FFCP PHASE1:Hg19::chr6:11537971..11538030,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:11537971..11538030,+
|short_description=p1@TMEM170B
|description=CAGE_peak_1_at_TMEM170B_5end
|association_with_transcript=-480bp_to_ENST00000379426,NM_001...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100113407 | |EntrezGene=100113407 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34244 | |HGNC=34244 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T4T1 | |UniProt=Q5T4T1 | ||
|association_with_transcript=-480bp_to_ENST00000379426,NM_001100829,uc010jpa.2_5end | |||
|cluster_id=chr6:11537971..11538030,+ | |||
|coexpression_cluster_id=C4548 | |||
|description=CAGE_peak_1_at_TMEM170B_5end | |||
|id=chr6:11537971..11538030,+ | |||
|ontology_enrichment_celltype=CL:0000766!5.96e-32!76;CL:0000738!5.60e-31!140;CL:0000037!3.32e-30!172;CL:0000566!3.32e-30!172;CL:0000988!9.73e-28!182;CL:0000557!8.50e-27!71;CL:0002032!1.84e-26!165;CL:0000837!1.84e-26!165;CL:0002194!4.15e-26!63;CL:0000576!4.15e-26!63;CL:0000040!4.15e-26!63;CL:0000559!4.15e-26!63;CL:0000763!8.29e-26!112;CL:0000049!8.29e-26!112;CL:0002057!8.69e-26!42;CL:0002009!1.40e-25!65;CL:0000839!2.37e-25!70;CL:0002087!3.02e-25!119;CL:0000860!2.01e-23!45;CL:0002031!2.91e-23!124;CL:0002393!4.39e-07!9;CL:0002397!4.39e-07!9;CL:0000094!8.55e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.54e-20;33!CL:0002057;5.54e-20;33!CL:0000576;7.26e-20;48!CL:0000473;1.95e-18;39!CL:0000234;1.95e-18;39!CL:0000766;3.23e-16;69!CL:0000763;2.75e-10;100!CL:0002087;2.07e-09;104!CL:0000738;7.34e-08;136!CL:0000094;2.65e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.99e-37,72;CL:0000738,1.40e-34,136;CL:0000037,7.76e-34,168;CL:0002194,4.01e-31,59;CL:0000576,4.01e-31,59;CL:0000040,4.01e-31,59;CL:0000559,4.01e-31,59;CL:0000988,6.37e-31,177;CL:0000557,6.72e-31,67;CL:0002009,6.42e-30,61;CL:0002032,1.13e-29,161;CL:0000837,1.13e-29,161;CL:0000473,1.24e-29,48;CL:0000234,1.24e-29,48;CL:0002087,2.65e-29,115;CL:0000839,3.10e-29,66;CL:0000763,5.23e-29,108;CL:0000049,5.23e-29,108;CL:0000860,4.50e-28,42;CL:0002057,4.50e-28,42;CL:0002031,4.57e-26,120;CL:0002393,1.32e-07,9;CL:0002397,1.32e-07,9;CL:0000094,2.73e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.14e-20;42!CL:0000049;3.79e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.19e-27!115;UBERON:0002390!1.11e-26!102;UBERON:0003061!1.11e-26!102;UBERON:0002193!6.86e-24!112;UBERON:0001474!1.26e-20!86;UBERON:0002371!1.58e-20!80;UBERON:0001049!6.43e-20!57;UBERON:0005068!6.43e-20!57;UBERON:0006241!6.43e-20!57;UBERON:0007135!6.43e-20!57;UBERON:0002405!4.23e-19!115;UBERON:0005743!1.51e-18!86;UBERON:0001017!1.98e-18!82;UBERON:0000073!2.37e-18!94;UBERON:0001016!2.37e-18!94;UBERON:0003080!8.52e-17!42;UBERON:0002780!1.66e-16!41;UBERON:0001890!1.66e-16!41;UBERON:0006240!1.66e-16!41;UBERON:0000955!1.73e-16!69;UBERON:0006238!1.73e-16!69;UBERON:0002616!4.80e-16!59;UBERON:0004765!1.57e-15!101;UBERON:0001434!1.57e-15!101;UBERON:0002346!5.21e-15!90;UBERON:0001893!2.27e-14!34;UBERON:0003075!2.80e-14!86;UBERON:0007284!2.80e-14!86;UBERON:0002020!3.15e-14!34;UBERON:0003528!3.15e-14!34;UBERON:0001869!6.92e-14!32;UBERON:0002791!6.92e-14!33;UBERON:0003056!9.55e-12!61;UBERON:0000956!2.90e-11!25;UBERON:0000203!2.90e-11!25;UBERON:0002619!1.50e-10!22;UBERON:0001950!1.23e-09!20;UBERON:0000153!2.77e-07!129;UBERON:0007811!2.77e-07!129;UBERON:0000033!7.83e-07!123;UBERON:0000178!8.69e-07!15;UBERON:0000179!8.69e-07!15;UBERON:0000463!8.69e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.98e-14;32!UBERON:0001893;1.54e-13;34!UBERON:0002791;1.74e-13;32!UBERON:0003528;2.07e-13;34!UBERON:0002020;2.07e-13;34!UBERON:0002780;3.93e-13;41!UBERON:0001890;3.93e-13;41!UBERON:0000956;3.39e-12;25!UBERON:0000203;3.39e-12;25!UBERON:0000073;2.12e-11;53!UBERON:0002616;2.12e-11;53!UBERON:0002619;2.14e-11;22!UBERON:0001950;2.11e-10;20!UBERON:0000955;6.89e-08;68!UBERON:0001017;6.95e-08;75!UBERON:0007023;7.77e-08;114!UBERON:0001016;8.85e-08;83!UBERON:0000178;2.79e-07;15!UBERON:0000179;2.79e-07;15!UBERON:0000463;2.79e-07;15 | |||
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| ||
|short_description=p1@TMEM170B | |||
}} | }} |
Latest revision as of 00:16, 20 September 2015
Short description: | p1@TMEM170B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM170B_5end |
Coexpression cluster: | C4548_CD14_Neutrophils_Basophils_granulocyte_Dendritic_Eosinophils_blood |
Association with transcript: | -480bp_to_ENST00000379426, NM_001100829, uc010jpa.2_5end |
EntrezGene: | TMEM170B |
HGNC: | 34244 |
UniProt: | Q5T4T1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.99e-37 | 72 |
leukocyte | 1.40e-34 | 136 |
hematopoietic stem cell | 7.76e-34 | 168 |
monopoietic cell | 4.01e-31 | 59 |
monocyte | 4.01e-31 | 59 |
monoblast | 4.01e-31 | 59 |
promonocyte | 4.01e-31 | 59 |
hematopoietic cell | 6.37e-31 | 177 |
granulocyte monocyte progenitor cell | 6.72e-31 | 67 |
macrophage dendritic cell progenitor | 6.42e-30 | 61 |
hematopoietic oligopotent progenitor cell | 1.13e-29 | 161 |
hematopoietic multipotent progenitor cell | 1.13e-29 | 161 |
defensive cell | 1.24e-29 | 48 |
phagocyte | 1.24e-29 | 48 |
nongranular leukocyte | 2.65e-29 | 115 |
myeloid lineage restricted progenitor cell | 3.10e-29 | 66 |
myeloid cell | 5.23e-29 | 108 |
common myeloid progenitor | 5.23e-29 | 108 |
classical monocyte | 4.50e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.50e-28 | 42 |
hematopoietic lineage restricted progenitor cell | 4.57e-26 | 120 |
intermediate monocyte | 1.32e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.32e-07 | 9 |
granulocyte | 2.73e-07 | 8 |