON:0002298;6.38e-07;6 | |||
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| ||
|short_description=p1@GRAMD1C | |||
}} | }} |
Latest revision as of 16:17, 19 September 2015
Short description: | p1@GRAMD1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRAMD1C_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000463760, ENST00000472384, ENST00000484714, ENST00000486457_5end |
EntrezGene: | GRAMD1C |
HGNC: | 25252 |
UniProt: | F8WC28B4DF12F8WCA8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 9.53e-08 | 36 |
endothelial cell of vascular tree | 3.76e-07 | 24 |