FFCP PHASE1:Hg19::chr11:18720316..18720334,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:18720316..18720334,+ to FFCP PHASE1:Hg19::chr11:18720316..18720334,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=144110 | |EntrezGene=144110 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26890 | |HGNC=26890 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000533987,ENST00000535380_5end | |||
|cluster_id=chr11:18720316..18720334,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_1_at_TMEM86A_5end | |||
|id=chr11:18720316..18720334,+ | |||
|ontology_enrichment_celltype=CL:0002009!2.93e-15!65;CL:0002194!4.54e-15!63;CL:0000576!4.54e-15!63;CL:0000040!4.54e-15!63;CL:0000559!4.54e-15!63;CL:0000557!1.03e-14!71;CL:0002057!1.77e-14!42;CL:0000839!2.59e-13!70;CL:0000860!3.70e-12!45;CL:0000766!2.41e-11!76 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.66e-18;39!CL:0000234;1.66e-18;39!CL:0000860;3.95e-17;33!CL:0002057;3.95e-17;33!CL:0000576;6.09e-12;48!CL:0000766;3.27e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.27e-21,59;CL:0000576,2.27e-21,59;CL:0000040,2.27e-21,59;CL:0000559,2.27e-21,59;CL:0000473,3.29e-21,48;CL:0000234,3.29e-21,48;CL:0002009,4.98e-21,61;CL:0000557,4.59e-19,67;CL:0000839,4.90e-18,66;CL:0000860,8.16e-17,42;CL:0002057,8.16e-17,42;CL:0000766,2.32e-15,72 | |||
|ontology_enrichment_development_v019=CL:0002057;9.71e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.11e-18!115;UBERON:0000468!8.03e-17!659;UBERON:0000922!4.68e-16!612;UBERON:0000467!5.45e-16!625;UBERON:0000480!1.17e-15!626;UBERON:0002050!3.62e-15!605;UBERON:0005423!3.62e-15!605;UBERON:0000923!7.22e-15!604;UBERON:0005291!7.22e-15!604;UBERON:0006598!7.22e-15!604;UBERON:0002532!7.22e-15!604;UBERON:0000062!9.15e-13!511;UBERON:0002371!4.62e-12!80;UBERON:0005743!1.14e-11!86;UBERON:0000073!2.70e-11!94;UBERON:0001016!2.70e-11!94;UBERON:0002193!1.64e-10!112;UBERON:0001049!2.80e-10!57;UBERON:0005068!2.80e-10!57;UBERON:0006241!2.80e-10!57;UBERON:0007135!2.80e-10!57;UBERON:0001017!3.35e-10!82;UBERON:0002405!5.18e-10!115;UBERON:0001474!5.80e-10!86;UBERON:0002390!2.51e-09!102;UBERON:0003061!2.51e-09!102;UBERON:0000955!3.84e-08!69;UBERON:0006238!3.84e-08!69;UBERON:0003080!4.78e-08!42;UBERON:0004765!9.35e-08!101;UBERON:0001434!9.35e-08!101;UBERON:0002780!1.04e-07!41;UBERON:0001890!1.04e-07!41;UBERON:0006240!1.04e-07!41;UBERON:0003081!1.05e-07!216;UBERON:0002616!2.20e-07!59;UBERON:0004121!3.63e-07!169;UBERON:0003075!5.24e-07!86;UBERON:0007284!5.24e-07!86;UBERON:0000153!5.70e-07!129;UBERON:0007811!5.70e-07!129;UBERON:0000033!6.62e-07!123;UBERON:0004111!8.83e-07!241 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.02e-18,114;UBERON:0002405,3.64e-16,93;UBERON:0002371,1.66e-15,76;UBERON:0000922,1.33e-14,592;UBERON:0005423,1.99e-14,581;UBERON:0002193,2.60e-13,108;UBERON:0001474,3.27e-13,82;UBERON:0002050,4.14e-13,564;UBERON:0002390,1.17e-12,98;UBERON:0003061,1.17e-12,98;UBERON:0004765,2.67e-12,90;UBERON:0000923,4.19e-12,560;UBERON:0010316,4.19e-12,560;UBERON:0005291,4.19e-12,560;UBERON:0006598,4.19e-12,560;UBERON:0010317,4.19e-12,560;UBERON:0002532,4.19e-12,560;UBERON:0001049,1.56e-09,56;UBERON:0005068,1.56e-09,56;UBERON:0006241,1.56e-09,56;UBERON:0007135,1.56e-09,56;UBERON:0001434,1.93e-09,100;UBERON:0001017,3.32e-09,81;UBERON:0001016,6.18e-09,89;UBERON:0010371,1.23e-08,104;UBERON:0003081,2.62e-08,203;UBERON:0000073,3.34e-08,53;UBERON:0002616,3.34e-08,53;UBERON:0003075,1.72e-07,82;UBERON:0007284,1.72e-07,82;UBERON:0000955,2.89e-07,68;UBERON:0006238,2.89e-07,68;UBERON:0002780,4.88e-07,41;UBERON:0001890,4.88e-07,41;UBERON:0003080,4.88e-07,41;UBERON:0006240,4.88e-07,41 | |||
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| ||
|short_description=p1@TMEM86A | |||
}} | }} |
Latest revision as of 03:42, 17 September 2015
Short description: | p1@TMEM86A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM86A_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 0bp_to_ENST00000533987, ENST00000535380_5end |
EntrezGene: | TMEM86A |
HGNC: | 26890 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.27e-21 | 59 |
monocyte | 2.27e-21 | 59 |
monoblast | 2.27e-21 | 59 |
promonocyte | 2.27e-21 | 59 |
defensive cell | 3.29e-21 | 48 |
phagocyte | 3.29e-21 | 48 |
macrophage dendritic cell progenitor | 4.98e-21 | 61 |
granulocyte monocyte progenitor cell | 4.59e-19 | 67 |
myeloid lineage restricted progenitor cell | 4.90e-18 | 66 |
classical monocyte | 8.16e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.16e-17 | 42 |
myeloid leukocyte | 2.32e-15 | 72 |