FFCP PHASE1:Mm9::chr17:29375151..29375197,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=240058|HGNC=|MCL_coexpression_id=13|UniProt=Q8JZW4,E9Q7V9|association_with_transcript=-409bp_to_ENSMUST00000024805,ENSMUST00000057091_5end|description=CAGE_peak_3_at_Cpne5_5end|id=chr17:29375151..29375197,-|ontology_enrichment_celltype=CL:0000117!1.12e-16!23;CL:0000337!1.12e-16!23;CL:0000540!1.11e-10!33;CL:0000047!1.11e-10!33;CL:0000031!1.11e-10!33;CL:0000404!1.11e-10!33;CL:0000393!9.18e-08!39;CL:0000211!9.18e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,4.47e-24,23;CL:0000337,4.47e-24,23;CL:0000540,3.77e-15,33;CL:0000047,3.77e-15,33;CL:0000031,3.77e-15,33;CL:0000404,3.77e-15,33;CL:0000393,5.09e-12,39;CL:0000211,5.09e-12,39;CL:0002319,1.97e-10,43;CL:0000221,4.42e-10,44;CL:0000133,4.42e-10,44;CL:0002612,7.81e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!5.02e-22!34;UBERON:0001049!5.80e-19!52;UBERON:0005068!5.80e-19!52;UBERON:0006241!5.80e-19!52;UBERON:0007135!5.80e-19!52;UBERON:0000033!6.39e-19!63;UBERON:0001017!3.07e-18!73;UBERON:0005743!3.07e-18!73;UBERON:0003056!1.94e-17!49;UBERON:0000955!2.76e-17!50;UBERON:0006238!2.76e-17!50;UBERON:0000073!2.86e-17!75;UBERON:0001016!2.86e-17!75;UBERON:0002791!2.89e-17!29;UBERON:0003528!2.89e-17!29;UBERON:0001893!2.89e-17!29;UBERON:0002616!1.53e-16!49;UBERON:0002346!1.63e-16!71;UBERON:0003075!1.63e-16!71;UBERON:0007284!1.63e-16!71;UBERON:0003080!2.02e-15!40;UBERON:0002780!1.59e-14!39;UBERON:0001890!1.59e-14!39;UBERON:0006240!1.59e-14!39;UBERON:0004121!4.91e-14!102;UBERON:0000924!4.91e-14!102;UBERON:0006601!4.91e-14!102;UBERON:0000956!6.78e-11!21;UBERON:0001869!6.78e-11!21;UBERON:0000203!6.78e-11!21;UBERON:0007811!1.15e-10!86;UBERON:0002021!8.93e-10!10;UBERON:0000411!8.93e-10!10;UBERON:0001950!8.93e-10!10;UBERON:0002619!3.46e-09!17;UBERON:0000153!5.48e-09!94;UBERON:0002420!7.04e-08!8;UBERON:0007245!7.04e-08!8;UBERON:0010009!7.04e-08!8;UBERON:0010011!7.04e-08!8;UBERON:0000454!7.04e-08!8;UBERON:0000025!1.11e-07!114;UBERON:0004111!5.67e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.67e-35,54;UBERON:0002020,5.80e-35,34;UBERON:0001017,1.29e-30,73;UBERON:0001049,7.68e-30,52;UBERON:0005068,7.68e-30,52;UBERON:0006241,7.68e-30,52;UBERON:0007135,7.68e-30,52;UBERON:0001016,1.62e-29,75;UBERON:0003528,1.85e-26,29;UBERON:0002791,1.85e-26,29;UBERON:0001893,1.85e-26,29;UBERON:0002346,1.08e-25,64;UBERON:0003075,1.08e-25,64;UBERON:0007284,1.08e-25,64;UBERON:0000955,2.35e-24,47;UBERON:0006238,2.35e-24,47;UBERON:0004121,1.04e-23,95;UBERON:0000924,1.04e-23,95;UBERON:0006601,1.04e-23,95;UBERON:0003080,1.16e-23,40;UBERON:0002616,4.48e-23,46;UBERON:0002780,4.32e-22,39;UBERON:0001890,4.32e-22,39;UBERON:0006240,4.32e-22,39;UBERON:0010371,2.33e-21,73;UBERON:0003056,3.95e-21,49;UBERON:0002619,7.42e-17,17;UBERON:0002021,1.30e-16,10;UBERON:0000411,1.30e-16,10;UBERON:0001950,1.30e-16,10;UBERON:0000956,3.23e-15,21;UBERON:0001869,3.23e-15,21;UBERON:0000203,3.23e-15,21;UBERON:0010314,5.09e-15,92;UBERON:0002420,3.84e-13,8;UBERON:0007245,3.84e-13,8;UBERON:0010009,3.84e-13,8;UBERON:0010011,3.84e-13,8;UBERON:0000454,3.84e-13,8;UBERON:0001948,4.81e-10,5;UBERON:0002315,4.81e-10,5;UBERON:0000369,1.77e-09,5;UBERON:0002435,1.77e-09,5;UBERON:0000204,1.77e-09,5;UBERON:0010082,1.77e-09,5;UBERON:0000025,8.03e-09,114;UBERON:0002240,2.92e-08,6;UBERON:0005174,2.92e-08,6;UBERON:0001137,2.92e-08,6;UBERON:0004111,1.05e-07,122;UBERON:0002950,4.55e-07,4;UBERON:0001891,4.55e-07,4;UBERON:0009616,4.55e-07,4;UBERON:0010286,4.55e-07,4;UBERON:0002257,7.81e-07,3|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.04632921719196,7.93486468908049,3.1691570175309,0,0,0,0,0,0,0,0.311068836925433,0.675029691658453,0.210324961351382,9.99778445413313,4.19650227808066,1.5923803897944,1.15014565221884,0,5.50579404996943,4.34136949489638,6.29786786350598,5.27545150920775,4.94033275453012,6.77187381723788,2.79182999001381,1.12552522006336,3.36156145108982,10.9012576625257,10.6778760599327,5.59198337475902,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7849260371472,5.94750783664214,4.64921102817598,5.9100268865374,5.62574006126727,6.02585329222724,4.86723789203273,0,0.373220911830279,0.505445516867349,0.420883711772948,0.130120442962704,0,0,0.60281927134286,0.680364991513279,0.896796041993948,1.49922759295566,1.29351685369508,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0.828503090142008,0.469052119962192,0.540186184383045,0.23674473558521,0.590292695242212,0.308534225774757,0.465067889500816,0,0,0.329119699826961,0,0,0.146199987425332,0.658650345873152,0,1.47202963994889,2.05809224758569,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,1.44495530989013,1.87538698547525,0,0,0,0,0.215423397732799,0,0,0,0,0,0,3.53453448063988,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0,0.322928853391811,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.209718688851422,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.226730383615211,0,0,0,0,0,0,0,0,4.51801474093653,2.76195141904306,2.86447756719698,2.57779773515531,6.16574267793578,6.7985450765073,2.70009000092722,6.75481804836331,4.98456649882625,7.24864436452548,0,0.399024873401031,0.512200817262403,0,0,0.919217542250071,1.55572709461131,1.03017528619447,2.88827288632634,1.01078884705519,0.760437899670719,0.377252682772152,0.561849044819294,0.576226371643824,0.631790158511746,0.476293691283074,0.811190281613988,0.77163688185482,0.412085900803307,1.32479028120958,0,0.354951612318675,0.953744759789284,1.16277133305863,0.846984423737976,0.423073039458382,0.73171189149109,0.789209134313529,0.543216455383447,1.12228454331548,1.18635018124174,0.492522411877817,0,0.77468420592983,1.15743966588685,2.24829520144151,0.701794825336225,1.71896843238639,0.382576664137687,0.441182838239031,0.231867835620421|short_description=p3@Cpne5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=240058 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q8JZW4,E9Q7V9 | |||
|association_with_transcript=-409bp_to_ENSMUST00000024805,ENSMUST00000057091_5end | |||
|cluster_id=chr17:29375151..29375197,- | |||
|description=CAGE_peak_3_at_Cpne5_5end | |||
|id=chr17:29375151..29375197,- | |||
|ontology_enrichment_celltype=CL:0000117!1.12e-16!23;CL:0000337!1.12e-16!23;CL:0000540!1.11e-10!33;CL:0000047!1.11e-10!33;CL:0000031!1.11e-10!33;CL:0000404!1.11e-10!33;CL:0000393!9.18e-08!39;CL:0000211!9.18e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.47e-24,23;CL:0000337,4.47e-24,23;CL:0000540,3.77e-15,33;CL:0000047,3.77e-15,33;CL:0000031,3.77e-15,33;CL:0000404,3.77e-15,33;CL:0000393,5.09e-12,39;CL:0000211,5.09e-12,39;CL:0002319,1.97e-10,43;CL:0000221,4.42e-10,44;CL:0000133,4.42e-10,44;CL:0002612,7.81e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.02e-22!34;UBERON:0001049!5.80e-19!52;UBERON:0005068!5.80e-19!52;UBERON:0006241!5.80e-19!52;UBERON:0007135!5.80e-19!52;UBERON:0000033!6.39e-19!63;UBERON:0001017!3.07e-18!73;UBERON:0005743!3.07e-18!73;UBERON:0003056!1.94e-17!49;UBERON:0000955!2.76e-17!50;UBERON:0006238!2.76e-17!50;UBERON:0000073!2.86e-17!75;UBERON:0001016!2.86e-17!75;UBERON:0002791!2.89e-17!29;UBERON:0003528!2.89e-17!29;UBERON:0001893!2.89e-17!29;UBERON:0002616!1.53e-16!49;UBERON:0002346!1.63e-16!71;UBERON:0003075!1.63e-16!71;UBERON:0007284!1.63e-16!71;UBERON:0003080!2.02e-15!40;UBERON:0002780!1.59e-14!39;UBERON:0001890!1.59e-14!39;UBERON:0006240!1.59e-14!39;UBERON:0004121!4.91e-14!102;UBERON:0000924!4.91e-14!102;UBERON:0006601!4.91e-14!102;UBERON:0000956!6.78e-11!21;UBERON:0001869!6.78e-11!21;UBERON:0000203!6.78e-11!21;UBERON:0007811!1.15e-10!86;UBERON:0002021!8.93e-10!10;UBERON:0000411!8.93e-10!10;UBERON:0001950!8.93e-10!10;UBERON:0002619!3.46e-09!17;UBERON:0000153!5.48e-09!94;UBERON:0002420!7.04e-08!8;UBERON:0007245!7.04e-08!8;UBERON:0010009!7.04e-08!8;UBERON:0010011!7.04e-08!8;UBERON:0000454!7.04e-08!8;UBERON:0000025!1.11e-07!114;UBERON:0004111!5.67e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.67e-35,54;UBERON:0002020,5.80e-35,34;UBERON:0001017,1.29e-30,73;UBERON:0001049,7.68e-30,52;UBERON:0005068,7.68e-30,52;UBERON:0006241,7.68e-30,52;UBERON:0007135,7.68e-30,52;UBERON:0001016,1.62e-29,75;UBERON:0003528,1.85e-26,29;UBERON:0002791,1.85e-26,29;UBERON:0001893,1.85e-26,29;UBERON:0002346,1.08e-25,64;UBERON:0003075,1.08e-25,64;UBERON:0007284,1.08e-25,64;UBERON:0000955,2.35e-24,47;UBERON:0006238,2.35e-24,47;UBERON:0004121,1.04e-23,95;UBERON:0000924,1.04e-23,95;UBERON:0006601,1.04e-23,95;UBERON:0003080,1.16e-23,40;UBERON:0002616,4.48e-23,46;UBERON:0002780,4.32e-22,39;UBERON:0001890,4.32e-22,39;UBERON:0006240,4.32e-22,39;UBERON:0010371,2.33e-21,73;UBERON:0003056,3.95e-21,49;UBERON:0002619,7.42e-17,17;UBERON:0002021,1.30e-16,10;UBERON:0000411,1.30e-16,10;UBERON:0001950,1.30e-16,10;UBERON:0000956,3.23e-15,21;UBERON:0001869,3.23e-15,21;UBERON:0000203,3.23e-15,21;UBERON:0010314,5.09e-15,92;UBERON:0002420,3.84e-13,8;UBERON:0007245,3.84e-13,8;UBERON:0010009,3.84e-13,8;UBERON:0010011,3.84e-13,8;UBERON:0000454,3.84e-13,8;UBERON:0001948,4.81e-10,5;UBERON:0002315,4.81e-10,5;UBERON:0000369,1.77e-09,5;UBERON:0002435,1.77e-09,5;UBERON:0000204,1.77e-09,5;UBERON:0010082,1.77e-09,5;UBERON:0000025,8.03e-09,114;UBERON:0002240,2.92e-08,6;UBERON:0005174,2.92e-08,6;UBERON:0001137,2.92e-08,6;UBERON:0004111,1.05e-07,122;UBERON:0002950,4.55e-07,4;UBERON:0001891,4.55e-07,4;UBERON:0009616,4.55e-07,4;UBERON:0010286,4.55e-07,4;UBERON:0002257,7.81e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.04632921719196,7.93486468908049,3.1691570175309,0,0,0,0,0,0,0,0.311068836925433,0.675029691658453,0.210324961351382,9.99778445413313,4.19650227808066,1.5923803897944,1.15014565221884,0,5.50579404996943,4.34136949489638,6.29786786350598,5.27545150920775,4.94033275453012,6.77187381723788,2.79182999001381,1.12552522006336,3.36156145108982,10.9012576625257,10.6778760599327,5.59198337475902,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7849260371472,5.94750783664214,4.64921102817598,5.9100268865374,5.62574006126727,6.02585329222724,4.86723789203273,0,0.373220911830279,0.505445516867349,0.420883711772948,0.130120442962704,0,0,0.60281927134286,0.680364991513279,0.896796041993948,1.49922759295566,1.29351685369508,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0.828503090142008,0.469052119962192,0.540186184383045,0.23674473558521,0.590292695242212,0.308534225774757,0.465067889500816,0,0,0.329119699826961,0,0,0.146199987425332,0.658650345873152,0,1.47202963994889,2.05809224758569,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,1.44495530989013,1.87538698547525,0,0,0,0,0.215423397732799,0,0,0,0,0,0,3.53453448063988,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0,0.322928853391811,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.209718688851422,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.226730383615211,0,0,0,0,0,0,0,0,4.51801474093653,2.76195141904306,2.86447756719698,2.57779773515531,6.16574267793578,6.7985450765073,2.70009000092722,6.75481804836331,4.98456649882625,7.24864436452548,0,0.399024873401031,0.512200817262403,0,0,0.919217542250071,1.55572709461131,1.03017528619447,2.88827288632634,1.01078884705519,0.760437899670719,0.377252682772152,0.561849044819294,0.576226371643824,0.631790158511746,0.476293691283074,0.811190281613988,0.77163688185482,0.412085900803307,1.32479028120958,0,0.354951612318675,0.953744759789284,1.16277133305863,0.846984423737976,0.423073039458382,0.73171189149109,0.789209134313529,0.543216455383447,1.12228454331548,1.18635018124174,0.492522411877817,0,0.77468420592983,1.15743966588685,2.24829520144151,0.701794825336225,1.71896843238639,0.382576664137687,0.441182838239031,0.231867835620421 | |||
|short_description=p3@Cpne5 | |||
}} |
Latest revision as of 04:55, 26 September 2015
Short description: | p3@Cpne5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cpne5_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -409bp_to_ENSMUST00000024805, ENSMUST00000057091_5end |
EntrezGene: | Cpne5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.47e-24 | 23 |
neuroblast (sensu Vertebrata) | 4.47e-24 | 23 |
neuron | 3.77e-15 | 33 |
neuronal stem cell | 3.77e-15 | 33 |
neuroblast | 3.77e-15 | 33 |
electrically signaling cell | 3.77e-15 | 33 |
electrically responsive cell | 5.09e-12 | 39 |
electrically active cell | 5.09e-12 | 39 |
neural cell | 1.97e-10 | 43 |
ectodermal cell | 4.42e-10 | 44 |
neurectodermal cell | 4.42e-10 | 44 |
neuron of the ventral spinal cord | 7.81e-07 | 3 |