FFCP PHASE1:Hg19::chr16:90085961..90085989,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79007 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28455 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H9R9 | |||
|association_with_transcript=-24bp_to_NM_001042610,uc002fqf.1_5end | |||
|cluster_id=chr16:90085961..90085989,- | |||
|description=CAGE_peak_3_at_DBNDD1_5end | |||
|id=chr16:90085961..90085989,- | |||
|ontology_enrichment_celltype=CL:0000066!1.22e-17!254;CL:0002321!7.40e-14!248;CL:0000220!2.69e-13!246;CL:0002139!7.95e-11!24;CL:0000115!1.27e-10!35;CL:0002078!1.11e-09!44;CL:0000071!2.49e-09!18;CL:0002546!2.49e-09!18;CL:1000449!3.48e-08!16;CL:0000213!1.77e-07!57;CL:0000215!1.77e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:1000449;9.94e-13;15!CL:1000507;8.41e-12;10!CL:1000494;8.41e-12;10!CL:1000497;9.95e-11;17!CL:0002518;9.95e-11;17!CL:0000071;4.06e-10;18!CL:0002139;4.68e-10;24!CL:0002681;1.83e-09;12!CL:0002584;1.83e-09;12!CL:0000115;2.75e-08;36!CL:0002078;1.15e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,1.59e-12,15;CL:1000507,1.28e-11,10;CL:1000494,1.28e-11,10;CL:0002078,6.48e-11,45;CL:1000497,1.48e-10,17;CL:0002518,1.48e-10,17;CL:0000115,1.67e-10,36;CL:0000071,3.32e-10,18;CL:0002546,3.32e-10,18;CL:0002139,3.52e-10,24;CL:0002681,2.55e-09,12;CL:0002584,2.55e-09,12;CL:0000066,9.28e-09,253;CL:0002321,4.48e-08,250 | |||
|ontology_enrichment_development_v019=CL:0002546;4.06e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!2.66e-27!194;UBERON:0004111!5.74e-25!241;UBERON:0005743!1.06e-22!86;UBERON:0000073!1.74e-22!94;UBERON:0001016!1.74e-22!94;UBERON:0001017!1.42e-21!82;UBERON:0001049!2.48e-19!57;UBERON:0005068!2.48e-19!57;UBERON:0006241!2.48e-19!57;UBERON:0007135!2.48e-19!57;UBERON:0000477!8.12e-19!286;UBERON:0000483!9.95e-19!309;UBERON:0002020!1.25e-18!34;UBERON:0003528!1.25e-18!34;UBERON:0002346!1.59e-18!90;UBERON:0001893!1.65e-18!34;UBERON:0003075!2.05e-18!86;UBERON:0007284!2.05e-18!86;UBERON:0001869!2.28e-18!32;UBERON:0000119!2.49e-18!312;UBERON:0002791!8.47e-18!33;UBERON:0000955!4.97e-17!69;UBERON:0006238!4.97e-17!69;UBERON:0002780!1.08e-16!41;UBERON:0001890!1.08e-16!41;UBERON:0006240!1.08e-16!41;UBERON:0003056!4.44e-16!61;UBERON:0003080!8.12e-16!42;UBERON:0002616!9.33e-16!59;UBERON:0000956!5.93e-15!25;UBERON:0000203!5.93e-15!25;UBERON:0002619!4.22e-14!22;UBERON:0000033!4.63e-14!123;UBERON:0000924!1.05e-13!173;UBERON:0006601!1.05e-13!173;UBERON:0004121!2.04e-13!169;UBERON:0001950!6.27e-13!20;UBERON:0000153!1.25e-12!129;UBERON:0007811!1.25e-12!129;UBERON:0000481!2.42e-12!347;UBERON:0000475!1.21e-11!365;UBERON:0003914!5.70e-11!118;UBERON:0001986!2.49e-09!18;UBERON:0004638!2.49e-09!18;UBERON:0004852!2.49e-09!18;UBERON:0007023!5.59e-09!115;UBERON:0000055!6.39e-09!69;UBERON:0000487!6.77e-09!22;UBERON:0002049!1.41e-08!79;UBERON:0007798!1.41e-08!79;UBERON:0001981!2.26e-08!60;UBERON:0007500!2.26e-08!60;UBERON:0004537!2.26e-08!60;UBERON:0006965!2.26e-08!60;UBERON:0004211!3.48e-08!16;UBERON:0001285!3.48e-08!16;UBERON:0007684!3.48e-08!16;UBERON:0003220!3.48e-08!16;UBERON:0004208!3.48e-08!16;UBERON:0006555!4.74e-08!17;UBERON:0005103!4.74e-08!17;UBERON:0000083!4.74e-08!17;UBERON:0009201!4.74e-08!17;UBERON:0004819!4.74e-08!17;UBERON:0006553!4.74e-08!17;UBERON:0003074!4.74e-08!17;UBERON:0003060!4.74e-08!17;UBERON:0000064!6.24e-08!219;UBERON:0000922!1.28e-07!612;UBERON:0000468!3.20e-07!659;UBERON:0000080!3.65e-07!18;UBERON:0002120!3.65e-07!18;UBERON:0004875!3.65e-07!18;UBERON:0005721!3.65e-07!18;UBERON:0005754!3.65e-07!18;UBERON:0007297!3.65e-07!18;UBERON:0005177!9.09e-07!107;UBERON:0000353!9.81e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.72e-24;32!UBERON:0002791;7.08e-23;32!UBERON:0003528;1.00e-22;34!UBERON:0002020;1.00e-22;34!UBERON:0000956;1.20e-22;25!UBERON:0000203;1.20e-22;25!UBERON:0002619;2.42e-22;22!UBERON:0001893;5.38e-22;34!UBERON:0001950;2.60e-20;20!UBERON:0002780;1.88e-17;41!UBERON:0001890;1.88e-17;41!UBERON:0000073;8.06e-15;53!UBERON:0002616;8.06e-15;53!UBERON:0006555;9.94e-13;15!UBERON:0004819;9.94e-13;15!UBERON:0001285;9.94e-13;15!UBERON:0007684;9.94e-13;15!UBERON:0004211;8.41e-12;10!UBERON:0009773;8.41e-12;10!UBERON:0001231;8.41e-12;10!UBERON:0004810;8.41e-12;10!UBERON:0000955;7.62e-11;68!UBERON:0001017;1.27e-10;75!UBERON:0000353;3.42e-10;15!UBERON:0004638;4.06e-10;18!UBERON:0001986;4.06e-10;18!UBERON:0004852;4.06e-10;18!UBERON:0001225;1.83e-09;12!UBERON:0008987;1.83e-09;12!UBERON:0000487;7.10e-09;22!UBERON:0001016;7.79e-09;83!UBERON:0001851;2.59e-08;15!UBERON:0003914;5.35e-08;74!UBERON:0000200;5.67e-08;6!UBERON:0002113;1.94e-07;24!UBERON:0011143;1.94e-07;24!UBERON:0000489;2.44e-07;29!UBERON:0000349;2.66e-07;5!UBERON:0006914;2.67e-07;25!UBERON:0001871;2.87e-07;6!UBERON:0002021;3.41e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,2.04e-29,192;UBERON:0001869,1.64e-27,32;UBERON:0001017,3.17e-27,81;UBERON:0003528,7.15e-27,34;UBERON:0002020,7.15e-27,34;UBERON:0001049,4.45e-26,56;UBERON:0005068,4.45e-26,56;UBERON:0006241,4.45e-26,56;UBERON:0007135,4.45e-26,56;UBERON:0001893,2.72e-25,34;UBERON:0002791,3.63e-25,32;UBERON:0000073,3.64e-25,53;UBERON:0002616,3.64e-25,53;UBERON:0004111,5.89e-24,240;UBERON:0001016,8.53e-24,89;UBERON:0002780,1.15e-23,41;UBERON:0001890,1.15e-23,41;UBERON:0003080,1.15e-23,41;UBERON:0006240,1.15e-23,41;UBERON:0000956,8.45e-23,25;UBERON:0000203,8.45e-23,25;UBERON:0002619,1.62e-22,22;UBERON:0003075,1.20e-21,82;UBERON:0007284,1.20e-21,82;UBERON:0003056,1.78e-21,61;UBERON:0000955,2.10e-21,68;UBERON:0006238,2.10e-21,68;UBERON:0002346,9.16e-21,86;UBERON:0001950,1.76e-20,20;UBERON:0000483,1.07e-18,306;UBERON:0000119,3.33e-18,309;UBERON:0010371,9.13e-18,104;UBERON:0010314,2.87e-14,132;UBERON:0004211,1.59e-12,15;UBERON:0009773,1.59e-12,15;UBERON:0001231,1.59e-12,15;UBERON:0001285,1.59e-12,15;UBERON:0007684,1.59e-12,15;UBERON:0004208,1.59e-12,15;UBERON:0004121,1.70e-12,171;UBERON:0000924,1.70e-12,171;UBERON:0006601,1.70e-12,171;UBERON:0004810,1.28e-11,10;UBERON:0006555,1.78e-11,16;UBERON:0004819,1.78e-11,16;UBERON:0011216,2.31e-11,223;UBERON:0003914,1.43e-10,117;UBERON:0004638,3.32e-10,18;UBERON:0001986,3.32e-10,18;UBERON:0004852,3.32e-10,18;UBERON:0000353,4.55e-10,15;UBERON:0001225,2.55e-09,12;UBERON:0008987,2.55e-09,12;UBERON:0000487,6.45e-09,22;UBERON:0000922,9.39e-09,592;UBERON:0007023,1.51e-08,114;UBERON:0001851,3.50e-08,15;UBERON:0000200,3.77e-08,6;UBERON:0006914,2.46e-07,25;UBERON:0000349,2.65e-07,5;UBERON:0001871,2.76e-07,6;UBERON:0002049,3.05e-07,78;UBERON:0007798,3.05e-07,78;UBERON:0002021,3.17e-07,5;UBERON:0007500,3.39e-07,59;UBERON:0001981,3.39e-07,59;UBERON:0004537,3.39e-07,59;UBERON:0006965,3.39e-07,59;UBERON:0005423,3.70e-07,581;UBERON:0000055,3.83e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.21160542851358,11.1648186875588,0,0,0.37129905888014,0,1.34465029290355,0,0.730310090387373,1.46379839637152,0.61560529038394,0.204000691244253,0.626909442956176,0.572471974262113,2.18999080116615,1.50651167513763,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0.954053754535364,0,0.587237189370939,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.434539556882471,0.795285947051099,0.486634870302636,1.03988298880475,1.10864698731282,1.49319135678314,2.16115474571226,1.82147644146271,0.370784442784429,0,0.522389211897802,0.26591592103773,0,0,0,3.7764857399674,1.72046919021225,2.08284300964557,0.56530794192401,10.4874859052476,4.12677062910101,0.835979866147242,0.516833518338658,0.71153252537342,0.66944122552934,2.81980521976403,1.52054421143703,4.14905497831888,0.735326160691737,0.81014194788176,1.07159673940896,2.02076435363553,1.91439516821648,1.53316637465883,9.49265659568129,2.38162267109529,0,0,1.74437620857014,0,0.25326102332916,0.132409180813219,0,0.354668382198357,1.12135520028461,0,1.97334038733728,0,0.404132016209064,0.163461903113459,0.302714855289863,0,0.468642863667593,0,0,0,0.117434498643765,0,0,0,0.491337269247072,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0.194874010322397,0.252433774244115,0.184099797284599,0,0,0.201504196455281,0,0.386521706326594,0.818238361772504,0.286804595389004,1.82960559194393,1.19276791489337,2.44007280025989,0.932949495138334,0.756962552626885,0.36497735907583,0,1.28648187638577,0,0,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0.392442930250692,0.38474715694639,1.4763109092493,4.20725321410337,0.8231480226628,0,1.26755034821831,0,0,0,0.860919069801795,1.02940686179115,1.64625428112938,0,0.201057944823262,0.0925884451585296,0,1.03993478527958,0,1.04337364477569,0.234817388471643,2.59859605969933,1.38895653772983,1.52203321787679,0,3.43394464837949,0,0,0,1.87467667973554,0.503946384596579,0.283550194484773,0,0,1.91691339582606,0,0.088048434013226,0,0,0.12624243342638,1.39695367442772,4.96584953225761,3.51652341630141,3.4214489204541,1.85089486865982,0.300343057843917,1.71495859578347,0.112131084345361,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.99972991182057,0,0,0,1.91699884393266,1.14861935834114,0,0,0.205476322550383,0.179060963239896,0,0,0,0,1.52456774533478,1.30139853857622,3.09315525111078,3.35032530668698,1.27587750330633,0,0,0,0,0.500170521059677,0.813795071099207,0.207970861530807,0,0,0.702848489956279,0.300946099727719,0,0,0,0.553107505625109,0.0868836144680828,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0.177561725313127,0.657017248110473,0,0.348631135379878,1.0877350463246,1.00253235151642,1.47329582297434,0,0,0,2.70719767744447,2.54150612444569,6.27479815341484,7.30696123266303,2.32213583564327,5.68666920354483,0.510281115829547,0.647747748306418,3.08454505380579,2.16757150035082,3.51182841698397,4.84264918785573,4.98645605357235,1.11937377361089,0,0,2.56450125116389,0.984043937099117,0.976135183992909,0.103041011647722,0,0.082509499920588,1.14853107599234,0.650060246036521,0,0.386682873168488,0,0.307007349452259,0,0,0.145016693914229,0,0.0890320356467374,0.330569830721956,0.192190067365106,0,0.50578890427775,0.464845549297286,0,0,0.308033580176089,1.06461206063404,0,1.48259375283136,1.14499909393593,0,0,0.190630193923825,0.511795582622668,0,0.636406495851874,0.78494864019923,0.179872457583315,0,0,2.62837226045311,4.75530963519025,1.26377536871694,0,0.243713489631284,0,0,0,0,0.551365343546124,2.65375590096488,0.876901770507525,0,0,1.42037263873893,1.239293992399,0.845086807596724,0,0.196498082026242,1.78335525740625,0,0,0,0,0.699869440489966,0.0962221127255121,3.35151137767894,1.08890984861323,0.188287601553558,0,0,0.443430153536676,0.229723400206959,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0.747768497892312,0,1.96032172784825,0,0,0,0.159426272728822,0.199579371432817,0,0,0,0,0,0,0,0.338583555603207,0,0,0.425846237690326,0,0,0.671028323677248,0.166849141711909,0,0,0,0,0,0,1.68426486367398,0.146508179271894,0.606802608747567,0,0.852408440419239,0.23874448473769,0,0.307160702099232,7.95318118213038,5.90811548924153,0.445234820091624,0,0.211125408127993,0.19924798825107,0,1.0077309914171,0.511343412510774,0.615424027305347,0,0.0898683511473268,0,0,0.197286811273867,0,0,14.5399911914283,3.52518773015035,13.9729658600836,1.5625665665114,1.22443999994674,0,0.455173793141999,0.254253650292766,2.6002644994473,1.03423011972439,0,0.347249989866585,1.77148277162768,3.37670028151142,0,1.54810963903714,1.18219047581419,6.3621765174652,0.21787692703798,0,0.230850775511391,0,2.07507513949254,1.16684937732704,2.82483166997221,0,0.0915975934018623,0,0,0.31396051279005,0,0.225595660617181,0.784250137270958,0.167821586975843,0.189753732724185,0,1.89898258075224,0.489698424477443,0.989471500037586,1.73110911793673,0,0.353830258013357,0,0,0.123563938946503,0,0.808813595768125,0,3.27970224015475,0,0.391329237864179,1.69946265673865,0,0,7.65181904076225,0.189559738885464,0,0.207376382794494,0.664653872707185,1.323967823502,0.941798755221676,3.58417289318877,0,3.18951747930219,2.2562765983567,0.391969589657511,1.82824333818845,0.34945333648406,1.89184635718778,0.19351266257817,0.0730893170861856,0.328461828212837,1.64881328030313,0,2.93774963014692,0.548167698587004,0,5.6346608400732,0.391102765469606,0.721429382263803,0.640358984218058,0,1.00863292007874,1.94712213482057,0.857974989309823,1.00838358591705,0.248505071130865,0.471388069233591,0.67952103036807,1.255234155748,0.101998217636322,0,0.600420288709789,1.36905378891993,0,0,0,0,0.229160424011684,0,0.599037001496973,1.28767814440971,0.89268582976749,0.201550417460179,1.08089965062721,2.32991899054908,2.20592910460226,1.15382201733633,1.07845670166696,0.393709926058995,0,2.38568906942791,3.67749196501254,1.28602518772015,0.275078873194468,2.49264202817511,0.2249738915515,1.5476039091159,5.89270699582839,0,0.945668487590378,0.629455057619977,0.528001682597033,0.537862017998534,0,1.42939065274673,0,1.017074150619,0,1.72844298240254,0.326587360109409,0,0.082092520749339,0.170388021785422,0.566560457600628,0.146552233678082,0,1.55139547633861,2.6446520348538,1.19760786519031,0,0.320362237703084,0.157204305099666,0,0,0.197611631897944,0,0,0.544017803369474,1.5041393641362,0.612691153526923,0,0.628216385000937,1.77213635993397,2.56255156294123,6.25954653532499,0.573409195690071,1.44207766997908,2.42175971471395,0.415045904808692,0.124980407962107,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0.757612021100357,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0.265841714557995,0.521745061811734,0.751288044986092,1.90402606084398,0,0.181848659202559,1.07410557042488,0,0.398095888698616,0,0,0,1.26184898228651,1.34833881285112,0.214441591374926,0,0.226705925512272,0.694567422971502,0.244736704506468,1.79088841081487,0,0.877136198314828,0.353378291891762,0.771656153083659,0,0.76872455576384,0.345430341731199,0,4.83904526531058,0,0.797189041880179,0.327130788511688,0,0.245772908753719,0.211312123358627,0,0.426766918776564,0,1.13503190713367,0,0.699397538597222,0,0.76736622782191,0.754773679776773,0.629063767423586,0.982886743728125,1.01839517972415,0.637724760305049,0.123935764259002,0.558644917973244,0,0,0,0.352675943690684,0,5.20256723281322,2.8339315265117,2.39450788585727,8.2046545696302,4.53729053199093,8.43718480063458,3.87541549516443,1.42769420259154,0,0.825788063434183,0,0.577628330751691,0,0,0.795664888465099,0.0752103283492573,0,1.56302802246618,1.83334686136996,0.327543835020193,0.295712172434091,6.41607053874749,0.781078098613847,3.30698874401895,7.80014465385054,4.92277328116398,1.09651553371436,0,0.175871244359621,0.511049710558381,0,0,1.21393120847326,0.455324382702595,0,0,0,3.26254718288792,6.05109516778212,3.42762138563508,0.222462803784138,0.078493092850514,2.98519620840404,0.280272163313789,0,0,0,0.428859265059938,0.316027223465453,0.929931402945002,0,1.60342272946051,0,0,0.691259661814092,1.72090943528111,0,0.0852134047591577,0,0,0.62041277132864,0,0.223710863595585,0.098150233615243,0.243835849964539,0.647428837187895,0.307988420568741,0,0,3.27515248846948,0.198950775161368,2.97300226943921,0.45178432815584,0.549702583727146,0.301925687133347,0.0771741581079447,0.437119121007915,0.470317296361523,0,0.942706188406504,1.76677620403451,0.594092800654172,2.5359343655004,0.169927114687817,0,0.0644578879735772,0.0999411559249289,0.71421575442263,0,0,0,0.917458566809082,0.573358332605805,0,8.22697031310068,4.36350690340377,0.5290268405154,0.371995018166751,0.462175628631418,0,2.3971620718665,0.764859003745869,0.633492505057185,2.65170957329153,2.40495664739004,0.827054095813604,0.50141507858475,0.303114792872958,0,0,1.13776295448085,0.426467963801962,0.23806443146374,0,0,0.224263725161227,0.12729431655633,0,0.653150243690884,0,0.80822463617505,0.502055437748735,0,0.244209805832924,0.320182037633146,0,0.718601616852695,0,0.122241444182866,1.22068853494722,0,0,0 | |||
|short_description=p3@DBNDD1 | |||
}} |
Latest revision as of 13:11, 18 September 2015
Short description: | p3@DBNDD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DBNDD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_NM_001042610, uc002fqf.1_5end |
EntrezGene: | DBNDD1 |
HGNC: | 28455 |
UniProt: | Q9H9R9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 1.59e-12 | 15 |
kidney tubule cell | 1.28e-11 | 10 |
nephron tubule epithelial cell | 1.28e-11 | 10 |
meso-epithelial cell | 6.48e-11 | 45 |
kidney cell | 1.48e-10 | 17 |
kidney epithelial cell | 1.48e-10 | 17 |
endothelial cell | 1.67e-10 | 36 |
blood vessel endothelial cell | 3.32e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.32e-10 | 18 |
endothelial cell of vascular tree | 3.52e-10 | 24 |
kidney cortical cell | 2.55e-09 | 12 |
renal cortical epithelial cell | 2.55e-09 | 12 |
epithelial cell | 9.28e-09 | 253 |
embryonic cell | 4.48e-08 | 250 |