FFCP PHASE1:Hg19::chr15:27216555..27216580,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:27216555..27216580,+ to FFCP PHASE1:Hg19::chr15:27216555..27216580,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2567 | |EntrezGene=2567 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4088 | |HGNC=4088 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_ENST00000553440_5end | |||
|cluster_id=chr15:27216555..27216580,+ | |||
|coexpression_cluster_id=C2328 | |||
|description=CAGE_peak_3_at_GABRG3_5end | |||
|id=chr15:27216555..27216580,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.72e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.40e-66!57;UBERON:0005068!5.40e-66!57;UBERON:0006241!5.40e-66!57;UBERON:0007135!5.40e-66!57;UBERON:0002616!7.69e-55!59;UBERON:0002780!9.20e-55!41;UBERON:0001890!9.20e-55!41;UBERON:0006240!9.20e-55!41;UBERON:0003080!3.20e-53!42;UBERON:0001869!5.89e-53!32;UBERON:0002020!8.61e-53!34;UBERON:0003528!8.61e-53!34;UBERON:0001893!1.06e-52!34;UBERON:0001017!2.84e-52!82;UBERON:0003075!1.15e-51!86;UBERON:0007284!1.15e-51!86;UBERON:0000955!1.18e-51!69;UBERON:0006238!1.18e-51!69;UBERON:0005743!1.64e-51!86;UBERON:0002791!1.22e-50!33;UBERON:0002346!1.06e-48!90;UBERON:0000073!3.93e-47!94;UBERON:0001016!3.93e-47!94;UBERON:0007023!3.85e-46!115;UBERON:0003056!3.77e-42!61;UBERON:0000956!1.00e-39!25;UBERON:0000203!1.00e-39!25;UBERON:0002619!2.13e-38!22;UBERON:0000153!3.23e-35!129;UBERON:0007811!3.23e-35!129;UBERON:0001950!1.02e-34!20;UBERON:0000033!5.85e-33!123;UBERON:0004121!1.55e-28!169;UBERON:0000924!1.69e-27!173;UBERON:0006601!1.69e-27!173;UBERON:0000025!8.09e-16!194;UBERON:0002308!3.06e-14!9;UBERON:0000125!3.06e-14!9;UBERON:0000200!8.72e-14!6;UBERON:0000064!1.18e-13!219;UBERON:0003076!1.27e-13!15;UBERON:0003057!1.27e-13!15;UBERON:0004111!1.64e-13!241;UBERON:0000477!1.73e-13!286;UBERON:0000475!2.27e-13!365;UBERON:0000483!7.59e-12!309;UBERON:0002021!1.30e-11!5;UBERON:0000119!1.41e-11!312;UBERON:0001872!1.48e-11!5;UBERON:0002420!7.25e-11!9;UBERON:0007245!7.25e-11!9;UBERON:0010009!7.25e-11!9;UBERON:0010011!7.25e-11!9;UBERON:0000454!7.25e-11!9;UBERON:0009663!1.15e-10!7;UBERON:0000062!5.62e-10!511;UBERON:0001871!1.47e-09!7;UBERON:0004733!2.22e-09!12;UBERON:0002028!2.22e-09!12;UBERON:0007277!2.22e-09!12;UBERON:0000369!4.36e-09!4;UBERON:0002435!4.36e-09!4;UBERON:0000204!4.36e-09!4;UBERON:0010082!4.36e-09!4;UBERON:0000481!8.47e-09!347;UBERON:0002298!9.50e-09!8;UBERON:0004732!1.52e-08!13;UBERON:0002771!1.20e-07!3;UBERON:0000922!1.54e-07!612;UBERON:0000349!3.60e-07!5;UBERON:0005383!3.94e-07!3;UBERON:0005382!3.94e-07!3;UBERON:0000988!7.76e-07!3;UBERON:0006947!8.59e-07!3;UBERON:0004054!8.59e-07!3;UBERON:0001896!9.50e-07!3;UBERON:0005290!9.50e-07!3;UBERON:0010096!9.50e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.80e-64;32!UBERON:0003528;9.16e-64;34!UBERON:0002020;9.16e-64;34!UBERON:0002619;4.43e-60;22!UBERON:0001893;2.40e-59;34!UBERON:0002791;3.44e-59;32!UBERON:0000956;1.19e-58;25!UBERON:0000203;1.19e-58;25!UBERON:0001950;1.82e-52;20!UBERON:0002780;1.90e-46;41!UBERON:0001890;1.90e-46;41!UBERON:0000073;1.24e-34;53!UBERON:0002616;1.24e-34;53!UBERON:0000200;2.49e-27;6!UBERON:0000955;3.16e-26;68!UBERON:0001017;1.51e-25;75!UBERON:0001872;1.29e-22;5!UBERON:0000125;4.36e-17;9!UBERON:0002308;4.36e-17;9!UBERON:0002021;1.69e-15;5!UBERON:0001870;8.84e-15;3!UBERON:0001016;9.02e-15;83!UBERON:0007023;1.81e-11;114!UBERON:0000369;1.60e-10;4!UBERON:0002435;1.60e-10;4!UBERON:0000204;1.60e-10;4!UBERON:0002702;1.68e-10;2!UBERON:0009663;2.05e-10;7!UBERON:0000007;4.03e-10;2!UBERON:0002771;6.80e-10;2!UBERON:0001954;1.62e-09;2!UBERON:0002148;1.62e-09;2!UBERON:0006331;1.62e-09;2!UBERON:0009662;1.62e-09;2!UBERON:0003022;1.62e-09;2!UBERON:0002421;1.62e-09;2!UBERON:0002600;1.62e-09;2!UBERON:0000349;2.23e-08;5!UBERON:0002420;4.08e-08;9!UBERON:0007245;4.08e-08;9!UBERON:0010009;4.08e-08;9!UBERON:0010011;4.08e-08;9!UBERON:0000454;4.08e-08;9!UBERON:0011216;1.28e-07;132!UBERON:0002298;6.02e-07;6!UBERON:0005383;9.21e-07;3!UBERON:0005382;9.21e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.36e-74,34;UBERON:0002020,2.36e-74,34;UBERON:0001869,2.70e-73,32;UBERON:0001893,8.84e-69,34;UBERON:0002791,5.79e-67,32;UBERON:0002780,9.05e-67,41;UBERON:0001890,9.05e-67,41;UBERON:0003080,9.05e-67,41;UBERON:0006240,9.05e-67,41;UBERON:0000073,2.15e-63,53;UBERON:0002616,2.15e-63,53;UBERON:0002619,4.88e-60,22;UBERON:0001049,1.05e-59,56;UBERON:0005068,1.05e-59,56;UBERON:0006241,1.05e-59,56;UBERON:0007135,1.05e-59,56;UBERON:0000956,1.53e-58,25;UBERON:0000203,1.53e-58,25;UBERON:0000955,1.29e-54,68;UBERON:0006238,1.29e-54,68;UBERON:0001950,1.68e-52,20;UBERON:0001017,3.09e-48,81;UBERON:0003056,9.02e-47,61;UBERON:0001016,8.17e-43,89;UBERON:0003075,8.06e-42,82;UBERON:0007284,8.06e-42,82;UBERON:0002346,1.40e-39,86;UBERON:0007023,1.17e-35,114;UBERON:0010371,1.28e-31,104;UBERON:0000200,2.18e-27,6;UBERON:0010314,1.80e-25,132;UBERON:0001872,1.16e-22,5;UBERON:0004121,1.01e-20,171;UBERON:0000924,1.01e-20,171;UBERON:0006601,1.01e-20,171;UBERON:0011216,2.34e-19,223;UBERON:0000125,5.92e-17,9;UBERON:0002308,5.92e-17,9;UBERON:0000025,1.67e-15,192;UBERON:0002021,1.69e-15,5;UBERON:0001870,9.49e-15,3;UBERON:0004111,4.24e-13,240;UBERON:0000369,1.77e-10,4;UBERON:0002435,1.77e-10,4;UBERON:0000204,1.77e-10,4;UBERON:0010082,1.77e-10,4;UBERON:0002702,1.84e-10,2;UBERON:0009663,2.48e-10,7;UBERON:0000007,3.86e-10,2;UBERON:0002771,6.36e-10,2;UBERON:0002148,1.85e-09,2;UBERON:0006331,1.85e-09,2;UBERON:0009662,1.85e-09,2;UBERON:0001954,2.02e-09,2;UBERON:0003022,2.02e-09,2;UBERON:0002421,2.02e-09,2;UBERON:0002600,2.02e-09,2;UBERON:0000483,1.11e-08,306;UBERON:0000119,1.58e-08,309;UBERON:0000349,2.51e-08,5;UBERON:0002420,4.71e-08,9;UBERON:0007245,4.71e-08,9;UBERON:0010009,4.71e-08,9;UBERON:0010011,4.71e-08,9;UBERON:0000454,4.71e-08,9;UBERON:0002298,6.16e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23186982565596,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,11.5497582631603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0.984685914873589,0,0,19.6346629559034,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,1.57705766875147,0,0,0,0,0,0,6.38246740773428,0.689486746482929,0,0.173624994933292,0.885741385813839,1.32656082487949,0,0.221158519862449,0.295547618953547,2.85201016300164,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0.702793337176017,0,0,0,0.394584402849391,0,0.91821828489147,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,1.35588444468319,0,0,3.67202616544096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00210144354895,0.410716136675979,0,0,18.402114799552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,1.22583065500418,0,0,0,0,0,3.76647251279753,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80996138906171,1.19009341568421,0,0,0,0.628817220398664,0,0,0,0,0,0,0,0,0,0,3.54427271986794,1.83039397352945,5.00763722825999,1.72022758707021,0.332787154610557,0.993542447062135,0.415045904808692,0,0,0.570930667089935,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17994403148981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0.80057074828547,0,0,2.6976274540513,4.25089728976755,5.42755120794314,3.28186182785208,0.756215088665154,4.91016492495947,4.03689114079628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.7821047386301,3.90539049306924,1.86018116851066,4.12202766260394,1.09394961803644,0,0,0,0,0,0,3.64179362541979,2.73194629621557,0,0,0,0.40781839786099,4.27523028158519,0,0,1.33438257845874,2.51384943865603,0,0.913158720509496,0,0,1.28657779517981,0,0,0,0,0,0,0,0,0,0,3.81048345171836,2.06196181689645,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,8.45391923973372,0,0,0,0,0,0.785233868459781,0.297046400327086,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0,0,0,2.44769364687293,1.74540276136151,0,0,0,0,0,0,0,0,0,0.735159196278759,0,0.0757786982182394,0.803892390468535,0,0.103432995861895,0,0.714193294391221,0.387533459016037,0.806971285846153,0,0,0.808468755832877,0,0,0.336760265072938,0.430333232356058,0,0,0,1.9307228228694,0,0,0,0.813792356631477,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23186982565596,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,11.5497582631603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0.984685914873589,0,0,19.6346629559034,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,1.57705766875147,0,0,0,0,0,0,6.38246740773428,0.689486746482929,0,0.173624994933292,0.885741385813839,1.32656082487949,0,0.221158519862449,0.295547618953547,2.85201016300164,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0.702793337176017,0,0,0,0.394584402849391,0,0.91821828489147,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,1.35588444468319,0,0,3.67202616544096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00210144354895,0.410716136675979,0,0,18.402114799552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,1.22583065500418,0,0,0,0,0,3.76647251279753,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80996138906171,1.19009341568421,0,0,0,0.628817220398664,0,0,0,0,0,0,0,0,0,0,3.54427271986794,1.83039397352945,5.00763722825999,1.72022758707021,0.332787154610557,0.993542447062135,0.415045904808692,0,0,0.570930667089935,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17994403148981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0.80057074828547,0,0,2.6976274540513,4.25089728976755,5.42755120794314,3.28186182785208,0.756215088665154,4.91016492495947,4.03689114079628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.7821047386301,3.90539049306924,1.86018116851066,4.12202766260394,1.09394961803644,0,0,0,0,0,0,3.64179362541979,2.73194629621557,0,0,0,0.40781839786099,4.27523028158519,0,0,1.33438257845874,2.51384943865603,0,0.913158720509496,0,0,1.28657779517981,0,0,0,0,0,0,0,0,0,0,3.81048345171836,2.06196181689645,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,8.45391923973372,0,0,0,0,0,0.785233868459781,0.297046400327086,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0,0,0,2.44769364687293,1.74540276136151,0,0,0,0,0,0,0,0,0,0.735159196278759,0,0.0757786982182394,0.803892390468535,0,0.103432995861895,0,0.714193294391221,0.387533459016037,0.806971285846153,0,0,0.808468755832877,0,0,0.336760265072938,0.430333232356058,0,0,0,1.9307228228694,0,0,0,0.813792356631477,0,0.201273793591026,0 | ||
|short_description=p3@GABRG3 | |||
}} | }} |
Latest revision as of 01:51, 17 September 2015
Short description: | p3@GABRG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GABRG3_5end |
Coexpression cluster: | C2328_anaplastic_hairy_Wilms_occipital_insula_pituitary_brain |
Association with transcript: | -10bp_to_ENST00000553440_5end |
EntrezGene: | GABRG3 |
HGNC: | 4088 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data