Personal tools

FFCP PHASE1:Mm9::chr9:108710671..108710682,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr9:108710671..108710682,+ |short_description=p2@Nckipsd |description=CAGE_peak_2_at_Nckipsd_5end |association_with_transcript=-28bp_to_NM_030729,uc009rqz.1_5e...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr9:108710671..108710682,+
|DHSsupport=NA
|short_description=p2@Nckipsd
|DPIdataset=NA
|description=CAGE_peak_2_at_Nckipsd_5end
|association_with_transcript=-28bp_to_NM_030729,uc009rqz.1_5end
|EntrezGene=80987
|EntrezGene=80987
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9ESJ4
|UniProt=Q9ESJ4
|association_with_transcript=-28bp_to_NM_030729,uc009rqz.1_5end
|cluster_id=chr9:108710671..108710682,+
|description=CAGE_peak_2_at_Nckipsd_5end
|id=chr9:108710671..108710682,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002610,2.34e-09,3;CL:0002614,2.34e-09,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.48e-17!52;UBERON:0005068!2.48e-17!52;UBERON:0006241!2.48e-17!52;UBERON:0007135!2.48e-17!52;UBERON:0000955!5.46e-17!50;UBERON:0006238!5.46e-17!50;UBERON:0002616!2.02e-16!49;UBERON:0002346!5.01e-16!71;UBERON:0003075!5.01e-16!71;UBERON:0007284!5.01e-16!71;UBERON:0000033!2.27e-14!63;UBERON:0000073!6.43e-14!75;UBERON:0001016!6.43e-14!75;UBERON:0001017!1.15e-13!73;UBERON:0005743!1.15e-13!73;UBERON:0004121!1.15e-12!102;UBERON:0000924!1.15e-12!102;UBERON:0006601!1.15e-12!102;UBERON:0002020!1.73e-11!34;UBERON:0003080!3.78e-11!40;UBERON:0003056!5.09e-11!49;UBERON:0002780!1.49e-10!39;UBERON:0001890!1.49e-10!39;UBERON:0006240!1.49e-10!39;UBERON:0000153!4.35e-10!94;UBERON:0002791!1.67e-09!29;UBERON:0003528!1.67e-09!29;UBERON:0001893!1.67e-09!29;UBERON:0007811!9.63e-09!86;UBERON:0002021!6.13e-08!10;UBERON:0000411!6.13e-08!10;UBERON:0001950!6.13e-08!10;UBERON:0003076!1.97e-07!12;UBERON:0003057!1.97e-07!12;UBERON:0000956!2.23e-07!21;UBERON:0001869!2.23e-07!21;UBERON:0000203!2.23e-07!21;UBERON:0002619!3.16e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.83e-34,54;UBERON:0001049,4.62e-30,52;UBERON:0005068,4.62e-30,52;UBERON:0006241,4.62e-30,52;UBERON:0007135,4.62e-30,52;UBERON:0002616,7.87e-29,46;UBERON:0000955,4.11e-28,47;UBERON:0006238,4.11e-28,47;UBERON:0001017,4.73e-26,73;UBERON:0002346,1.70e-25,64;UBERON:0003075,1.70e-25,64;UBERON:0007284,1.70e-25,64;UBERON:0001016,3.28e-25,75;UBERON:0003080,2.92e-22,40;UBERON:0002021,3.34e-22,10;UBERON:0000411,3.34e-22,10;UBERON:0001950,3.34e-22,10;UBERON:0010371,1.07e-21,73;UBERON:0002780,2.35e-20,39;UBERON:0001890,2.35e-20,39;UBERON:0006240,2.35e-20,39;UBERON:0004121,2.70e-20,95;UBERON:0000924,2.70e-20,95;UBERON:0006601,2.70e-20,95;UBERON:0003528,1.35e-19,29;UBERON:0002791,1.35e-19,29;UBERON:0001893,1.35e-19,29;UBERON:0003056,2.33e-19,49;UBERON:0002020,1.81e-18,34;UBERON:0010314,1.37e-17,92;UBERON:0002619,1.56e-15,17;UBERON:0000956,5.82e-15,21;UBERON:0001869,5.82e-15,21;UBERON:0000203,5.82e-15,21;UBERON:0002950,6.11e-12,4;UBERON:0001891,6.11e-12,4;UBERON:0009616,6.11e-12,4;UBERON:0010286,6.11e-12,4;UBERON:0000025,7.33e-11,114;UBERON:0004111,8.39e-10,122;UBERON:0002038,2.34e-09,3;UBERON:0009663,2.34e-09,3;UBERON:0009661,2.34e-09,3;UBERON:0000125,2.34e-09,3;UBERON:0002308,2.34e-09,3;UBERON:0004684,2.34e-09,3;UBERON:0002275,2.34e-09,3;UBERON:0007023,2.78e-08,51;UBERON:0003076,3.78e-08,12;UBERON:0003057,3.78e-08,12;UBERON:0004733,6.21e-08,6;UBERON:0004732,6.21e-08,6;UBERON:0002028,6.21e-08,6;UBERON:0007277,6.21e-08,6;UBERON:0001896,2.94e-07,2;UBERON:0002298,2.94e-07,2;UBERON:0005290,2.94e-07,2;UBERON:0010096,2.94e-07,2
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0.342401459862411,0.174840804837995,0.333109761815663,0.202475267389826,0,0.315462165358238,0,0,0.680346321208558,0.0992909512008853,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.183546752161682,1.56478268869608,0.436050312760893,0,0.194429899074283,0.139986421625363,0,0,0,0.336093799142464,0,0.286533439938757,0,0.809265843438391,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,0.311068836925433,0.405017814995072,0,0.856952953211411,1.10434270475807,0.122490799214954,0.191690942036473,0.919218786610021,2.20231761998777,3.31987079021488,3.07213066512487,0.263772575460388,0.457438218012048,0,2.79182999001381,3.93933827022176,1.83357897332172,0.589257170947335,0.284743361598206,0.745597783301202,0.151452386666368,0.529000920747499,0,0.860423876981386,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0,0.517875767294343,1.33597925158342,0.173485326766136,0.304465478312141,0.230615497256059,0,0.23517741427141,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0.441683036920787,0,0,2.04946557908083,0.83778682725382,0,0,0,0.127070227073065,2.99581278809645,1.83000241127451,0.376963056338593,3.65031072403781,1.53429274398198,3.53239675751252,2.10913641988085,0.407357455401265,0.248813941220186,0.758168275301024,1.05220927943237,0.130120442962704,0.229902104433473,0.360124259610698,0.150704817835715,0.340182495756639,0.12811372028485,0.0937017245597288,0.258703370739016,0.431135985865684,0.378212160335639,0,0.657587197282725,0.278047249225598,1.0447564995665,0.205782136407943,0.398068533636986,0.702213187313235,0.257347907114715,0.284163499395593,0,0,0,0,0,0.308534225774757,0,0,0.233530684734339,0,0.164167464079095,0.243206428637567,0.292399974850665,0,0.134206418760372,4.6263788684108,0.720332286654991,0,0,0,0.232236671860439,0.515469845288373,0.403367049246685,0,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0,0,0.216138049874694,0,0,0.228497025219458,0,0.407302655690628,0,0.210407459670956,0.126473074248515,0,0.31399745568275,0.246794327843601,0.296452627087149,0.166845105716094,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0.325929952884052,0,0.234690248288502,0,0.238043640886014,0.390267295715598,0.315270288212382,0.221464689648775,0,0,0.345369963731791,0,0,0,0,0.275936746304732,4.65596710964597,3.39913891117389,0.491804836130026,0.504941854408746,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0,0,0,0.963963949265421,0.141940085208269,0,0.325773918707152,0.494910368917606,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,1.36175842301515,0,0.129358683782755,0.428674070063185,0,0.356737635204141,0.822745103010605,0.304464949114599,0,0.63549621259146,0.220528398054962,0.32977250588296,0,0.422190474497091,0,0.328281799490123,0,4.82105785227325,0,0,0,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,0,0.158167996790568,0,0.216010681643603,0.418176592028937,0.218362563746178,0,0.330613822901344,0.523511883968059,0.259229946583586,0,0,0.448549638131936,0.66183396182839,0.388902376688095,0.387479470433193,0.675824501963113,0.58678619322877,0.39061315453185,0.629156066554265,0,0,0,0,0.308132871494482,0,0.179026695667481,0.39736270956253,0.120195449519969,0.443068581523732,0,0.15241361331,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0.221985953374065,0.179427713218951,0.335769232728157,0.386379188064381,0,0.183151624267265,0.214368379079066,0.501572104035363,1.12950368523413,0.920650473014354,2.29158205375759,2.06223818812425,2.74033007908257,3.7769694869485,3.37511250115903,4.95353323546643,2.71885445390523,3.10656187051092,0.31136204275253,0.399024873401031,0.341467211508268,0,0.209613162627982,0.183843508450014,0.666740183404846,0.206035057238894,0.320919209591815,0,0.25347929989024,0.377252682772152,0.280924522409647,0.448176066834085,0.229741875822453,0.476293691283074,0.231768651889711,0.38581844092741,0,0.147198920134397,0.685738504770831,0,0,0.436039249896986,0,0.169229215783353,0.365855945745545,0,0.135804113845862,0.561142271657738,0.474540072496697,0.197008964751127,0,0.154936841185966,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0.342401459862411,0.174840804837995,0.333109761815663,0.202475267389826,0,0.315462165358238,0,0,0.680346321208558,0.0992909512008853,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.183546752161682,1.56478268869608,0.436050312760893,0,0.194429899074283,0.139986421625363,0,0,0,0.336093799142464,0,0.286533439938757,0,0.809265843438391,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,0.311068836925433,0.405017814995072,0,0.856952953211411,1.10434270475807,0.122490799214954,0.191690942036473,0.919218786610021,2.20231761998777,3.31987079021488,3.07213066512487,0.263772575460388,0.457438218012048,0,2.79182999001381,3.93933827022176,1.83357897332172,0.589257170947335,0.284743361598206,0.745597783301202,0.151452386666368,0.529000920747499,0,0.860423876981386,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0,0.517875767294343,1.33597925158342,0.173485326766136,0.304465478312141,0.230615497256059,0,0.23517741427141,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0.441683036920787,0,0,2.04946557908083,0.83778682725382,0,0,0,0.127070227073065,2.99581278809645,1.83000241127451,0.376963056338593,3.65031072403781,1.53429274398198,3.53239675751252,2.10913641988085,0.407357455401265,0.248813941220186,0.758168275301024,1.05220927943237,0.130120442962704,0.229902104433473,0.360124259610698,0.150704817835715,0.340182495756639,0.12811372028485,0.0937017245597288,0.258703370739016,0.431135985865684,0.378212160335639,0,0.657587197282725,0.278047249225598,1.0447564995665,0.205782136407943,0.398068533636986,0.702213187313235,0.257347907114715,0.284163499395593,0,0,0,0,0,0.308534225774757,0,0,0.233530684734339,0,0.164167464079095,0.243206428637567,0.292399974850665,0,0.134206418760372,4.6263788684108,0.720332286654991,0,0,0,0.232236671860439,0.515469845288373,0.403367049246685,0,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0,0,0.216138049874694,0,0,0.228497025219458,0,0.407302655690628,0,0.210407459670956,0.126473074248515,0,0.31399745568275,0.246794327843601,0.296452627087149,0.166845105716094,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0.325929952884052,0,0.234690248288502,0,0.238043640886014,0.390267295715598,0.315270288212382,0.221464689648775,0,0,0.345369963731791,0,0,0,0,0.275936746304732,4.65596710964597,3.39913891117389,0.491804836130026,0.504941854408746,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0,0,0,0.963963949265421,0.141940085208269,0,0.325773918707152,0.494910368917606,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,1.36175842301515,0,0.129358683782755,0.428674070063185,0,0.356737635204141,0.822745103010605,0.304464949114599,0,0.63549621259146,0.220528398054962,0.32977250588296,0,0.422190474497091,0,0.328281799490123,0,4.82105785227325,0,0,0,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,0,0.158167996790568,0,0.216010681643603,0.418176592028937,0.218362563746178,0,0.330613822901344,0.523511883968059,0.259229946583586,0,0,0.448549638131936,0.66183396182839,0.388902376688095,0.387479470433193,0.675824501963113,0.58678619322877,0.39061315453185,0.629156066554265,0,0,0,0,0.308132871494482,0,0.179026695667481,0.39736270956253,0.120195449519969,0.443068581523732,0,0.15241361331,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0.221985953374065,0.179427713218951,0.335769232728157,0.386379188064381,0,0.183151624267265,0.214368379079066,0.501572104035363,1.12950368523413,0.920650473014354,2.29158205375759,2.06223818812425,2.74033007908257,3.7769694869485,3.37511250115903,4.95353323546643,2.71885445390523,3.10656187051092,0.31136204275253,0.399024873401031,0.341467211508268,0,0.209613162627982,0.183843508450014,0.666740183404846,0.206035057238894,0.320919209591815,0,0.25347929989024,0.377252682772152,0.280924522409647,0.448176066834085,0.229741875822453,0.476293691283074,0.231768651889711,0.38581844092741,0,0.147198920134397,0.685738504770831,0,0,0.436039249896986,0,0.169229215783353,0.365855945745545,0,0.135804113845862,0.561142271657738,0.474540072496697,0.197008964751127,0,0.154936841185966,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0
|short_description=p2@Nckipsd
}}
}}

Latest revision as of 04:35, 26 September 2015

Short description:p2@Nckipsd
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nckipsd_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -28bp_to_NM_030729, uc009rqz.1_5end
EntrezGene:Nckipsd
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Nckipsd

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D53.65
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C24.66
medulla oblongata, neonate N30.CNhs11200.1396-42A33.40
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron2.34e-093
neuron of the substantia nigra2.34e-093

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.83e-3454
neural tube4.62e-3052
neural rod4.62e-3052
future spinal cord4.62e-3052
neural keel4.62e-3052
regional part of brain7.87e-2946
brain4.11e-2847
future brain4.11e-2847
central nervous system4.73e-2673
neurectoderm1.70e-2564
neural plate1.70e-2564
presumptive neural plate1.70e-2564
nervous system3.28e-2575
anterior neural tube2.92e-2240
occipital lobe3.34e-2210
visual cortex3.34e-2210
neocortex3.34e-2210
ecto-epithelium1.07e-2173
regional part of forebrain2.35e-2039
forebrain2.35e-2039
future forebrain2.35e-2039
ectoderm-derived structure2.70e-2095
ectoderm2.70e-2095
presumptive ectoderm2.70e-2095
brain grey matter1.35e-1929
regional part of telencephalon1.35e-1929
telencephalon1.35e-1929
pre-chordal neural plate2.33e-1949
gray matter1.81e-1834
structure with developmental contribution from neural crest1.37e-1792
regional part of cerebral cortex1.56e-1517
cerebral cortex5.82e-1521
cerebral hemisphere5.82e-1521
pallium5.82e-1521
regional part of midbrain6.11e-124
midbrain6.11e-124
presumptive midbrain6.11e-124
midbrain neural tube6.11e-124
tube7.33e-11114
anatomical conduit8.39e-10122
substantia nigra2.34e-093
telencephalic nucleus2.34e-093
midbrain nucleus2.34e-093
neural nucleus2.34e-093
nucleus of brain2.34e-093
raphe nuclei2.34e-093
reticular formation2.34e-093
adult organism2.78e-0851
posterior neural tube3.78e-0812
chordal neural plate3.78e-0812
segmental subdivision of hindbrain6.21e-086
segmental subdivision of nervous system6.21e-086
hindbrain6.21e-086
presumptive hindbrain6.21e-086
medulla oblongata2.94e-072
brainstem2.94e-072
myelencephalon2.94e-072
future myelencephalon2.94e-072
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:108710671..108710682,%2B&oldid=4233513"