FFCP PHASE1:Mm9::chr7:136400541..136400570,+: Difference between revisions
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{{FFCP|EntrezGene=381925|HGNC=|MCL_coexpression_id=287|UniProt=Q0VBU9|association_with_transcript=-37bp_to_ENSMUST00000094018,NM_001080963,uc009jzl.1,uc012fuv.1_5end|description=CAGE_peak_1_at_Ppapdc1a_5end|id=chr7:136400541..136400570,+|ontology_enrichment_celltype=CL:0000117!1.62e-09!23;CL:0000337!1.62e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.10e-15,23;CL:0000337,3.10e-15,23;CL:0000540,1.02e-10,33;CL:0000047,1.02e-10,33;CL:0000031,1.02e-10,33;CL:0000404,1.02e-10,33;CL:0002319,1.79e-10,43;CL:0000221,4.15e-10,44;CL:0000133,4.15e-10,44;CL:0000393,2.37e-08,39;CL:0000211,2.37e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.85e-20!73;UBERON:0005743!9.85e-20!73;UBERON:0000073!1.02e-19!75;UBERON:0001016!1.02e-19!75;UBERON:0004121!3.04e-18!102;UBERON:0000924!3.04e-18!102;UBERON:0006601!3.04e-18!102;UBERON:0001049!3.25e-17!52;UBERON:0005068!3.25e-17!52;UBERON:0006241!3.25e-17!52;UBERON:0007135!3.25e-17!52;UBERON:0000955!7.45e-16!50;UBERON:0006238!7.45e-16!50;UBERON:0002616!4.25e-15!49;UBERON:0000033!5.50e-15!63;UBERON:0002346!1.02e-14!71;UBERON:0003075!1.02e-14!71;UBERON:0007284!1.02e-14!71;UBERON:0002020!2.97e-12!34;UBERON:0003080!4.22e-11!40;UBERON:0003056!8.24e-11!49;UBERON:0002780!1.96e-10!39;UBERON:0001890!1.96e-10!39;UBERON:0006240!1.96e-10!39;UBERON:0002791!7.00e-09!29;UBERON:0003528!7.00e-09!29;UBERON:0001893!7.00e-09!29;UBERON:0003076!2.34e-07!12;UBERON:0003057!2.34e-07!12;UBERON:0002021!6.23e-07!10;UBERON:0000411!6.23e-07!10;UBERON:0001950!6.23e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.34e-34,73;UBERON:0001016,7.49e-33,75;UBERON:0004121,1.07e-29,95;UBERON:0000924,1.07e-29,95;UBERON:0006601,1.07e-29,95;UBERON:0000073,3.58e-29,54;UBERON:0001049,2.20e-26,52;UBERON:0005068,2.20e-26,52;UBERON:0006241,2.20e-26,52;UBERON:0007135,2.20e-26,52;UBERON:0010371,1.68e-23,73;UBERON:0002346,9.28e-23,64;UBERON:0003075,9.28e-23,64;UBERON:0007284,9.28e-23,64;UBERON:0002020,2.60e-20,34;UBERON:0000955,4.55e-20,47;UBERON:0006238,4.55e-20,47;UBERON:0002616,9.11e-19,46;UBERON:0003080,1.71e-15,40;UBERON:0010314,6.97e-15,92;UBERON:0002780,2.59e-14,39;UBERON:0001890,2.59e-14,39;UBERON:0006240,2.59e-14,39;UBERON:0003056,4.13e-14,49;UBERON:0003528,6.15e-14,29;UBERON:0002791,6.15e-14,29;UBERON:0001893,6.15e-14,29;UBERON:0003076,1.75e-12,12;UBERON:0003057,1.75e-12,12;UBERON:0002021,2.45e-10,10;UBERON:0000411,2.45e-10,10;UBERON:0001950,2.45e-10,10;UBERON:0002240,2.94e-10,6;UBERON:0005174,2.94e-10,6;UBERON:0001137,2.94e-10,6;UBERON:0002420,5.92e-09,8;UBERON:0007245,5.92e-09,8;UBERON:0010009,5.92e-09,8;UBERON:0010011,5.92e-09,8;UBERON:0000454,5.92e-09,8;UBERON:0001948,6.88e-09,5;UBERON:0002315,6.88e-09,5;UBERON:0002619,5.42e-08,17;UBERON:0002950,1.11e-07,4;UBERON:0001891,1.11e-07,4;UBERON:0009616,1.11e-07,4;UBERON:0010286,1.11e-07,4;UBERON:0004111,2.20e-07,122;UBERON:0000956,2.40e-07,21;UBERON:0001869,2.40e-07,21;UBERON:0000203,2.40e-07,21;UBERON:0000025,4.57e-07,114|phase1_expression=8.32774004944929,0,0,0,0,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,2.87505128729943,0,0,0,0,0,0,3.84401275633236,3.70293685490423,3.80298842103708,0,0,0,0,0.7104801149461,2.69640099466564,4.61061966385865,0,0,0,12.8542942981712,9.93908434282261,0.61245399607477,0.575072826109418,0,9.91042928994498,5.87361755191863,6.75868746327471,2.1101806036831,2.19570344645783,0.52091337055676,8.93385596804419,11.2552522006336,6.72312290217964,7.66034322231536,11.10499110233,2.05039390407831,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,1.04091196059682,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,1.46390398505774,3.35114730901528,0,0,0,0,9.73639156131348,2.74500361691176,1.88481528169297,3.47648640384553,4.60287823194595,3.53239675751252,5.353961681236,0.611036183101898,0,0,13.6787206326208,0.130120442962704,0,0.180062129805349,0,0.204109497453984,0,0.281105173679186,1.29351685369508,0,0,0.879755620819744,0.876782929710299,0,0,0,0,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0,0,0,0.350296027101508,0,0,0,0,0.219550115291051,0,3.15434922846191,1.02904612379284,0,0.793351699990633,0,0.464473343720877,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0.569003702859245,1.37098215131675,1.1270773567308,1.22190796707189,0.969762435838129,0.420814919341911,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.325929952884052,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0,0.221464689648775,0,0,0,0,0,0,10.3270497333998,6.89841865761831,5.9403718295483,12.3072270921813,0,0,0,0,0.215423397732799,0,0,0,0,0,0,11.2462460747632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0.18006109403131,0,0,0.709360934569094,0.178368817602071,0.658196082408484,1.2178597964584,0,0,0.220528398054962,0.49465875882444,0,0.120625849856312,0.119372344003136,0,0,5.56275906031529,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0.432021363287205,0.418176592028937,0,0.539457385539283,0.578574190077352,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0.2604087696879,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,2.31827512838629,0,0,0.214368379079066,0,2.25900737046827,4.60325236507177,3.43737308063638,5.84300819968538,0.685082519770642,3.0215755895588,2.70009000092722,1.80128481289688,1.35942722695261,1.03552062350364,0.207574695168353,0.399024873401031,0.512200817262403,0.486213434136588,0,0.735374033800057,0.888986911206461,0.618105171716683,0.962757628775446,1.26348605881899,1.01391719956096,0.188626341386076,0.468207537349412,0.576226371643824,0.574354689556133,0.476293691283074,0.927074607558844,1.35036454324594,0.824171801606613,0.735994600671987,0.685738504770831,0.354951612318675,0.476872379894642,0.581385666529314,0.941093804153306,0.338458431566706,0.914639864363863,0.789209134313529,0.407412341537585,1.12228454331548,1.06771516311757,0.29551344712669,0.409231043169689,0.154936841185966,0.964533054905707,0.749431733813838,0.701794825336225,1.50409737833809,0.765153328275374,0.882365676478062,0.927471342481686|short_description=p1@Ppapdc1a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=381925 | |||
|HGNC= | |||
|MCL_coexpression_id=287 | |||
|TSSclassifier=NA | |||
|UniProt=Q0VBU9 | |||
|association_with_transcript=-37bp_to_ENSMUST00000094018,NM_001080963,uc009jzl.1,uc012fuv.1_5end | |||
|cluster_id=chr7:136400541..136400570,+ | |||
|description=CAGE_peak_1_at_Ppapdc1a_5end | |||
|id=chr7:136400541..136400570,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.62e-09!23;CL:0000337!1.62e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.10e-15,23;CL:0000337,3.10e-15,23;CL:0000540,1.02e-10,33;CL:0000047,1.02e-10,33;CL:0000031,1.02e-10,33;CL:0000404,1.02e-10,33;CL:0002319,1.79e-10,43;CL:0000221,4.15e-10,44;CL:0000133,4.15e-10,44;CL:0000393,2.37e-08,39;CL:0000211,2.37e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.85e-20!73;UBERON:0005743!9.85e-20!73;UBERON:0000073!1.02e-19!75;UBERON:0001016!1.02e-19!75;UBERON:0004121!3.04e-18!102;UBERON:0000924!3.04e-18!102;UBERON:0006601!3.04e-18!102;UBERON:0001049!3.25e-17!52;UBERON:0005068!3.25e-17!52;UBERON:0006241!3.25e-17!52;UBERON:0007135!3.25e-17!52;UBERON:0000955!7.45e-16!50;UBERON:0006238!7.45e-16!50;UBERON:0002616!4.25e-15!49;UBERON:0000033!5.50e-15!63;UBERON:0002346!1.02e-14!71;UBERON:0003075!1.02e-14!71;UBERON:0007284!1.02e-14!71;UBERON:0002020!2.97e-12!34;UBERON:0003080!4.22e-11!40;UBERON:0003056!8.24e-11!49;UBERON:0002780!1.96e-10!39;UBERON:0001890!1.96e-10!39;UBERON:0006240!1.96e-10!39;UBERON:0002791!7.00e-09!29;UBERON:0003528!7.00e-09!29;UBERON:0001893!7.00e-09!29;UBERON:0003076!2.34e-07!12;UBERON:0003057!2.34e-07!12;UBERON:0002021!6.23e-07!10;UBERON:0000411!6.23e-07!10;UBERON:0001950!6.23e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.34e-34,73;UBERON:0001016,7.49e-33,75;UBERON:0004121,1.07e-29,95;UBERON:0000924,1.07e-29,95;UBERON:0006601,1.07e-29,95;UBERON:0000073,3.58e-29,54;UBERON:0001049,2.20e-26,52;UBERON:0005068,2.20e-26,52;UBERON:0006241,2.20e-26,52;UBERON:0007135,2.20e-26,52;UBERON:0010371,1.68e-23,73;UBERON:0002346,9.28e-23,64;UBERON:0003075,9.28e-23,64;UBERON:0007284,9.28e-23,64;UBERON:0002020,2.60e-20,34;UBERON:0000955,4.55e-20,47;UBERON:0006238,4.55e-20,47;UBERON:0002616,9.11e-19,46;UBERON:0003080,1.71e-15,40;UBERON:0010314,6.97e-15,92;UBERON:0002780,2.59e-14,39;UBERON:0001890,2.59e-14,39;UBERON:0006240,2.59e-14,39;UBERON:0003056,4.13e-14,49;UBERON:0003528,6.15e-14,29;UBERON:0002791,6.15e-14,29;UBERON:0001893,6.15e-14,29;UBERON:0003076,1.75e-12,12;UBERON:0003057,1.75e-12,12;UBERON:0002021,2.45e-10,10;UBERON:0000411,2.45e-10,10;UBERON:0001950,2.45e-10,10;UBERON:0002240,2.94e-10,6;UBERON:0005174,2.94e-10,6;UBERON:0001137,2.94e-10,6;UBERON:0002420,5.92e-09,8;UBERON:0007245,5.92e-09,8;UBERON:0010009,5.92e-09,8;UBERON:0010011,5.92e-09,8;UBERON:0000454,5.92e-09,8;UBERON:0001948,6.88e-09,5;UBERON:0002315,6.88e-09,5;UBERON:0002619,5.42e-08,17;UBERON:0002950,1.11e-07,4;UBERON:0001891,1.11e-07,4;UBERON:0009616,1.11e-07,4;UBERON:0010286,1.11e-07,4;UBERON:0004111,2.20e-07,122;UBERON:0000956,2.40e-07,21;UBERON:0001869,2.40e-07,21;UBERON:0000203,2.40e-07,21;UBERON:0000025,4.57e-07,114 | |||
|phase1_expression=8.32774004944929,0,0,0,0,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,2.87505128729943,0,0,0,0,0,0,3.84401275633236,3.70293685490423,3.80298842103708,0,0,0,0,0.7104801149461,2.69640099466564,4.61061966385865,0,0,0,12.8542942981712,9.93908434282261,0.61245399607477,0.575072826109418,0,9.91042928994498,5.87361755191863,6.75868746327471,2.1101806036831,2.19570344645783,0.52091337055676,8.93385596804419,11.2552522006336,6.72312290217964,7.66034322231536,11.10499110233,2.05039390407831,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,1.04091196059682,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,1.46390398505774,3.35114730901528,0,0,0,0,9.73639156131348,2.74500361691176,1.88481528169297,3.47648640384553,4.60287823194595,3.53239675751252,5.353961681236,0.611036183101898,0,0,13.6787206326208,0.130120442962704,0,0.180062129805349,0,0.204109497453984,0,0.281105173679186,1.29351685369508,0,0,0.879755620819744,0.876782929710299,0,0,0,0,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0,0,0,0.350296027101508,0,0,0,0,0.219550115291051,0,3.15434922846191,1.02904612379284,0,0.793351699990633,0,0.464473343720877,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0.569003702859245,1.37098215131675,1.1270773567308,1.22190796707189,0.969762435838129,0.420814919341911,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.325929952884052,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0,0.221464689648775,0,0,0,0,0,0,10.3270497333998,6.89841865761831,5.9403718295483,12.3072270921813,0,0,0,0,0.215423397732799,0,0,0,0,0,0,11.2462460747632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0.18006109403131,0,0,0.709360934569094,0.178368817602071,0.658196082408484,1.2178597964584,0,0,0.220528398054962,0.49465875882444,0,0.120625849856312,0.119372344003136,0,0,5.56275906031529,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0.432021363287205,0.418176592028937,0,0.539457385539283,0.578574190077352,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0.2604087696879,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,2.31827512838629,0,0,0.214368379079066,0,2.25900737046827,4.60325236507177,3.43737308063638,5.84300819968538,0.685082519770642,3.0215755895588,2.70009000092722,1.80128481289688,1.35942722695261,1.03552062350364,0.207574695168353,0.399024873401031,0.512200817262403,0.486213434136588,0,0.735374033800057,0.888986911206461,0.618105171716683,0.962757628775446,1.26348605881899,1.01391719956096,0.188626341386076,0.468207537349412,0.576226371643824,0.574354689556133,0.476293691283074,0.927074607558844,1.35036454324594,0.824171801606613,0.735994600671987,0.685738504770831,0.354951612318675,0.476872379894642,0.581385666529314,0.941093804153306,0.338458431566706,0.914639864363863,0.789209134313529,0.407412341537585,1.12228454331548,1.06771516311757,0.29551344712669,0.409231043169689,0.154936841185966,0.964533054905707,0.749431733813838,0.701794825336225,1.50409737833809,0.765153328275374,0.882365676478062,0.927471342481686 | |||
|short_description=p1@Ppapdc1a | |||
}} |
Latest revision as of 00:08, 26 September 2015
Short description: | p1@Ppapdc1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ppapdc1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:287 |
Association with transcript: | -37bp_to_ENSMUST00000094018, NM_001080963, uc009jzl.1, uc012fuv.1_5end |
EntrezGene: | Ppapdc1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.10e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.10e-15 | 23 |
neuron | 1.02e-10 | 33 |
neuronal stem cell | 1.02e-10 | 33 |
neuroblast | 1.02e-10 | 33 |
electrically signaling cell | 1.02e-10 | 33 |
neural cell | 1.79e-10 | 43 |
ectodermal cell | 4.15e-10 | 44 |
neurectodermal cell | 4.15e-10 | 44 |
electrically responsive cell | 2.37e-08 | 39 |
electrically active cell | 2.37e-08 | 39 |