FFCP PHASE1:Hg19::chr6:152793504..152793531,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23345 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17089 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=122bp_to_ENST00000468937_5end | |||
|cluster_id=chr6:152793504..152793531,- | |||
|description=CAGE_peak_18_at_SYNE1_5end | |||
|id=chr6:152793504..152793531,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.50e-07;1!DOID:4549;1.50e-07;1!DOID:5861;1.50e-07;1!DOID:6496;1.50e-07;1!DOID:2513;1.75e-07;1!DOID:4235;5.77e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.46e-07,1;DOID:4549,1.46e-07,1;DOID:5861,1.46e-07,1;DOID:6496,1.46e-07,1;DOID:2513,1.75e-07,1;DOID:4235,4.06e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001893!4.43e-40!34;UBERON:0002791!2.86e-38!33;UBERON:0001869!2.71e-37!32;UBERON:0002780!4.32e-37!41;UBERON:0001890!4.32e-37!41;UBERON:0006240!4.32e-37!41;UBERON:0003080!5.32e-36!42;UBERON:0002020!2.31e-34!34;UBERON:0003528!2.31e-34!34;UBERON:0002619!7.38e-33!22;UBERON:0001049!1.25e-31!57;UBERON:0005068!1.25e-31!57;UBERON:0006241!1.25e-31!57;UBERON:0007135!1.25e-31!57;UBERON:0002616!3.24e-30!59;UBERON:0001950!6.02e-29!20;UBERON:0000956!2.54e-28!25;UBERON:0000203!2.54e-28!25;UBERON:0000955!1.40e-27!69;UBERON:0006238!1.40e-27!69;UBERON:0003056!3.31e-25!61;UBERON:0001017!9.54e-25!82;UBERON:0005743!1.99e-24!86;UBERON:0003075!1.67e-21!86;UBERON:0007284!1.67e-21!86;UBERON:0000073!4.45e-21!94;UBERON:0001016!4.45e-21!94;UBERON:0002346!4.46e-20!90;UBERON:0000033!7.05e-20!123;UBERON:0000153!1.79e-19!129;UBERON:0007811!1.79e-19!129;UBERON:0007023!1.68e-16!115;UBERON:0002420!1.17e-13!9;UBERON:0007245!1.17e-13!9;UBERON:0010009!1.17e-13!9;UBERON:0010011!1.17e-13!9;UBERON:0000454!1.17e-13!9;UBERON:0004121!1.30e-13!169;UBERON:0000924!5.17e-13!173;UBERON:0006601!5.17e-13!173;UBERON:0000200!5.94e-13!6;UBERON:0001871!1.82e-12!7;UBERON:0000475!2.53e-11!365;UBERON:0000349!3.31e-11!5;UBERON:0009663!4.41e-10!7;UBERON:0000025!4.13e-09!194;UBERON:0002308!1.20e-07!9;UBERON:0000125!1.20e-07!9;UBERON:0000064!2.18e-07!219;UBERON:0002771!2.64e-07!3;UBERON:0002021!3.00e-07!5;UBERON:0001872!5.39e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.51e-46;32!UBERON:0002619;2.27e-45;22!UBERON:0002791;6.95e-41;32!UBERON:0000956;8.29e-40;25!UBERON:0000203;8.29e-40;25!UBERON:0001893;1.13e-39;34!UBERON:0003528;1.31e-37;34!UBERON:0002020;1.31e-37;34!UBERON:0001950;2.54e-36;20!UBERON:0000200;2.93e-33;6!UBERON:0002780;2.49e-28;41!UBERON:0001890;2.49e-28;41!UBERON:0000349;1.27e-18;5!UBERON:0001870;1.59e-17;3!UBERON:0000073;6.46e-17;53!UBERON:0002616;6.46e-17;53!UBERON:0000369;6.50e-14;4!UBERON:0002435;6.50e-14;4!UBERON:0000204;6.50e-14;4!UBERON:0001017;2.44e-13;75!UBERON:0000955;4.14e-13;68!UBERON:0001954;1.01e-12;2!UBERON:0003022;1.01e-12;2!UBERON:0002421;1.01e-12;2!UBERON:0002600;1.01e-12;2!UBERON:0002771;2.87e-12;2!UBERON:0002702;2.87e-12;2!UBERON:0002021;6.02e-11;5!UBERON:0002420;1.39e-10;9!UBERON:0007245;1.39e-10;9!UBERON:0010009;1.39e-10;9!UBERON:0010011;1.39e-10;9!UBERON:0000454;1.39e-10;9!UBERON:0005383;4.95e-09;3!UBERON:0005382;4.95e-09;3!UBERON:0001016;2.65e-08;83!UBERON:0009663;3.77e-08;7!UBERON:0001871;8.44e-08;6!UBERON:0001874;2.44e-07;1!UBERON:0002581;5.77e-07;1!UBERON:0001882;5.77e-07;1!UBERON:0002022;5.77e-07;1!UBERON:0007190;5.77e-07;1!UBERON:0005403;5.77e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,8.35e-52,32;UBERON:0001893,1.26e-48,34;UBERON:0002791,4.15e-46,32;UBERON:0002619,3.31e-45,22;UBERON:0003528,2.86e-43,34;UBERON:0002020,2.86e-43,34;UBERON:0002780,6.88e-40,41;UBERON:0001890,6.88e-40,41;UBERON:0003080,6.88e-40,41;UBERON:0006240,6.88e-40,41;UBERON:0000956,1.16e-39,25;UBERON:0000203,1.16e-39,25;UBERON:0001950,4.23e-36,20;UBERON:0000200,4.66e-33,6;UBERON:0000073,3.56e-30,53;UBERON:0002616,3.56e-30,53;UBERON:0001049,2.19e-28,56;UBERON:0005068,2.19e-28,56;UBERON:0006241,2.19e-28,56;UBERON:0007135,2.19e-28,56;UBERON:0003056,8.68e-26,61;UBERON:0000955,2.61e-25,68;UBERON:0006238,2.61e-25,68;UBERON:0001017,4.15e-23,81;UBERON:0001016,1.97e-20,89;UBERON:0000349,7.04e-19,5;UBERON:0003075,2.69e-18,82;UBERON:0007284,2.69e-18,82;UBERON:0001870,1.27e-17,3;UBERON:0002346,2.80e-17,86;UBERON:0010371,1.80e-15,104;UBERON:0000369,7.61e-14,4;UBERON:0002435,7.61e-14,4;UBERON:0000204,7.61e-14,4;UBERON:0010082,7.61e-14,4;UBERON:0010314,7.51e-13,132;UBERON:0001954,7.54e-13,2;UBERON:0003022,7.54e-13,2;UBERON:0002421,7.54e-13,2;UBERON:0002600,7.54e-13,2;UBERON:0002702,2.42e-12,2;UBERON:0002771,2.72e-12,2;UBERON:0004121,3.20e-11,171;UBERON:0000924,3.20e-11,171;UBERON:0006601,3.20e-11,171;UBERON:0007023,9.67e-11,114;UBERON:0002021,1.02e-10,5;UBERON:0002420,1.15e-10,9;UBERON:0007245,1.15e-10,9;UBERON:0010009,1.15e-10,9;UBERON:0010011,1.15e-10,9;UBERON:0000454,1.15e-10,9;UBERON:0005383,5.06e-09,3;UBERON:0005382,5.06e-09,3;UBERON:0009663,4.12e-08,7;UBERON:0001871,6.35e-08,6;UBERON:0000025,1.39e-07,192;UBERON:0011216,1.44e-07,223;UBERON:0001874,2.52e-07,1;UBERON:0001882,6.88e-07,1;UBERON:0005403,6.88e-07,1;UBERON:0007190,7.29e-07,1;UBERON:0002581,9.18e-07,1 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0.50133791063589,0.724232594804119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0,0,0,2.45190236639216,0.150238058906597,0,0.179389635688862,0,0.211931901159562,1.20036438433761,0,0,0,0.843881661206331,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0.773288812777695,0,0,0,2.99161459204025,0,0,0,0,0.415941723061614,1.60586089917446,1.41932173530541,0.819989904948992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,2.30192959932094,0,0,2.04682899626681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308061348417659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0.869932992075073,0.37064843820784,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.703347082052564,0,0,0,0.398495976502139,0,0,11.6586298052456,0,7.15391051622157,0,0,0,0,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0,4.82385754501632,0,0.221158519862449,0.295547618953547,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,11.7380648499695,0.225980740780532,0.411125773940253,0.596143835108969,1.51945910294109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,3.18091875923721,1.63444087333891,0,0,0,0,0,1.09349201984444,0,0,0,9.08162894066896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.70836770862748,1.251909307065,0,0,0.0620964029413835,0,0,0,0,0,1.87333962322753,0.434763085832475,0,0,0,0.378806010550178,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0.736423801007363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,1.41304295212211,1.41696576325585,0,1.02558182120378,2.01657356977374,0.899044282034833,0.968853873791107,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,1.2832141077495,1.56215619722769,0.826747186004736,0.634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.40781839786099,1.11813715056843,0,0,0,2.19961825882403,0,0,0,1.9110067515482,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0,1.69927114687817,0,0,0,0,0,0,0,0,0.286679166302903,0.157771562193185,0.679914901909147,0.436350690340377,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.827463966895162,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p18@SYNE1 | |||
}} |
Latest revision as of 06:50, 16 September 2015
Short description: | p18@SYNE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_SYNE1_5end |
Coexpression cluster: | NA |
Association with transcript: | 122bp_to_ENST00000468937_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.46e-07 | 1 |
extraosseous chondrosarcoma | 1.46e-07 | 1 |
myxoid chondrosarcoma | 1.46e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 1.46e-07 | 1 |
basal cell carcinoma | 1.75e-07 | 1 |
spindle cell sarcoma | 4.06e-07 | 1 |