FFCP PHASE1:Mm9::chr16:45724662..45724673,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:45724662..45724673,-
|short_description=p6@Tagln3
|description=CAGE_peak_6_at_Tagln3_5end
|association_with_transcript=-18bp_to_NM_019754,uc007ziw.1_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=56370 | |EntrezGene=56370 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q9R1Q8 | |UniProt=Q9R1Q8 | ||
|association_with_transcript=-18bp_to_NM_019754,uc007ziw.1_5end | |||
|cluster_id=chr16:45724662..45724673,- | |||
|description=CAGE_peak_6_at_Tagln3_5end | |||
|id=chr16:45724662..45724673,- | |||
|ontology_enrichment_celltype=CL:0000117!1.08e-23!23;CL:0000337!1.08e-23!23;CL:0000540!7.64e-20!33;CL:0000047!7.64e-20!33;CL:0000031!7.64e-20!33;CL:0000404!7.64e-20!33;CL:0002319!2.36e-16!43;CL:0000221!9.24e-16!44;CL:0000133!9.24e-16!44;CL:0000393!2.18e-15!39;CL:0000211!2.18e-15!39;CL:0000055!9.92e-13!50;CL:0002609!9.41e-09!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.36e-44,23;CL:0000337,7.36e-44,23;CL:0000540,1.83e-29,33;CL:0000047,1.83e-29,33;CL:0000031,1.83e-29,33;CL:0000404,1.83e-29,33;CL:0000393,2.31e-24,39;CL:0000211,2.31e-24,39;CL:0002319,9.41e-22,43;CL:0000221,3.57e-21,44;CL:0000133,3.57e-21,44;CL:0002609,1.33e-20,6;CL:0002321,6.29e-12,70;CL:0000120,7.11e-11,3;CL:0002608,7.11e-11,3;CL:0002613,9.60e-11,3;CL:0002612,2.91e-10,3;CL:0000723,2.55e-08,91;CL:0000048,2.55e-08,91;CL:0000034,1.41e-07,97;CL:0002611,4.37e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.15e-30!73;UBERON:0005743!8.15e-30!73;UBERON:0000073!1.03e-29!75;UBERON:0001016!1.03e-29!75;UBERON:0002020!1.16e-26!34;UBERON:0001049!8.91e-26!52;UBERON:0005068!8.91e-26!52;UBERON:0006241!8.91e-26!52;UBERON:0007135!8.91e-26!52;UBERON:0002346!1.02e-25!71;UBERON:0003075!1.02e-25!71;UBERON:0007284!1.02e-25!71;UBERON:0004121!1.31e-24!102;UBERON:0000924!1.31e-24!102;UBERON:0006601!1.31e-24!102;UBERON:0000033!8.74e-23!63;UBERON:0000955!1.03e-21!50;UBERON:0006238!1.03e-21!50;UBERON:0003056!2.66e-21!49;UBERON:0002791!4.44e-21!29;UBERON:0003528!4.44e-21!29;UBERON:0001893!4.44e-21!29;UBERON:0002616!8.70e-21!49;UBERON:0003080!6.17e-18!40;UBERON:0002780!2.58e-17!39;UBERON:0001890!2.58e-17!39;UBERON:0006240!2.58e-17!39;UBERON:0000956!2.97e-15!21;UBERON:0001869!2.97e-15!21;UBERON:0000203!2.97e-15!21;UBERON:0007811!4.37e-13!86;UBERON:0002619!5.87e-11!17;UBERON:0000153!6.79e-11!94;UBERON:0003076!1.79e-08!12;UBERON:0003057!1.79e-08!12;UBERON:0002021!5.05e-08!10;UBERON:0000411!5.05e-08!10;UBERON:0001950!5.05e-08!10;UBERON:0002240!2.93e-07!6;UBERON:0005174!2.93e-07!6;UBERON:0001137!2.93e-07!6;UBERON:0002420!5.55e-07!8;UBERON:0007245!5.55e-07!8;UBERON:0010009!5.55e-07!8;UBERON:0010011!5.55e-07!8;UBERON:0000454!5.55e-07!8;UBERON:0001948!6.68e-07!5;UBERON:0002315!6.68e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.42e-31,34;UBERON:0002346,8.91e-25,64;UBERON:0003075,8.91e-25,64;UBERON:0007284,8.91e-25,64;UBERON:0001049,1.26e-23,52;UBERON:0005068,1.26e-23,52;UBERON:0006241,1.26e-23,52;UBERON:0007135,1.26e-23,52;UBERON:0000073,1.35e-22,54;UBERON:0001017,1.53e-21,73;UBERON:0010371,3.60e-21,73;UBERON:0001016,7.56e-21,75;UBERON:0004121,1.79e-20,95;UBERON:0000924,1.79e-20,95;UBERON:0006601,1.79e-20,95;UBERON:0003528,7.04e-20,29;UBERON:0002791,7.04e-20,29;UBERON:0001893,7.04e-20,29;UBERON:0003056,4.67e-18,49;UBERON:0002780,3.91e-16,39;UBERON:0001890,3.91e-16,39;UBERON:0006240,3.91e-16,39;UBERON:0010314,7.32e-16,92;UBERON:0001948,1.03e-15,5;UBERON:0002315,1.03e-15,5;UBERON:0003080,1.18e-15,40;UBERON:0002616,4.29e-15,46;UBERON:0000955,1.05e-14,47;UBERON:0006238,1.05e-14,47;UBERON:0000956,3.38e-14,21;UBERON:0001869,3.38e-14,21;UBERON:0000203,3.38e-14,21;UBERON:0002240,4.61e-13,6;UBERON:0005174,4.61e-13,6;UBERON:0001137,4.61e-13,6;UBERON:0002257,2.91e-10,3;UBERON:0003076,7.30e-09,12;UBERON:0003057,7.30e-09,12;UBERON:0002619,1.59e-08,17;UBERON:0000025,1.70e-08,114;UBERON:0001954,5.46e-08,7;UBERON:0003022,5.46e-08,7;UBERON:0002421,5.46e-08,7;UBERON:0000349,5.46e-08,7;UBERON:0002600,5.46e-08,7;UBERON:0004111,1.16e-07,122;UBERON:0002256,4.37e-07,2;UBERON:0002420,7.24e-07,8;UBERON:0007245,7.24e-07,8;UBERON:0010009,7.24e-07,8;UBERON:0010011,7.24e-07,8;UBERON:0000454,7.24e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,3.84401275633236,1.5869729378161,2.53532561402472,0,0,0,0,0,0,0.384218305321555,4.87341177849845,2.8351247049655,2.94454945891935,1.14260393761521,1.54607978666129,1.95985278743926,2.77951865952885,2.75765635983006,0,0.383062014255563,0.46081959976873,3.16527090552465,2.47016637726506,1.56274011167028,0.279182999001381,1.68828783009504,0.61119299110724,1.47314292736834,1.13897344639282,3.35519002485541,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,1.04723353406728,0,0,0,0,0.299581278809645,0,0.502617408451458,0.521472960576829,0.511430914660661,1.0389402227978,0.324482526135515,0,0,0,0,0,1.60931473103431,0.720248519221397,1.35634336052144,0.476255494059295,0.512454881139399,1.03071897015702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,2.57261530948211,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.703270119553219,0,0,0,0.390438744296638,0.430846795465598,0,0,0,0.404810701674894,0.292255857911312,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,1.14579102687879,0.515559547031063,0.685082519770642,1.5107877947794,0,0.45032120322422,0.453142408984205,0.51776031175182,0.207574695168353,1.19707462020309,0.682934423016537,0.243106717068294,0.838452650511929,0.183843508450014,0,0,0.64183841918363,0,0,0,0.468207537349412,0.128050304809739,0.229741875822453,0.476293691283074,0.115884325944855,0.578727661391115,0,0,0.342869252385415,0,0.238436189947321,0.436039249896986,0.188218760830661,0.338458431566706,0.365855945745545,0,0.271608227691724,0,0.237270036248348,0,0.409231043169689,0,0,0.499621155875892,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,3.84401275633236,1.5869729378161,2.53532561402472,0,0,0,0,0,0,0.384218305321555,4.87341177849845,2.8351247049655,2.94454945891935,1.14260393761521,1.54607978666129,1.95985278743926,2.77951865952885,2.75765635983006,0,0.383062014255563,0.46081959976873,3.16527090552465,2.47016637726506,1.56274011167028,0.279182999001381,1.68828783009504,0.61119299110724,1.47314292736834,1.13897344639282,3.35519002485541,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,1.04723353406728,0,0,0,0,0.299581278809645,0,0.502617408451458,0.521472960576829,0.511430914660661,1.0389402227978,0.324482526135515,0,0,0,0,0,1.60931473103431,0.720248519221397,1.35634336052144,0.476255494059295,0.512454881139399,1.03071897015702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,2.57261530948211,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.703270119553219,0,0,0,0.390438744296638,0.430846795465598,0,0,0,0.404810701674894,0.292255857911312,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,1.14579102687879,0.515559547031063,0.685082519770642,1.5107877947794,0,0.45032120322422,0.453142408984205,0.51776031175182,0.207574695168353,1.19707462020309,0.682934423016537,0.243106717068294,0.838452650511929,0.183843508450014,0,0,0.64183841918363,0,0,0,0.468207537349412,0.128050304809739,0.229741875822453,0.476293691283074,0.115884325944855,0.578727661391115,0,0,0.342869252385415,0,0.238436189947321,0.436039249896986,0.188218760830661,0.338458431566706,0.365855945745545,0,0.271608227691724,0,0.237270036248348,0,0.409231043169689,0,0,0.499621155875892,0,0,0,0,0 | ||
|short_description=p6@Tagln3 | |||
}} | }} |
Latest revision as of 14:23, 25 September 2015
Short description: | p6@Tagln3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Tagln3_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -18bp_to_NM_019754, uc007ziw.1_5end |
EntrezGene: | Tagln3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.36e-44 | 23 |
neuroblast (sensu Vertebrata) | 7.36e-44 | 23 |
neuron | 1.83e-29 | 33 |
neuronal stem cell | 1.83e-29 | 33 |
neuroblast | 1.83e-29 | 33 |
electrically signaling cell | 1.83e-29 | 33 |
electrically responsive cell | 2.31e-24 | 39 |
electrically active cell | 2.31e-24 | 39 |
neural cell | 9.41e-22 | 43 |
ectodermal cell | 3.57e-21 | 44 |
neurectodermal cell | 3.57e-21 | 44 |
neuron of cerebral cortex | 1.33e-20 | 6 |
embryonic cell | 6.29e-12 | 70 |
granule cell | 7.11e-11 | 3 |
hippocampal neuron | 7.11e-11 | 3 |
striatum neuron | 9.60e-11 | 3 |
neuron of the ventral spinal cord | 2.91e-10 | 3 |
somatic stem cell | 2.55e-08 | 91 |
multi fate stem cell | 2.55e-08 | 91 |
stem cell | 1.41e-07 | 97 |
neuron of the dorsal spinal cord | 4.37e-07 | 2 |