FFCP PHASE1:Hg19::chr12:20848316..20848349,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:20848316..20848349,+ to FFCP PHASE1:Hg19::chr12:20848316..20848349,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=53919 | |EntrezGene=53919 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13819 | |HGNC=13819 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6S4 | |UniProt=F5H6S4 | ||
|association_with_transcript=-15bp_to_ENST00000539415_5end | |||
|cluster_id=chr12:20848316..20848349,+ | |||
|coexpression_cluster_id=C1305 | |||
|description=CAGE_peak_3_at_SLCO1C1_5end | |||
|id=chr12:20848316..20848349,+ | |||
|ontology_enrichment_celltype=CL:0000047!5.05e-10!8;CL:0000540!5.72e-07!6;CL:0000031!5.72e-07!6;CL:0000404!5.72e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.96e-08;2!CL:0002575;9.54e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,6.59e-11,8;CL:0002575,9.59e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.78e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.84e-66!115;UBERON:0001017!4.37e-61!82;UBERON:0005743!6.26e-60!86;UBERON:0001049!1.48e-58!57;UBERON:0005068!1.48e-58!57;UBERON:0006241!1.48e-58!57;UBERON:0007135!1.48e-58!57;UBERON:0000073!9.12e-55!94;UBERON:0001016!9.12e-55!94;UBERON:0002616!7.66e-51!59;UBERON:0000955!4.66e-45!69;UBERON:0006238!4.66e-45!69;UBERON:0002346!1.60e-44!90;UBERON:0002780!1.05e-43!41;UBERON:0001890!1.05e-43!41;UBERON:0006240!1.05e-43!41;UBERON:0003075!6.13e-43!86;UBERON:0007284!6.13e-43!86;UBERON:0003080!2.10e-42!42;UBERON:0001893!3.79e-39!34;UBERON:0002020!9.92e-39!34;UBERON:0003528!9.92e-39!34;UBERON:0002791!6.25e-38!33;UBERON:0001869!8.27e-36!32;UBERON:0000924!8.08e-33!173;UBERON:0006601!8.08e-33!173;UBERON:0004121!2.97e-31!169;UBERON:0000153!9.91e-28!129;UBERON:0007811!9.91e-28!129;UBERON:0003056!1.01e-27!61;UBERON:0000033!4.17e-26!123;UBERON:0000956!4.53e-26!25;UBERON:0000203!4.53e-26!25;UBERON:0002619!4.74e-25!22;UBERON:0001950!3.41e-22!20;UBERON:0003076!1.18e-16!15;UBERON:0003057!1.18e-16!15;UBERON:0002420!1.40e-14!9;UBERON:0007245!1.40e-14!9;UBERON:0010009!1.40e-14!9;UBERON:0010011!1.40e-14!9;UBERON:0000454!1.40e-14!9;UBERON:0002308!2.82e-14!9;UBERON:0000125!2.82e-14!9;UBERON:0000025!1.21e-12!194;UBERON:0004733!2.15e-12!12;UBERON:0002028!2.15e-12!12;UBERON:0007277!2.15e-12!12;UBERON:0009663!6.09e-12!7;UBERON:0004732!2.99e-11!13;UBERON:0004111!3.83e-11!241;UBERON:0002298!1.88e-10!8;UBERON:0000477!5.20e-10!286;UBERON:0000064!1.08e-08!219;UBERON:0002021!1.27e-08!5;UBERON:0000349!1.27e-08!5;UBERON:0001872!1.36e-08!5;UBERON:0000475!5.38e-08!365;UBERON:0002680!1.11e-07!9;UBERON:0001895!1.11e-07!9;UBERON:0010092!1.11e-07!9;UBERON:0001871!1.87e-07!7;UBERON:0000481!2.23e-07!347;UBERON:0000922!2.25e-07!612;UBERON:0000200!2.46e-07!6;UBERON:0000483!3.38e-07!309;UBERON:0000369!4.38e-07!4;UBERON:0002435!4.38e-07!4;UBERON:0000204!4.38e-07!4;UBERON:0010082!4.38e-07!4;UBERON:0000119!5.56e-07!312;UBERON:0001896!6.47e-07!3;UBERON:0005290!6.47e-07!3;UBERON:0010096!6.47e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.11e-22;41!UBERON:0001890;8.11e-22;41!UBERON:0000073;3.74e-21;53!UBERON:0002616;3.74e-21;53!UBERON:0001893;1.53e-20;34!UBERON:0001017;2.54e-20;75!UBERON:0002791;1.74e-19;32!UBERON:0001869;1.18e-17;32!UBERON:0003528;1.92e-16;34!UBERON:0002020;1.92e-16;34!UBERON:0000955;5.84e-16;68!UBERON:0002619;7.31e-16;22!UBERON:0001950;2.41e-14;20!UBERON:0000956;9.13e-14;25!UBERON:0000203;9.13e-14;25!UBERON:0001016;9.30e-14;83!UBERON:0009663;1.77e-12;7!UBERON:0001896;2.52e-12;3!UBERON:0005290;2.52e-12;3!UBERON:0002021;4.51e-11;5!UBERON:0002420;1.24e-09;9!UBERON:0000125;1.24e-09;9!UBERON:0007245;1.24e-09;9!UBERON:0002308;1.24e-09;9!UBERON:0010009;1.24e-09;9!UBERON:0010011;1.24e-09;9!UBERON:0000454;1.24e-09;9!UBERON:0000200;1.75e-09;6!UBERON:0001875;3.96e-08;2!UBERON:0006514;3.96e-08;2!UBERON:0000341;9.54e-08;2!UBERON:0002771;9.54e-08;2!UBERON:0011216;1.66e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.72e-44,81;UBERON:0001016,2.46e-41,89;UBERON:0001049,2.29e-35,56;UBERON:0005068,2.29e-35,56;UBERON:0006241,2.29e-35,56;UBERON:0007135,2.29e-35,56;UBERON:0000073,1.05e-31,53;UBERON:0002616,1.05e-31,53;UBERON:0000955,4.55e-30,68;UBERON:0006238,4.55e-30,68;UBERON:0002780,2.88e-28,41;UBERON:0001890,2.88e-28,41;UBERON:0003080,2.88e-28,41;UBERON:0006240,2.88e-28,41;UBERON:0004121,6.97e-28,171;UBERON:0000924,6.97e-28,171;UBERON:0006601,6.97e-28,171;UBERON:0002346,3.15e-27,86;UBERON:0007023,1.82e-25,114;UBERON:0001893,1.57e-24,34;UBERON:0003075,2.67e-24,82;UBERON:0007284,2.67e-24,82;UBERON:0002791,5.49e-23,32;UBERON:0003528,1.89e-21,34;UBERON:0002020,1.89e-21,34;UBERON:0001869,6.91e-20,32;UBERON:0003056,1.14e-19,61;UBERON:0010371,2.33e-19,104;UBERON:0011216,1.17e-17,223;UBERON:0010314,1.29e-17,132;UBERON:0002619,8.99e-16,22;UBERON:0001950,2.75e-14,20;UBERON:0000956,1.09e-13,25;UBERON:0000203,1.09e-13,25;UBERON:0009663,1.49e-12,7;UBERON:0001896,2.15e-12,3;UBERON:0005290,2.15e-12,3;UBERON:0010096,2.15e-12,3;UBERON:0002021,3.97e-11,5;UBERON:0002420,1.08e-09,9;UBERON:0000125,1.08e-09,9;UBERON:0007245,1.08e-09,9;UBERON:0002308,1.08e-09,9;UBERON:0010009,1.08e-09,9;UBERON:0010011,1.08e-09,9;UBERON:0000454,1.08e-09,9;UBERON:0000200,1.97e-09,6;UBERON:0003076,2.69e-08,15;UBERON:0003057,2.69e-08,15;UBERON:0001875,4.43e-08,2;UBERON:0006514,4.43e-08,2;UBERON:0002771,8.64e-08,2;UBERON:0000341,1.97e-07,2 | |||
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|short_description=p3@SLCO1C1 | |||
}} | }} |
Latest revision as of 19:05, 17 September 2015
Short description: | p3@SLCO1C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLCO1C1_5end |
Coexpression cluster: | C1305_neuroectodermal_medulla_retina_peripheral_hippocampus_caudate_pituitary |
Association with transcript: | -15bp_to_ENST00000539415_5end |
EntrezGene: | SLCO1C1 |
HGNC: | 13819 |
UniProt: | F5H6S4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 6.59e-11 | 8 |
central nervous system pericyte | 9.59e-08 | 2 |