FFCP PHASE1:Hg19::chr9:92112886..92112897,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:92112886..92112897,-
|short_description=p4@SEMA4D
|description=CAGE_peak_4_at_SEMA4D_5end
|association_with_transcript=0bp_to_uc004aqp.1_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10507 | |EntrezGene=10507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10732 | |HGNC=10732 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc004aqp.1_5end | |||
|cluster_id=chr9:92112886..92112897,- | |||
|description=CAGE_peak_4_at_SEMA4D_5end | |||
|id=chr9:92112886..92112897,- | |||
|ontology_enrichment_celltype=CL:0000037!6.03e-17!172;CL:0000566!6.03e-17!172;CL:0000738!6.48e-17!140;CL:0002032!1.97e-15!165;CL:0000837!1.97e-15!165;CL:0000988!5.78e-15!182;CL:0002087!2.44e-12!119;CL:0002031!3.26e-12!124;CL:0000766!2.34e-10!76;CL:0002057!5.14e-09!42;CL:0000763!8.20e-09!112;CL:0000049!8.20e-09!112;CL:0000860!9.70e-09!45;CL:0000838!1.41e-07!52;CL:0000094!2.66e-07!8;CL:0000542!3.06e-07!53;CL:0000051!3.06e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000094;5.07e-10;8!CL:0000623;6.74e-10;3!CL:0000771;1.94e-07;2!CL:0000081;3.53e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,5.42e-10,8;CL:0000623,1.13e-09,3;CL:0000825,1.13e-09,3;CL:0000771,1.66e-07,2;CL:0000081,3.70e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.50e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.43e-32!115;UBERON:0001049!2.39e-20!57;UBERON:0005068!2.39e-20!57;UBERON:0006241!2.39e-20!57;UBERON:0007135!2.39e-20!57;UBERON:0002780!3.07e-16!41;UBERON:0001890!3.07e-16!41;UBERON:0006240!3.07e-16!41;UBERON:0001017!4.43e-16!82;UBERON:0005743!7.28e-16!86;UBERON:0003080!1.58e-15!42;UBERON:0002616!2.32e-15!59;UBERON:0001893!2.22e-14!34;UBERON:0000073!2.37e-14!94;UBERON:0001016!2.37e-14!94;UBERON:0002020!2.48e-14!34;UBERON:0003528!2.48e-14!34;UBERON:0000955!5.48e-14!69;UBERON:0006238!5.48e-14!69;UBERON:0002791!1.20e-13!33;UBERON:0001869!8.42e-13!32;UBERON:0003075!2.17e-12!86;UBERON:0007284!2.17e-12!86;UBERON:0002346!4.87e-11!90;UBERON:0003056!3.73e-09!61;UBERON:0002619!7.26e-09!22;UBERON:0000153!9.23e-09!129;UBERON:0007811!9.23e-09!129;UBERON:0002390!1.78e-08!102;UBERON:0003061!1.78e-08!102;UBERON:0000956!2.13e-08!25;UBERON:0000203!2.13e-08!25;UBERON:0002308!3.15e-08!9;UBERON:0000125!3.15e-08!9;UBERON:0002420!6.35e-08!9;UBERON:0007245!6.35e-08!9;UBERON:0010009!6.35e-08!9;UBERON:0010011!6.35e-08!9;UBERON:0000454!6.35e-08!9;UBERON:0001950!1.22e-07!20;UBERON:0000033!2.07e-07!123;UBERON:0002193!2.22e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.56e-22;53!UBERON:0002616;3.56e-22;53!UBERON:0001893;1.29e-21;34!UBERON:0002780;3.91e-21;41!UBERON:0001890;3.91e-21;41!UBERON:0003528;2.96e-19;34!UBERON:0002020;2.96e-19;34!UBERON:0002791;5.00e-19;32!UBERON:0001869;7.72e-19;32!UBERON:0002298;1.28e-18;6!UBERON:0002619;2.72e-17;22!UBERON:0000955;1.58e-16;68!UBERON:0001950;3.68e-16;20!UBERON:0000956;5.67e-15;25!UBERON:0000203;5.67e-15;25!UBERON:0004732;4.10e-14;13!UBERON:0001017;8.22e-14;75!UBERON:0000125;2.02e-12;9!UBERON:0002308;2.02e-12;9!UBERON:0001016;5.32e-12;83!UBERON:0004733;6.22e-12;12!UBERON:0002028;6.22e-12;12!UBERON:0000988;2.82e-10;3!UBERON:0001896;4.65e-10;3!UBERON:0005290;4.65e-10;3!UBERON:0007023;5.68e-09;114!UBERON:0000200;2.37e-08;6!UBERON:0001897;7.82e-08;2!UBERON:0001875;7.82e-08;2!UBERON:0006514;7.82e-08;2!UBERON:0010225;7.82e-08;2!UBERON:0009663;1.16e-07;7!UBERON:0005162;1.68e-07;2!UBERON:0000122;1.68e-07;2!UBERON:0002148;2.84e-07;2!UBERON:0006331;2.84e-07;2!UBERON:0009662;2.84e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.97e-43,56;UBERON:0005068,2.97e-43,56;UBERON:0006241,2.97e-43,56;UBERON:0007135,2.97e-43,56;UBERON:0000073,7.12e-40,53;UBERON:0002616,7.12e-40,53;UBERON:0000955,1.81e-36,68;UBERON:0006238,1.81e-36,68;UBERON:0001017,8.65e-34,81;UBERON:0001016,1.10e-31,89;UBERON:0003075,3.40e-29,82;UBERON:0007284,3.40e-29,82;UBERON:0002780,5.69e-29,41;UBERON:0001890,5.69e-29,41;UBERON:0003080,5.69e-29,41;UBERON:0006240,5.69e-29,41;UBERON:0002346,1.82e-27,86;UBERON:0001893,1.56e-25,34;UBERON:0007023,2.03e-25,114;UBERON:0003528,2.09e-25,34;UBERON:0002020,2.09e-25,34;UBERON:0010371,2.50e-21,104;UBERON:0002791,3.47e-21,32;UBERON:0001869,4.44e-21,32;UBERON:0003056,1.08e-19,61;UBERON:0002298,9.58e-19,6;UBERON:0002619,1.57e-17,22;UBERON:0010314,1.81e-16,132;UBERON:0001950,2.25e-16,20;UBERON:0003076,2.43e-15,15;UBERON:0003057,2.43e-15,15;UBERON:0000956,3.50e-15,25;UBERON:0000203,3.50e-15,25;UBERON:0004732,2.49e-14,13;UBERON:0000125,1.25e-12,9;UBERON:0002308,1.25e-12,9;UBERON:0004121,1.41e-12,171;UBERON:0000924,1.41e-12,171;UBERON:0006601,1.41e-12,171;UBERON:0004733,4.49e-12,12;UBERON:0002028,4.49e-12,12;UBERON:0007277,4.49e-12,12;UBERON:0011216,9.97e-11,223;UBERON:0000988,1.63e-10,3;UBERON:0001896,5.92e-10,3;UBERON:0005290,5.92e-10,3;UBERON:0010096,5.92e-10,3;UBERON:0000025,9.48e-09,192;UBERON:0000200,1.37e-08,6;UBERON:0001897,6.46e-08,2;UBERON:0010225,6.46e-08,2;UBERON:0001875,9.28e-08,2;UBERON:0006514,9.28e-08,2;UBERON:0009663,9.44e-08,7;UBERON:0005162,1.28e-07,2;UBERON:0000122,1.28e-07,2;UBERON:0002148,1.95e-07,2;UBERON:0006331,1.95e-07,2;UBERON:0009662,1.95e-07,2 | |||
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| ||
|short_description=p4@SEMA4D | |||
}} | }} |
Latest revision as of 05:31, 18 September 2015
Short description: | p4@SEMA4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SEMA4D_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc004aqp.1_5end |
EntrezGene: | SEMA4D |
HGNC: | 10732 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 5.42e-10 | 8 |
natural killer cell | 1.13e-09 | 3 |
pro-NK cell | 1.13e-09 | 3 |
eosinophil | 1.66e-07 | 2 |
blood cell | 3.70e-07 | 11 |