FFCP PHASE1:Hg19::chr6:91006518..91006570,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:91006518..91006570,-
|short_description=p1@BACH2
|description=CAGE_peak_1_at_BACH2_5end
|association_with_transcript=0bp_to_NM_021813,uc003pnw.2,uc010kch.2...") |
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(13 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=60468 | |EntrezGene=60468 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14078 | |HGNC=14078 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BYV9 | |UniProt=Q9BYV9 | ||
|association_with_transcript=0bp_to_NM_021813,uc003pnw.2,uc010kch.2,uc011eab.1_5end | |||
|cluster_id=chr6:91006518..91006570,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_1_at_BACH2_5end | |||
|id=chr6:91006518..91006570,- | |||
|ontology_enrichment_celltype=CL:0000542!3.09e-13!53;CL:0000051!3.09e-13!53;CL:0000838!6.80e-13!52;CL:0000738!4.09e-11!140;CL:0000791!1.19e-09!18;CL:0000789!1.19e-09!18;CL:0002420!1.19e-09!18;CL:0002419!1.19e-09!18;CL:0000790!1.19e-09!18;CL:0002087!1.31e-09!119;CL:0000236!1.87e-09!14;CL:0000084!1.41e-07!25;CL:0000827!1.41e-07!25;CL:0002031!1.65e-07!124;CL:0000625!2.30e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000236;4.31e-11;13!CL:0000791;9.60e-11;18!CL:0000789;9.60e-11;18!CL:0002419;9.60e-11;18!CL:0000542;1.10e-10;53!CL:0000084;9.53e-09;25!CL:0000625;6.14e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.75e-15,53;CL:0000051,1.75e-15,53;CL:0000838,4.21e-15,52;CL:0000738,3.13e-13,136;CL:0002087,3.67e-12,115;CL:0000791,1.02e-10,18;CL:0000789,1.02e-10,18;CL:0002420,1.02e-10,18;CL:0002419,1.02e-10,18;CL:0000790,1.02e-10,18;CL:0000236,1.08e-09,14;CL:0002031,1.35e-09,120;CL:0000084,1.01e-08,25;CL:0000827,1.01e-08,25;CL:0000625,6.36e-08,11;CL:0000037,2.44e-07,168;CL:0000988,4.02e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;9.60e-11;18!CL:0000051;1.10e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.61e-26!115;UBERON:0001017!2.64e-17!82;UBERON:0001049!4.44e-17!57;UBERON:0005068!4.44e-17!57;UBERON:0006241!4.44e-17!57;UBERON:0007135!4.44e-17!57;UBERON:0005743!1.45e-16!86;UBERON:0000073!6.76e-15!94;UBERON:0001016!6.76e-15!94;UBERON:0002616!1.09e-14!59;UBERON:0000955!3.87e-14!69;UBERON:0006238!3.87e-14!69;UBERON:0003080!9.92e-13!42;UBERON:0002780!1.53e-12!41;UBERON:0001890!1.53e-12!41;UBERON:0006240!1.53e-12!41;UBERON:0003075!9.57e-12!86;UBERON:0007284!9.57e-12!86;UBERON:0002020!3.82e-11!34;UBERON:0003528!3.82e-11!34;UBERON:0001893!5.58e-11!34;UBERON:0002346!5.81e-11!90;UBERON:0002791!8.87e-11!33;UBERON:0000153!2.58e-10!129;UBERON:0007811!2.58e-10!129;UBERON:0001869!3.35e-10!32;UBERON:0000178!1.55e-09!15;UBERON:0000179!1.55e-09!15;UBERON:0000463!1.55e-09!15;UBERON:0004121!1.91e-09!169;UBERON:0000033!3.05e-09!123;UBERON:0000924!4.80e-09!173;UBERON:0006601!4.80e-09!173;UBERON:0003056!8.13e-09!61;UBERON:0000956!4.74e-08!25;UBERON:0000203!4.74e-08!25;UBERON:0002619!6.57e-08!22;UBERON:0001950!2.15e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.50e-10;15!UBERON:0000179;2.50e-10;15!UBERON:0000463;2.50e-10;15!UBERON:0002780;4.61e-10;41!UBERON:0001890;4.61e-10;41!UBERON:0003528;6.20e-10;34!UBERON:0002020;6.20e-10;34!UBERON:0002791;6.98e-10;32!UBERON:0000073;9.06e-10;53!UBERON:0002616;9.06e-10;53!UBERON:0001893;9.49e-10;34!UBERON:0001869;1.09e-09;32!UBERON:0000956;3.10e-08;25!UBERON:0000203;3.10e-08;25!UBERON:0002619;3.86e-08;22!UBERON:0002390;9.55e-08;32!UBERON:0001950;1.36e-07;20!UBERON:0007023;2.13e-07;114!UBERON:0001016;9.35e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.51e-26,114;UBERON:0001049,6.42e-18,56;UBERON:0005068,6.42e-18,56;UBERON:0006241,6.42e-18,56;UBERON:0007135,6.42e-18,56;UBERON:0001017,1.98e-17,81;UBERON:0000073,7.98e-17,53;UBERON:0002616,7.98e-17,53;UBERON:0001016,4.75e-16,89;UBERON:0000955,5.18e-14,68;UBERON:0006238,5.18e-14,68;UBERON:0002780,3.60e-13,41;UBERON:0001890,3.60e-13,41;UBERON:0003080,3.60e-13,41;UBERON:0006240,3.60e-13,41;UBERON:0003075,1.04e-12,82;UBERON:0007284,1.04e-12,82;UBERON:0002346,6.51e-12,86;UBERON:0003528,1.24e-11,34;UBERON:0002020,1.24e-11,34;UBERON:0001893,1.87e-11,34;UBERON:0002791,8.40e-11,32;UBERON:0001869,1.31e-10,32;UBERON:0000178,2.68e-10,15;UBERON:0000179,2.68e-10,15;UBERON:0000463,2.68e-10,15;UBERON:0010371,1.85e-09,104;UBERON:0003056,5.85e-09,61;UBERON:0011216,1.52e-08,223;UBERON:0000956,2.90e-08,25;UBERON:0000203,2.90e-08,25;UBERON:0002619,4.34e-08,22;UBERON:0001950,1.59e-07,20;UBERON:0004121,2.09e-07,171;UBERON:0000924,2.09e-07,171;UBERON:0006601,2.09e-07,171 | |||
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| ||
|short_description=p1@BACH2 | |||
}} | }} |
Latest revision as of 04:19, 20 September 2015
Short description: | p1@BACH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BACH2_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_NM_021813, uc003pnw.2, uc010kch.2, uc011eab.1_5end |
EntrezGene: | BACH2 |
HGNC: | 14078 |
UniProt: | Q9BYV9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.75e-15 | 53 |
common lymphoid progenitor | 1.75e-15 | 53 |
lymphoid lineage restricted progenitor cell | 4.21e-15 | 52 |
leukocyte | 3.13e-13 | 136 |
nongranular leukocyte | 3.67e-12 | 115 |
mature alpha-beta T cell | 1.02e-10 | 18 |
alpha-beta T cell | 1.02e-10 | 18 |
immature T cell | 1.02e-10 | 18 |
mature T cell | 1.02e-10 | 18 |
immature alpha-beta T cell | 1.02e-10 | 18 |
B cell | 1.08e-09 | 14 |
hematopoietic lineage restricted progenitor cell | 1.35e-09 | 120 |
T cell | 1.01e-08 | 25 |
pro-T cell | 1.01e-08 | 25 |
CD8-positive, alpha-beta T cell | 6.36e-08 | 11 |
hematopoietic stem cell | 2.44e-07 | 168 |
hematopoietic cell | 4.02e-07 | 177 |