FFCP PHASE1:Hg19::chr9:92112886..92112897,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10507 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10732 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc004aqp.1_5end | |||
|cluster_id=chr9:92112886..92112897,- | |||
|description=CAGE_peak_4_at_SEMA4D_5end | |||
|id=chr9:92112886..92112897,- | |||
|ontology_enrichment_celltype=CL:0000037!6.03e-17!172;CL:0000566!6.03e-17!172;CL:0000738!6.48e-17!140;CL:0002032!1.97e-15!165;CL:0000837!1.97e-15!165;CL:0000988!5.78e-15!182;CL:0002087!2.44e-12!119;CL:0002031!3.26e-12!124;CL:0000766!2.34e-10!76;CL:0002057!5.14e-09!42;CL:0000763!8.20e-09!112;CL:0000049!8.20e-09!112;CL:0000860!9.70e-09!45;CL:0000838!1.41e-07!52;CL:0000094!2.66e-07!8;CL:0000542!3.06e-07!53;CL:0000051!3.06e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000094;5.07e-10;8!CL:0000623;6.74e-10;3!CL:0000771;1.94e-07;2!CL:0000081;3.53e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,5.42e-10,8;CL:0000623,1.13e-09,3;CL:0000825,1.13e-09,3;CL:0000771,1.66e-07,2;CL:0000081,3.70e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.50e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.43e-32!115;UBERON:0001049!2.39e-20!57;UBERON:0005068!2.39e-20!57;UBERON:0006241!2.39e-20!57;UBERON:0007135!2.39e-20!57;UBERON:0002780!3.07e-16!41;UBERON:0001890!3.07e-16!41;UBERON:0006240!3.07e-16!41;UBERON:0001017!4.43e-16!82;UBERON:0005743!7.28e-16!86;UBERON:0003080!1.58e-15!42;UBERON:0002616!2.32e-15!59;UBERON:0001893!2.22e-14!34;UBERON:0000073!2.37e-14!94;UBERON:0001016!2.37e-14!94;UBERON:0002020!2.48e-14!34;UBERON:0003528!2.48e-14!34;UBERON:0000955!5.48e-14!69;UBERON:0006238!5.48e-14!69;UBERON:0002791!1.20e-13!33;UBERON:0001869!8.42e-13!32;UBERON:0003075!2.17e-12!86;UBERON:0007284!2.17e-12!86;UBERON:0002346!4.87e-11!90;UBERON:0003056!3.73e-09!61;UBERON:0002619!7.26e-09!22;UBERON:0000153!9.23e-09!129;UBERON:0007811!9.23e-09!129;UBERON:0002390!1.78e-08!102;UBERON:0003061!1.78e-08!102;UBERON:0000956!2.13e-08!25;UBERON:0000203!2.13e-08!25;UBERON:0002308!3.15e-08!9;UBERON:0000125!3.15e-08!9;UBERON:0002420!6.35e-08!9;UBERON:0007245!6.35e-08!9;UBERON:0010009!6.35e-08!9;UBERON:0010011!6.35e-08!9;UBERON:0000454!6.35e-08!9;UBERON:0001950!1.22e-07!20;UBERON:0000033!2.07e-07!123;UBERON:0002193!2.22e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.56e-22;53!UBERON:0002616;3.56e-22;53!UBERON:0001893;1.29e-21;34!UBERON:0002780;3.91e-21;41!UBERON:0001890;3.91e-21;41!UBERON:0003528;2.96e-19;34!UBERON:0002020;2.96e-19;34!UBERON:0002791;5.00e-19;32!UBERON:0001869;7.72e-19;32!UBERON:0002298;1.28e-18;6!UBERON:0002619;2.72e-17;22!UBERON:0000955;1.58e-16;68!UBERON:0001950;3.68e-16;20!UBERON:0000956;5.67e-15;25!UBERON:0000203;5.67e-15;25!UBERON:0004732;4.10e-14;13!UBERON:0001017;8.22e-14;75!UBERON:0000125;2.02e-12;9!UBERON:0002308;2.02e-12;9!UBERON:0001016;5.32e-12;83!UBERON:0004733;6.22e-12;12!UBERON:0002028;6.22e-12;12!UBERON:0000988;2.82e-10;3!UBERON:0001896;4.65e-10;3!UBERON:0005290;4.65e-10;3!UBERON:0007023;5.68e-09;114!UBERON:0000200;2.37e-08;6!UBERON:0001897;7.82e-08;2!UBERON:0001875;7.82e-08;2!UBERON:0006514;7.82e-08;2!UBERON:0010225;7.82e-08;2!UBERON:0009663;1.16e-07;7!UBERON:0005162;1.68e-07;2!UBERON:0000122;1.68e-07;2!UBERON:0002148;2.84e-07;2!UBERON:0006331;2.84e-07;2!UBERON:0009662;2.84e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.97e-43,56;UBERON:0005068,2.97e-43,56;UBERON:0006241,2.97e-43,56;UBERON:0007135,2.97e-43,56;UBERON:0000073,7.12e-40,53;UBERON:0002616,7.12e-40,53;UBERON:0000955,1.81e-36,68;UBERON:0006238,1.81e-36,68;UBERON:0001017,8.65e-34,81;UBERON:0001016,1.10e-31,89;UBERON:0003075,3.40e-29,82;UBERON:0007284,3.40e-29,82;UBERON:0002780,5.69e-29,41;UBERON:0001890,5.69e-29,41;UBERON:0003080,5.69e-29,41;UBERON:0006240,5.69e-29,41;UBERON:0002346,1.82e-27,86;UBERON:0001893,1.56e-25,34;UBERON:0007023,2.03e-25,114;UBERON:0003528,2.09e-25,34;UBERON:0002020,2.09e-25,34;UBERON:0010371,2.50e-21,104;UBERON:0002791,3.47e-21,32;UBERON:0001869,4.44e-21,32;UBERON:0003056,1.08e-19,61;UBERON:0002298,9.58e-19,6;UBERON:0002619,1.57e-17,22;UBERON:0010314,1.81e-16,132;UBERON:0001950,2.25e-16,20;UBERON:0003076,2.43e-15,15;UBERON:0003057,2.43e-15,15;UBERON:0000956,3.50e-15,25;UBERON:0000203,3.50e-15,25;UBERON:0004732,2.49e-14,13;UBERON:0000125,1.25e-12,9;UBERON:0002308,1.25e-12,9;UBERON:0004121,1.41e-12,171;UBERON:0000924,1.41e-12,171;UBERON:0006601,1.41e-12,171;UBERON:0004733,4.49e-12,12;UBERON:0002028,4.49e-12,12;UBERON:0007277,4.49e-12,12;UBERON:0011216,9.97e-11,223;UBERON:0000988,1.63e-10,3;UBERON:0001896,5.92e-10,3;UBERON:0005290,5.92e-10,3;UBERON:0010096,5.92e-10,3;UBERON:0000025,9.48e-09,192;UBERON:0000200,1.37e-08,6;UBERON:0001897,6.46e-08,2;UBERON:0010225,6.46e-08,2;UBERON:0001875,9.28e-08,2;UBERON:0006514,9.28e-08,2;UBERON:0009663,9.44e-08,7;UBERON:0005162,1.28e-07,2;UBERON:0000122,1.28e-07,2;UBERON:0002148,1.95e-07,2;UBERON:0006331,1.95e-07,2;UBERON:0009662,1.95e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.305653622991805,0.410502947249729,0.236132343941038,1.18009283054671,0.767658796194425,0.928896739896456,0,0,0,0.46480320348181,0,1.17440175733939,1.10799081706375,0.601633342410425,1.30206522429511,0,0,0.257575567634187,0.436194716338694,1.88937971844405,0.970336244751265,0.232429036905685,0,0.309706370895104,0.28769239232215,0.512321413058201,0.709446689665756,1.03423704220986,0.645484683583826,0,0,0,0,0,0.641858054152187,0.639337125799041,0.329851300186716,0.598390972864896,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0.605399502633369,0.368277635987565,0.949387162322653,0.211255286311942,0.212604299965044,0.419317291016752,0.22465726229299,0.300353785683013,0.16072558669708,0.285012743741249,0.19891667719909,0,0,0,0,0,0.400395987036012,0,0.661044872784862,0,0.569212969109448,1.17447437874188,0.382273228125229,1.32171328579026,0.560508562981536,0.263384084775077,0.393419540227666,0.786021525498329,1.02800749499755,0,0,0,0,0.557052284425868,0.294605907474837,0.886135578334485,0.270803863765016,0.512365278902701,0,0.164437904603676,0.276350017785848,0.579606171470105,0.444859689486181,0.802622484269139,2.09071047609954,0.453237370790265,0,1.37450978193052,0.759059076058509,0.637130828648193,0,0,1.05402583354441,0.383959833463255,0,0.710331756132051,2.46338399076314,0.201606743224732,0.534880391567015,1.01377082717959,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.982343066232845,0,0,0,0,0,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.795178609928912,0.464775771478074,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0.492663237895943,1.58487181223807,1.03664057770386,0.864719720501769,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,2.56139988262505,1.2937654491571,1.02674429023799,0,0,0.773288812777695,0.335032530668698,0,2.24702107184155,8.97484377612075,0.414415513436035,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.82707210449155,0.647142602455851,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0.902399225814824,0.308061348417659,0.784349769176855,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0,0.328014645699706,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.238231775457789,0.822724546172388,0.648473311192717,0.540031437238115,0,0,0,0,0,0.144269212976445,0.497992903438899,0.797131363644112,0.199579371432817,0.191505370132367,0,0,0.561594356226918,0,0.47003968731907,0,0.338583555603207,0.1605880751037,0.201799707191048,0,0.343505344755765,0,0,0,0.19538809540204,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0,0,0,0.111443384277478,0,0.23874448473769,0.296964680832639,0.307160702099232,0.994147647766298,0.984685914873589,0,0,0,0,0.552567831062295,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,1.93866549219044,2.13366625772258,1.99613798001194,0.260427761085233,0,0,0,0,0.236387681767936,0.689486746482929,0,0,0.885741385813839,0.723578631752448,0,0.552896299656123,1.47773809476774,0.87754158861589,0,0.278847488557207,0.153900517007594,0,0,0,0.108647371922008,0,0,0,0,0.31396051279005,0.664846727600626,0,0,0,0,0.158936578980379,0,0.326465616318295,0.141353071433941,0,0,0.353830258013357,0.611030144933625,0,1.11207545051853,0,7.07711896297109,0,3.51396668588009,0.182454789215666,0,0,0,0,0,0.252746318513952,0.300646838828985,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0,0.34945333648406,0,0,0.0730893170861856,0.0821154570532092,0.193978032976839,0,0,0.137041924646751,0,2.089256266544,0,0,0.640358984218058,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,3.00210144354895,2.32739144116388,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.268733889946905,0,0,0,0.0824158583811665,0,0,0.0846733320657845,0.795229689809303,1.36203406111576,0.321506296930038,0.275078873194468,0,0,0,2.06548492637284,0,0.86686278029118,1.41627387964495,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0.226624183040251,0,0,2.06852730178481,1.98348902614035,0,0,0.106787412567695,0.157204305099666,1.24271716604159,0.992332043623902,0.197611631897944,0,0.638341257770182,0,0,0,0,0.628216385000937,0,1.22026264901963,1.6274820991845,1.14681839138014,1.33114861844223,3.04272374412779,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0.260994291965212,0,0,0,0.179088841081487,0,0,0,0,0,0.76872455576384,0,0,0.967809053062115,0.194860308839388,0,0,0,0,0,0.59996218756479,0.106691729694141,0.172214979660816,0,0,0,0,0.127894371303652,0,0.157265941855896,0,0,0,0,0,0,0.0788617450012534,0,0,0,1.73418907760441,1.41696576325585,0.638535436228605,2.87162909937057,0,2.35134658378341,3.55246420390072,1.42769420259154,0.196295437002051,0,0.183428598521679,0.231051332300676,0,0,0,0.225630985047772,0,0.781514011233092,0,0.163771917510097,0,1.75597720007826,0,1.86018116851066,2.34638497717455,0,0.548257766857182,0,0,0,0,0.672567444437648,0,0.455324382702595,0.177404740325278,0.115233987555779,0,2.7867590520501,2.76245648963966,0,0,0.156986185701028,0.471346769748006,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0.691259661814092,0.430227358820278,0,0,0.423387050190929,0,0,0,0.671132590786754,0.294450700845729,0,0,0.615976841137482,3.4794432940146,0,0.701818390386317,0,0,0.33883824611688,0.219881033490858,0.452888530700021,0.385870790539723,0,0.470317296361523,0,0,1.57046773691956,1.18818560130834,0.8453114551668,0,0.0939839179798536,0.45120521581504,0,0,0,0.240724100067505,0,0,2.72345207987757,0,3.60354898011848,1.30905207102113,0,0,0,0,0,0,0,0.101988829741982,0,0.36757959813938,0.250707539292375,0.0757786982182394,0.803892390468535,3.31667775783512,2.89612388413307,0.639701945702943,0.476128862927481,0.904244737704086,1.11734485732544,0,0.318235791390825,0,0.870866991587845,0.342233301085281,0.740872583160463,0.0717222053926763,0.332660356546013,0.162806537221949,0,0,0.179650404213174,0,0.122241444182866,0.406896178315738,0,1.00636896795513,0.641136984606466 | |||
|short_description=p4@SEMA4D | |||
}} |
Latest revision as of 05:31, 18 September 2015
Short description: | p4@SEMA4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SEMA4D_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc004aqp.1_5end |
EntrezGene: | SEMA4D |
HGNC: | 10732 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 5.42e-10 | 8 |
natural killer cell | 1.13e-09 | 3 |
pro-NK cell | 1.13e-09 | 3 |
eosinophil | 1.66e-07 | 2 |
blood cell | 3.70e-07 | 11 |