FFCP PHASE1:Hg19::chr13:108462824..108462827,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:108462824..108462827,- to FFCP PHASE1:Hg19::chr13:108462824..108462827,-: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:108462824..108462827,- | |||
|description=CAGE_peak_at_chr13:108462824..108462827,- | |||
|id=chr13:108462824..108462827,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000054;3.69e-07;2!CL:0000137;3.69e-07;2!CL:0000092;3.69e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,5.28e-07,2;CL:0000137,5.28e-07,2;CL:0000092,5.28e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;3.69e-07;2!DOID:200;3.69e-07;2!DOID:4236;3.69e-07;2!DOID:4305;3.69e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,2.58e-07,2;DOID:4236,2.58e-07,2;DOID:200,5.28e-07,2;DOID:4305,5.28e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.04e-30!57;UBERON:0005068!4.04e-30!57;UBERON:0006241!4.04e-30!57;UBERON:0007135!4.04e-30!57;UBERON:0000073!7.37e-26!94;UBERON:0001016!7.37e-26!94;UBERON:0002780!8.87e-26!41;UBERON:0001890!8.87e-26!41;UBERON:0006240!8.87e-26!41;UBERON:0002616!5.52e-25!59;UBERON:0003080!5.68e-25!42;UBERON:0001017!3.71e-24!82;UBERON:0000955!5.31e-24!69;UBERON:0006238!5.31e-24!69;UBERON:0005743!6.62e-24!86;UBERON:0002020!2.16e-23!34;UBERON:0003528!2.16e-23!34;UBERON:0003075!2.60e-21!86;UBERON:0007284!2.60e-21!86;UBERON:0001893!8.49e-21!34;UBERON:0001869!1.58e-20!32;UBERON:0002346!7.60e-20!90;UBERON:0002791!7.85e-20!33;UBERON:0002619!3.80e-19!22;UBERON:0003056!9.29e-19!61;UBERON:0000956!2.41e-16!25;UBERON:0000203!2.41e-16!25;UBERON:0001950!4.77e-16!20;UBERON:0000033!3.86e-13!123;UBERON:0000153!5.16e-12!129;UBERON:0007811!5.16e-12!129;UBERON:0004121!1.25e-11!169;UBERON:0007023!3.00e-11!115;UBERON:0000924!4.52e-11!173;UBERON:0006601!4.52e-11!173;UBERON:0001872!1.04e-08!5;UBERON:0002308!1.32e-08!9;UBERON:0000125!1.32e-08!9;UBERON:0000025!1.61e-07!194;UBERON:0004111!1.78e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.52e-31;22!UBERON:0000956;7.99e-28;25!UBERON:0000203;7.99e-28;25!UBERON:0001950;1.39e-26;20!UBERON:0002791;3.60e-19;32!UBERON:0001869;3.60e-19;32!UBERON:0002780;2.04e-17;41!UBERON:0001890;2.04e-17;41!UBERON:0003528;3.51e-17;34!UBERON:0002020;3.51e-17;34!UBERON:0001893;7.94e-16;34!UBERON:0001871;1.24e-15;6!UBERON:0000073;1.13e-13;53!UBERON:0002616;1.13e-13;53!UBERON:0003112;4.76e-13;1!UBERON:0011158;4.76e-13;1!UBERON:0003128;4.76e-13;1!UBERON:0001703;4.76e-13;1!UBERON:0002241;4.76e-13;1!UBERON:0002021;2.58e-10;5!UBERON:0000349;2.58e-10;5!UBERON:0000200;9.62e-09;6!UBERON:0002771;3.69e-07;2!UBERON:0001876;3.69e-07;2!UBERON:0000007;3.69e-07;2!UBERON:0001954;3.69e-07;2!UBERON:0002702;3.69e-07;2!UBERON:0003022;3.69e-07;2!UBERON:0002421;3.69e-07;2!UBERON:0002600;3.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.59e-31,22;UBERON:0000956,1.28e-27,25;UBERON:0000203,1.28e-27,25;UBERON:0001950,2.59e-26,20;UBERON:0002791,1.31e-21,32;UBERON:0001869,1.31e-21,32;UBERON:0002780,2.36e-21,41;UBERON:0001890,2.36e-21,41;UBERON:0003080,2.36e-21,41;UBERON:0006240,2.36e-21,41;UBERON:0003528,2.49e-20,34;UBERON:0002020,2.49e-20,34;UBERON:0001893,2.49e-20,34;UBERON:0000073,2.56e-20,53;UBERON:0002616,2.56e-20,53;UBERON:0001049,3.47e-19,56;UBERON:0005068,3.47e-19,56;UBERON:0006241,3.47e-19,56;UBERON:0007135,3.47e-19,56;UBERON:0000955,2.13e-15,68;UBERON:0006238,2.13e-15,68;UBERON:0001871,2.75e-15,6;UBERON:0003056,3.86e-14,61;UBERON:0001016,6.79e-14,89;UBERON:0003112,4.77e-13,1;UBERON:0011158,4.77e-13,1;UBERON:0003128,4.77e-13,1;UBERON:0001703,4.77e-13,1;UBERON:0002241,4.77e-13,1;UBERON:0004761,4.77e-13,1;UBERON:0009617,4.77e-13,1;UBERON:0001017,8.63e-13,81;UBERON:0003075,8.63e-13,82;UBERON:0007284,8.63e-13,82;UBERON:0002346,3.82e-12,86;UBERON:0002021,2.71e-10,5;UBERON:0000349,3.12e-10,5;UBERON:0010371,7.66e-10,104;UBERON:0010314,3.67e-09,132;UBERON:0000200,1.26e-08,6;UBERON:0011216,2.95e-08,223;UBERON:0000007,2.43e-07,2;UBERON:0001954,3.09e-07,2;UBERON:0003022,3.09e-07,2;UBERON:0002421,3.09e-07,2;UBERON:0002600,3.09e-07,2;UBERON:0005253,3.70e-07,2;UBERON:0002702,4.42e-07,2;UBERON:0002771,4.69e-07,2;UBERON:0001876,5.60e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368502951935304,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0.257640540045629,0,0,0,0.504867548488229,0.0920498986422993,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393373244878272,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.54907405947211,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1253553312841,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,1.73624994933292,0,0,0,1.65868889896837,0.886642856860642,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0.843992258112108,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0.234264445725339,0,0,0,0.394584402849391,0,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0.137041924646751,0.19871461170299,0.253243183823515,0,0,0,0.19980960958213,0,0,0.171594997861965,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.63444087333891,0,0.275078873194468,0.415440338029185,0,0,0.121499113316049,0,0,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0.511164065356265,0,0,0,0.387848869084652,0.66116300871345,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,1.251909307065,0,0.110929051536852,0,0.830091809617385,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5652351854352,0.300515217994437,0.761610424337591,0,0.181848659202559,0.107410557042488,0,0.796191777397232,0,0,0,0,0,0,0,0.453411851024545,0.231522474323834,0,0.358177682162975,0,0.219284049578707,0,0.38582807654183,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,1.31051565830417,0,0,0,0,0,0,0,0,0,0.128458450192919,0,1.27707087245721,0.41023272848151,1.51243017733031,0,1.45328081068666,0,0,0,0,0,1.1441462864015,0,0,0,0,0,0,0.49131575253029,0,0.0675375846183947,0.781078098613847,1.65349437200947,0.0634158101939068,0.546974809018219,0,0,0,0,0,0.336283722218824,1.82089681270989,0.91064876540519,0,0,0,0.203909198930495,0.0657727735628491,0,0,0,0.471346769748006,0,0,0,0,0,0.47404083519818,0,0,0,0,0,0,0,0.118332000730565,0.340853619036631,0.423387050190929,0,0.31020638566432,0.955538938977433,0.671132590786754,0,0.243835849964539,0,0,0,0,0,0,0.237840181555137,0,0,2.8682940277668,0.0771741581079447,0,0.470317296361523,0,0,0.392616934229891,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,2.61810414204226,0.5290268405154,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0.202117188958219,0,0.342233301085281,0,0,0,0,0,0,0.269475606319761,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368502951935304,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0.257640540045629,0,0,0,0.504867548488229,0.0920498986422993,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393373244878272,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.54907405947211,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1253553312841,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,1.73624994933292,0,0,0,1.65868889896837,0.886642856860642,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0.843992258112108,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0.234264445725339,0,0,0,0.394584402849391,0,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0.137041924646751,0.19871461170299,0.253243183823515,0,0,0,0.19980960958213,0,0,0.171594997861965,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.63444087333891,0,0.275078873194468,0.415440338029185,0,0,0.121499113316049,0,0,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0.511164065356265,0,0,0,0.387848869084652,0.66116300871345,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,1.251909307065,0,0.110929051536852,0,0.830091809617385,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5652351854352,0.300515217994437,0.761610424337591,0,0.181848659202559,0.107410557042488,0,0.796191777397232,0,0,0,0,0,0,0,0.453411851024545,0.231522474323834,0,0.358177682162975,0,0.219284049578707,0,0.38582807654183,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,1.31051565830417,0,0,0,0,0,0,0,0,0,0.128458450192919,0,1.27707087245721,0.41023272848151,1.51243017733031,0,1.45328081068666,0,0,0,0,0,1.1441462864015,0,0,0,0,0,0,0.49131575253029,0,0.0675375846183947,0.781078098613847,1.65349437200947,0.0634158101939068,0.546974809018219,0,0,0,0,0,0.336283722218824,1.82089681270989,0.91064876540519,0,0,0,0.203909198930495,0.0657727735628491,0,0,0,0.471346769748006,0,0,0,0,0,0.47404083519818,0,0,0,0,0,0,0,0.118332000730565,0.340853619036631,0.423387050190929,0,0.31020638566432,0.955538938977433,0.671132590786754,0,0.243835849964539,0,0,0,0,0,0,0.237840181555137,0,0,2.8682940277668,0.0771741581079447,0,0.470317296361523,0,0,0.392616934229891,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,2.61810414204226,0.5290268405154,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0.202117188958219,0,0.342233301085281,0,0,0,0,0,0,0.269475606319761,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr13:108462824..108462827,- | |||
}} | }} |
Latest revision as of 14:23, 24 July 2015
Short description: | p@chr13:108462824..108462827, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:108462824..108462827, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 5.28e-07 | 2 |
osteocyte | 5.28e-07 | 2 |
osteoclast | 5.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 2.58e-07 | 2 |
carcinosarcoma | 2.58e-07 | 2 |
giant cell tumor | 5.28e-07 | 2 |
bone giant cell tumor | 5.28e-07 | 2 |