FFCP PHASE1:Mm9::chr10:94013564..94013578,+: Difference between revisions
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{{FFCP|EntrezGene=319880|HGNC=|MCL_coexpression_id=20|UniProt=F6R793|association_with_transcript=-18bp_to_ENSMUST00000148910_5end|description=CAGE_peak_15_at_Tmcc3_5end|id=chr10:94013564..94013578,+|ontology_enrichment_celltype=CL:0002610!5.65e-07!3;CL:0002614!7.04e-07!3|ontology_enrichment_celltype_v019_2=CL:0002610,3.20e-13,3;CL:0002614,5.12e-13,3;CL:0000117,4.85e-08,23;CL:0000337,4.85e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!4.82e-25!63;UBERON:0001017!1.27e-22!73;UBERON:0005743!1.27e-22!73;UBERON:0002346!1.45e-22!71;UBERON:0003075!1.45e-22!71;UBERON:0007284!1.45e-22!71;UBERON:0004121!7.04e-22!102;UBERON:0000924!7.04e-22!102;UBERON:0006601!7.04e-22!102;UBERON:0000073!8.90e-22!75;UBERON:0001016!8.90e-22!75;UBERON:0001049!1.13e-20!52;UBERON:0005068!1.13e-20!52;UBERON:0006241!1.13e-20!52;UBERON:0007135!1.13e-20!52;UBERON:0000955!2.74e-20!50;UBERON:0006238!2.74e-20!50;UBERON:0002616!5.61e-19!49;UBERON:0007811!5.34e-16!86;UBERON:0003056!8.25e-16!49;UBERON:0003076!2.39e-14!12;UBERON:0003057!2.39e-14!12;UBERON:0000153!6.67e-14!94;UBERON:0002020!9.95e-14!34;UBERON:0002298!1.90e-12!6;UBERON:0002021!1.32e-10!10;UBERON:0000411!1.32e-10!10;UBERON:0001950!1.32e-10!10;UBERON:0003080!6.36e-10!40;UBERON:0002791!9.62e-10!29;UBERON:0003528!9.62e-10!29;UBERON:0001893!9.62e-10!29;UBERON:0002780!7.26e-09!39;UBERON:0001890!7.26e-09!39;UBERON:0006240!7.26e-09!39;UBERON:0002950!1.14e-08!4;UBERON:0001891!1.14e-08!4;UBERON:0009616!1.14e-08!4;UBERON:0004733!4.91e-08!6;UBERON:0004732!4.91e-08!6;UBERON:0002028!4.91e-08!6;UBERON:0007277!4.91e-08!6;UBERON:0000970!5.41e-08!9;UBERON:0000019!5.41e-08!9;UBERON:0000047!5.41e-08!9;UBERON:0004088!5.41e-08!9;UBERON:0002104!5.41e-08!9;UBERON:0001456!5.41e-08!9;UBERON:0003072!5.41e-08!9;UBERON:0003071!5.41e-08!9;UBERON:0004128!5.41e-08!9;UBERON:0002240!7.89e-08!6;UBERON:0005174!7.89e-08!6;UBERON:0001137!7.89e-08!6;UBERON:0002619!2.88e-07!17;UBERON:0004684!5.65e-07!3;UBERON:0002275!5.65e-07!3;UBERON:0000956!6.40e-07!21;UBERON:0001869!6.40e-07!21;UBERON:0000203!6.40e-07!21;UBERON:0002038!7.04e-07!3;UBERON:0002308!7.04e-07!3;UBERON:0009663!7.04e-07!3;UBERON:0009661!7.04e-07!3;UBERON:0006331!7.04e-07!3;UBERON:0000125!7.04e-07!3;UBERON:0000025!8.42e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.64e-24,54;UBERON:0001017,1.22e-21,73;UBERON:0001016,5.59e-21,75;UBERON:0001049,6.64e-20,52;UBERON:0005068,6.64e-20,52;UBERON:0006241,6.64e-20,52;UBERON:0007135,6.64e-20,52;UBERON:0000955,2.02e-19,47;UBERON:0006238,2.02e-19,47;UBERON:0002616,2.33e-17,46;UBERON:0002950,7.45e-17,4;UBERON:0001891,7.45e-17,4;UBERON:0009616,7.45e-17,4;UBERON:0010286,7.45e-17,4;UBERON:0004121,7.02e-16,95;UBERON:0000924,7.02e-16,95;UBERON:0006601,7.02e-16,95;UBERON:0002346,1.25e-15,64;UBERON:0003075,1.25e-15,64;UBERON:0007284,1.25e-15,64;UBERON:0010371,2.44e-13,73;UBERON:0004684,3.20e-13,3;UBERON:0002275,3.20e-13,3;UBERON:0002038,5.12e-13,3;UBERON:0009663,5.12e-13,3;UBERON:0009661,5.12e-13,3;UBERON:0000125,5.12e-13,3;UBERON:0002308,5.12e-13,3;UBERON:0003076,5.55e-12,12;UBERON:0003057,5.55e-12,12;UBERON:0004733,3.69e-11,6;UBERON:0004732,3.69e-11,6;UBERON:0002028,3.69e-11,6;UBERON:0007277,3.69e-11,6;UBERON:0003080,1.69e-10,40;UBERON:0010314,5.73e-10,92;UBERON:0001896,8.48e-10,2;UBERON:0002298,8.48e-10,2;UBERON:0005290,8.48e-10,2;UBERON:0010096,8.48e-10,2;UBERON:0002780,7.84e-09,39;UBERON:0001890,7.84e-09,39;UBERON:0006240,7.84e-09,39;UBERON:0002420,1.94e-08,8;UBERON:0007245,1.94e-08,8;UBERON:0010009,1.94e-08,8;UBERON:0010011,1.94e-08,8;UBERON:0000454,1.94e-08,8;UBERON:0002020,2.94e-08,34;UBERON:0003056,3.10e-08,49;UBERON:0003528,7.73e-08,29;UBERON:0002791,7.73e-08,29;UBERON:0001893,7.73e-08,29;UBERON:0000025,1.84e-07,114;UBERON:0004111,9.01e-07,122|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.159992422793407,0,1.14846392823004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,0.883474163806454,0,0,0,2.20231761998777,3.57524546638526,3.22573719838111,0,0,0,5.02529398202486,1.12552522006336,2.90316670775939,0.589257170947335,0.569486723196412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,1.04723353406728,0,0,0,0,2.69623150928681,2.28750301409313,0,1.04294592115366,0,4.98691306942944,1.94689515681309,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0,0,0.452114453507145,0.272145996605311,0.2562274405697,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10092241953609,4.57125577709592,0,0,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.11903496634682,0,0,0,0,0,0,0,0,0,0,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319880 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=F6R793 | |||
|association_with_transcript=-18bp_to_ENSMUST00000148910_5end | |||
|cluster_id=chr10:94013564..94013578,+ | |||
|description=CAGE_peak_15_at_Tmcc3_5end | |||
|id=chr10:94013564..94013578,+ | |||
|ontology_enrichment_celltype=CL:0002610!5.65e-07!3;CL:0002614!7.04e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,3.20e-13,3;CL:0002614,5.12e-13,3;CL:0000117,4.85e-08,23;CL:0000337,4.85e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.82e-25!63;UBERON:0001017!1.27e-22!73;UBERON:0005743!1.27e-22!73;UBERON:0002346!1.45e-22!71;UBERON:0003075!1.45e-22!71;UBERON:0007284!1.45e-22!71;UBERON:0004121!7.04e-22!102;UBERON:0000924!7.04e-22!102;UBERON:0006601!7.04e-22!102;UBERON:0000073!8.90e-22!75;UBERON:0001016!8.90e-22!75;UBERON:0001049!1.13e-20!52;UBERON:0005068!1.13e-20!52;UBERON:0006241!1.13e-20!52;UBERON:0007135!1.13e-20!52;UBERON:0000955!2.74e-20!50;UBERON:0006238!2.74e-20!50;UBERON:0002616!5.61e-19!49;UBERON:0007811!5.34e-16!86;UBERON:0003056!8.25e-16!49;UBERON:0003076!2.39e-14!12;UBERON:0003057!2.39e-14!12;UBERON:0000153!6.67e-14!94;UBERON:0002020!9.95e-14!34;UBERON:0002298!1.90e-12!6;UBERON:0002021!1.32e-10!10;UBERON:0000411!1.32e-10!10;UBERON:0001950!1.32e-10!10;UBERON:0003080!6.36e-10!40;UBERON:0002791!9.62e-10!29;UBERON:0003528!9.62e-10!29;UBERON:0001893!9.62e-10!29;UBERON:0002780!7.26e-09!39;UBERON:0001890!7.26e-09!39;UBERON:0006240!7.26e-09!39;UBERON:0002950!1.14e-08!4;UBERON:0001891!1.14e-08!4;UBERON:0009616!1.14e-08!4;UBERON:0004733!4.91e-08!6;UBERON:0004732!4.91e-08!6;UBERON:0002028!4.91e-08!6;UBERON:0007277!4.91e-08!6;UBERON:0000970!5.41e-08!9;UBERON:0000019!5.41e-08!9;UBERON:0000047!5.41e-08!9;UBERON:0004088!5.41e-08!9;UBERON:0002104!5.41e-08!9;UBERON:0001456!5.41e-08!9;UBERON:0003072!5.41e-08!9;UBERON:0003071!5.41e-08!9;UBERON:0004128!5.41e-08!9;UBERON:0002240!7.89e-08!6;UBERON:0005174!7.89e-08!6;UBERON:0001137!7.89e-08!6;UBERON:0002619!2.88e-07!17;UBERON:0004684!5.65e-07!3;UBERON:0002275!5.65e-07!3;UBERON:0000956!6.40e-07!21;UBERON:0001869!6.40e-07!21;UBERON:0000203!6.40e-07!21;UBERON:0002038!7.04e-07!3;UBERON:0002308!7.04e-07!3;UBERON:0009663!7.04e-07!3;UBERON:0009661!7.04e-07!3;UBERON:0006331!7.04e-07!3;UBERON:0000125!7.04e-07!3;UBERON:0000025!8.42e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.64e-24,54;UBERON:0001017,1.22e-21,73;UBERON:0001016,5.59e-21,75;UBERON:0001049,6.64e-20,52;UBERON:0005068,6.64e-20,52;UBERON:0006241,6.64e-20,52;UBERON:0007135,6.64e-20,52;UBERON:0000955,2.02e-19,47;UBERON:0006238,2.02e-19,47;UBERON:0002616,2.33e-17,46;UBERON:0002950,7.45e-17,4;UBERON:0001891,7.45e-17,4;UBERON:0009616,7.45e-17,4;UBERON:0010286,7.45e-17,4;UBERON:0004121,7.02e-16,95;UBERON:0000924,7.02e-16,95;UBERON:0006601,7.02e-16,95;UBERON:0002346,1.25e-15,64;UBERON:0003075,1.25e-15,64;UBERON:0007284,1.25e-15,64;UBERON:0010371,2.44e-13,73;UBERON:0004684,3.20e-13,3;UBERON:0002275,3.20e-13,3;UBERON:0002038,5.12e-13,3;UBERON:0009663,5.12e-13,3;UBERON:0009661,5.12e-13,3;UBERON:0000125,5.12e-13,3;UBERON:0002308,5.12e-13,3;UBERON:0003076,5.55e-12,12;UBERON:0003057,5.55e-12,12;UBERON:0004733,3.69e-11,6;UBERON:0004732,3.69e-11,6;UBERON:0002028,3.69e-11,6;UBERON:0007277,3.69e-11,6;UBERON:0003080,1.69e-10,40;UBERON:0010314,5.73e-10,92;UBERON:0001896,8.48e-10,2;UBERON:0002298,8.48e-10,2;UBERON:0005290,8.48e-10,2;UBERON:0010096,8.48e-10,2;UBERON:0002780,7.84e-09,39;UBERON:0001890,7.84e-09,39;UBERON:0006240,7.84e-09,39;UBERON:0002420,1.94e-08,8;UBERON:0007245,1.94e-08,8;UBERON:0010009,1.94e-08,8;UBERON:0010011,1.94e-08,8;UBERON:0000454,1.94e-08,8;UBERON:0002020,2.94e-08,34;UBERON:0003056,3.10e-08,49;UBERON:0003528,7.73e-08,29;UBERON:0002791,7.73e-08,29;UBERON:0001893,7.73e-08,29;UBERON:0000025,1.84e-07,114;UBERON:0004111,9.01e-07,122 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.159992422793407,0,1.14846392823004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,0.883474163806454,0,0,0,2.20231761998777,3.57524546638526,3.22573719838111,0,0,0,5.02529398202486,1.12552522006336,2.90316670775939,0.589257170947335,0.569486723196412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,1.04723353406728,0,0,0,0,2.69623150928681,2.28750301409313,0,1.04294592115366,0,4.98691306942944,1.94689515681309,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0,0,0.452114453507145,0.272145996605311,0.2562274405697,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10092241953609,4.57125577709592,0,0,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.11903496634682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30162618253588,1.14579102687879,0.859265911718438,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p15@Tmcc3 | |||
}} |
Latest revision as of 14:46, 26 September 2015
Short description: | p15@Tmcc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_Tmcc3_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -18bp_to_ENSMUST00000148910_5end |
EntrezGene: | Tmcc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 3.20e-13 | 3 |
neuron of the substantia nigra | 5.12e-13 | 3 |
CNS neuron (sensu Vertebrata) | 4.85e-08 | 23 |
neuroblast (sensu Vertebrata) | 4.85e-08 | 23 |