FFCP PHASE1:Hg19::chr6:152793504..152793531,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:152793504..152793531,-
|short_description=p18@SYNE1
|description=CAGE_peak_18_at_SYNE1_5end
|association_with_transcript=122bp_to_ENST00000468937_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23345 | |EntrezGene=23345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17089 | |HGNC=17089 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=122bp_to_ENST00000468937_5end | |||
|cluster_id=chr6:152793504..152793531,- | |||
|description=CAGE_peak_18_at_SYNE1_5end | |||
|id=chr6:152793504..152793531,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.50e-07;1!DOID:4549;1.50e-07;1!DOID:5861;1.50e-07;1!DOID:6496;1.50e-07;1!DOID:2513;1.75e-07;1!DOID:4235;5.77e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.46e-07,1;DOID:4549,1.46e-07,1;DOID:5861,1.46e-07,1;DOID:6496,1.46e-07,1;DOID:2513,1.75e-07,1;DOID:4235,4.06e-07,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;1.51e-46;32!UBERON:0002619;2.27e-45;22!UBERON:0002791;6.95e-41;32!UBERON:0000956;8.29e-40;25!UBERON:0000203;8.29e-40;25!UBERON:0001893;1.13e-39;34!UBERON:0003528;1.31e-37;34!UBERON:0002020;1.31e-37;34!UBERON:0001950;2.54e-36;20!UBERON:0000200;2.93e-33;6!UBERON:0002780;2.49e-28;41!UBERON:0001890;2.49e-28;41!UBERON:0000349;1.27e-18;5!UBERON:0001870;1.59e-17;3!UBERON:0000073;6.46e-17;53!UBERON:0002616;6.46e-17;53!UBERON:0000369;6.50e-14;4!UBERON:0002435;6.50e-14;4!UBERON:0000204;6.50e-14;4!UBERON:0001017;2.44e-13;75!UBERON:0000955;4.14e-13;68!UBERON:0001954;1.01e-12;2!UBERON:0003022;1.01e-12;2!UBERON:0002421;1.01e-12;2!UBERON:0002600;1.01e-12;2!UBERON:0002771;2.87e-12;2!UBERON:0002702;2.87e-12;2!UBERON:0002021;6.02e-11;5!UBERON:0002420;1.39e-10;9!UBERON:0007245;1.39e-10;9!UBERON:0010009;1.39e-10;9!UBERON:0010011;1.39e-10;9!UBERON:0000454;1.39e-10;9!UBERON:0005383;4.95e-09;3!UBERON:0005382;4.95e-09;3!UBERON:0001016;2.65e-08;83!UBERON:0009663;3.77e-08;7!UBERON:0001871;8.44e-08;6!UBERON:0001874;2.44e-07;1!UBERON:0002581;5.77e-07;1!UBERON:0001882;5.77e-07;1!UBERON:0002022;5.77e-07;1!UBERON:0007190;5.77e-07;1!UBERON:0005403;5.77e-07;1 | |||
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| ||
|short_description=p18@SYNE1 | |||
}} | }} |
Latest revision as of 06:50, 16 September 2015
Short description: | p18@SYNE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_SYNE1_5end |
Coexpression cluster: | NA |
Association with transcript: | 122bp_to_ENST00000468937_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.46e-07 | 1 |
extraosseous chondrosarcoma | 1.46e-07 | 1 |
myxoid chondrosarcoma | 1.46e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 1.46e-07 | 1 |
basal cell carcinoma | 1.75e-07 | 1 |
spindle cell sarcoma | 4.06e-07 | 1 |