FFCP PHASE1:Hg19::chrX:9880551..9880566,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:9880551..9880566,+
|short_description=p6@SHROOM2
|description=CAGE_peak_6_at_SHROOM2_5end
|association_with_transcript=139bp_to_ENST00000418909,uc004csv.2,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=357 | |EntrezGene=357 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=630 | |HGNC=630 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3B6 | |UniProt=F5H3B6 | ||
|association_with_transcript=139bp_to_ENST00000418909,uc004csv.2,uc011mic.1_5end | |||
|cluster_id=chrX:9880551..9880566,+ | |||
|description=CAGE_peak_6_at_SHROOM2_5end | |||
|id=chrX:9880551..9880566,+ | |||
|ontology_enrichment_celltype=CL:0002076!5.59e-12!43;CL:0002159!8.94e-09!13;CL:0002251!3.39e-08!21;CL:0000223!4.34e-08!59;CL:0002368!8.55e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.84e-11;2!CL:0002621;1.57e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,2.76e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.46e-07;82 | |||
|ontology_enrichment_disease=DOID:1749!6.54e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001950;4.63e-67;20!UBERON:0002619;6.79e-61;22!UBERON:0000956;2.01e-53;25!UBERON:0000203;2.01e-53;25!UBERON:0001869;4.22e-45;32!UBERON:0001893;6.68e-43;34!UBERON:0003528;8.64e-41;34!UBERON:0002020;8.64e-41;34!UBERON:0002791;7.19e-40;32!UBERON:0002780;7.49e-27;41!UBERON:0001890;7.49e-27;41!UBERON:0002021;1.35e-26;5!UBERON:0001872;3.80e-26;5!UBERON:0000200;4.26e-21;6!UBERON:0000073;1.71e-17;53!UBERON:0002616;1.71e-17;53!UBERON:0001017;1.74e-14;75!UBERON:0000955;9.71e-14;68!UBERON:0001016;6.46e-13;83!UBERON:0001871;1.00e-11;6!UBERON:0002771;2.84e-11;2!UBERON:0001870;1.57e-07;3!UBERON:0001949;1.57e-07;3!UBERON:0002902;8.32e-07;1!UBERON:0009899;8.32e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.12e-67,20;UBERON:0002619,1.86e-61,22;UBERON:0000956,6.44e-54,25;UBERON:0000203,6.44e-54,25;UBERON:0001869,4.08e-52,32;UBERON:0001893,6.89e-49,34;UBERON:0003528,1.13e-48,34;UBERON:0002020,1.13e-48,34;UBERON:0002791,1.28e-46,32;UBERON:0002780,5.19e-40,41;UBERON:0001890,5.19e-40,41;UBERON:0003080,5.19e-40,41;UBERON:0006240,5.19e-40,41;UBERON:0000073,1.82e-33,53;UBERON:0002616,1.82e-33,53;UBERON:0001049,1.83e-31,56;UBERON:0005068,1.83e-31,56;UBERON:0006241,1.83e-31,56;UBERON:0007135,1.83e-31,56;UBERON:0000955,1.72e-30,68;UBERON:0006238,1.72e-30,68;UBERON:0001017,3.40e-30,81;UBERON:0003056,1.46e-28,61;UBERON:0002021,8.53e-27,5;UBERON:0001016,1.04e-26,89;UBERON:0001872,2.97e-26,5;UBERON:0010371,1.35e-24,104;UBERON:0003075,2.22e-22,82;UBERON:0007284,2.22e-22,82;UBERON:0000200,3.07e-21,6;UBERON:0002346,3.94e-21,86;UBERON:0004121,2.70e-18,171;UBERON:0000924,2.70e-18,171;UBERON:0006601,2.70e-18,171;UBERON:0010314,4.00e-15,132;UBERON:0011216,6.92e-14,223;UBERON:0001871,8.29e-12,6;UBERON:0002771,3.00e-11,2;UBERON:0007023,1.68e-10,114;UBERON:0001870,1.02e-07,3;UBERON:0004111,1.22e-07,240;UBERON:0001949,2.76e-07,3;UBERON:0000025,5.32e-07,192;UBERON:0000483,7.33e-07,306;UBERON:0002902,8.81e-07,1;UBERON:0009899,8.81e-07,1;UBERON:0000119,9.73e-07,309 | |||
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| ||
|short_description=p6@SHROOM2 | |||
}} | }} |
Latest revision as of 15:40, 16 September 2015
Short description: | p6@SHROOM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SHROOM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 139bp_to_ENST00000418909, uc004csv.2, uc011mic.1_5end |
EntrezGene: | SHROOM2 |
HGNC: | 630 |
UniProt: | F5H3B6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 2.76e-07 | 3 |