FFCP PHASE1:Hg19::chr17:77020224..77020262,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:77020224..77020262,+ to FFCP PHASE1:Hg19::chr17:77020224..77020262,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=114897 | |EntrezGene=114897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14324 | |HGNC=14324 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BXJ1 | |UniProt=Q9BXJ1 | ||
|association_with_transcript=0bp_to_ENST00000311661,ENST00000339142,NM_030968,NM_198594,uc002jwp.2,uc002jwq.2_5end | |||
|cluster_id=chr17:77020224..77020262,+ | |||
|coexpression_cluster_id=C2442 | |||
|description=CAGE_peak_1_at_C1QTNF1_5end | |||
|id=chr17:77020224..77020262,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.82e-18!180;CL:0000680!8.89e-15!57;CL:0000056!8.89e-15!57;CL:0000355!8.89e-15!57;CL:0000192!3.20e-14!42;CL:0000514!3.20e-14!42;CL:0000187!3.64e-14!54;CL:0000183!6.70e-14!59;CL:0000359!3.65e-13!32;CL:0000393!6.38e-12!60;CL:0000211!6.38e-12!60;CL:0002494!1.86e-09!16;CL:0000136!1.51e-08!15;CL:0000057!2.58e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.18e-13;32!CL:0000192;2.88e-11;43!CL:0002494;7.10e-10;16!CL:0000136;4.40e-09;13!CL:0000187;3.25e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.59e-15,58;CL:0000056,1.59e-15,58;CL:0000355,1.59e-15,58;CL:0000192,3.56e-15,43;CL:0000514,3.56e-15,43;CL:0000187,7.04e-15,55;CL:0000359,9.40e-14,32;CL:0000393,2.68e-12,61;CL:0000211,2.68e-12,61;CL:0002494,7.38e-10,16;CL:0000136,6.65e-09,15;CL:0000057,1.55e-08,76 | |||
|ontology_enrichment_development_v019=CL:0000514;2.88e-11;43!CL:0000355;1.54e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;6.03e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.17e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000481!4.24e-22!347;UBERON:0000475!2.78e-20!365;UBERON:0000914!1.89e-18!83;UBERON:0002329!1.89e-18!83;UBERON:0003077!1.89e-18!83;UBERON:0003059!1.89e-18!83;UBERON:0007282!1.89e-18!83;UBERON:0009618!1.89e-18!83;UBERON:0007285!1.89e-18!83;UBERON:0000486!4.49e-18!82;UBERON:0000468!7.23e-18!659;UBERON:0000477!4.71e-17!286;UBERON:0004290!1.50e-16!70;UBERON:0000119!2.18e-16!312;UBERON:0000483!2.60e-16!309;UBERON:0002385!6.78e-16!63;UBERON:0001015!6.78e-16!63;UBERON:0000383!6.78e-16!63;UBERON:0005256!7.12e-16!143;UBERON:0007100!1.48e-15!27;UBERON:0001134!1.50e-15!61;UBERON:0002036!1.50e-15!61;UBERON:0003082!1.50e-15!61;UBERON:0002100!5.59e-15!216;UBERON:0004111!1.20e-14!241;UBERON:0004872!1.80e-14!84;UBERON:0000467!3.64e-14!625;UBERON:0003104!6.15e-14!238;UBERON:0009142!6.15e-14!238;UBERON:0000480!6.88e-14!626;UBERON:0007023!1.04e-13!115;UBERON:0000948!1.34e-13!24;UBERON:0005498!1.34e-13!24;UBERON:0004140!1.34e-13!24;UBERON:0009881!1.34e-13!24;UBERON:0004141!1.34e-13!24;UBERON:0003084!1.34e-13!24;UBERON:0007005!1.34e-13!24;UBERON:0004139!1.34e-13!24;UBERON:0004291!1.34e-13!24;UBERON:0002050!2.72e-13!605;UBERON:0005423!2.72e-13!605;UBERON:0000922!3.89e-13!612;UBERON:0000923!3.98e-13!604;UBERON:0005291!3.98e-13!604;UBERON:0006598!3.98e-13!604;UBERON:0002532!3.98e-13!604;UBERON:0004573!2.14e-10!33;UBERON:0004571!2.14e-10!33;UBERON:0001009!3.71e-10!113;UBERON:0003914!3.77e-10!118;UBERON:0000025!1.89e-09!194;UBERON:0003103!2.69e-09!69;UBERON:0001637!4.92e-09!42;UBERON:0003509!4.92e-09!42;UBERON:0004572!4.92e-09!42;UBERON:0004535!5.55e-09!110;UBERON:0002049!1.08e-08!79;UBERON:0007798!1.08e-08!79;UBERON:0001048!1.98e-08!168;UBERON:0000490!2.03e-08!138;UBERON:0001981!2.64e-08!60;UBERON:0007500!2.64e-08!60;UBERON:0004537!2.64e-08!60;UBERON:0006965!2.64e-08!60;UBERON:0000055!5.95e-08!69;UBERON:0000062!1.06e-07!511;UBERON:0003102!1.81e-07!95;UBERON:0001135!9.03e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.27e-15;25!UBERON:0000948;1.45e-13;22!UBERON:0004573;5.43e-09;33!UBERON:0004571;5.43e-09;33!UBERON:0001135;4.39e-07;15 | |||
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|phase1_expression=65.7675732959415,81.3581990785736,94.7213595524926,22.0161256376887,59.8927866532566,46.2339417773195,12.6649939084155,64.4354270895368,299.579915545215,0.737201809504527,0.697801167972428,0.436882744260345,1.84636884759917,22.6492425916885,23.8606110524099,32.943932176137,30.1347264011988,28.4820935251076,40.4984222996121,0.738726348460727,1.22400414746552,1.56727360739044,1.14494394852423,0.136874425072884,0.125542639594803,0,0,0,0,0,0.154816123316076,2.75826367343678,2.71085326900425,2.58827807116751,0,0,0,0.553995408531877,0.401088894940283,0,0,0,0,0,0,0,0,0.411167888021826,0.619412741790207,0,0,0,0.344745680736619,0.645484683583826,1.35426486594342,0,0,0,0.612167784741805,0,0,0,0,0,2.61188314765726,5.10646702222026,7.4738669879469,0,0,0,1.81619850790011,1.10483290796269,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,314.510857545011,56.3388722151054,71.2194469468464,8.31310050484502,21.5575301573433,15.3537310098473,19.0868627292264,41.363963975724,0.850813354476611,0,0.527008714158756,7.33482822787191,12.750335090239,2.96627554227544,0,0.174129737299267,0,0,0,0,0.39752481473341,0.860234595106124,0,0,0,0,0.208994966536811,0,0,1.33888245105868,6.8480983908555,1.52054421143703,12.4471649349566,0.735326160691737,1.62028389576352,0.17859945656816,0.44905874525234,0.112611480483322,0,0,0.366403487860815,0,0,2.61656431285521,5.4666914686485,15.1956613997496,62.3647241630261,26.1021324881421,8.15737279056221,21.3057488054077,27.7547388897233,18.2533985828698,87.7615119827341,27.8851091184254,30.4039139791033,30.2714855289863,29.9611480729599,5.38939293217732,14.6715236110251,2.2818872861778,17.7843929856643,1.87895197830024,2.5899671098901,1.54495887372473,19.19049209796,5.15904132709426,22.8349976398442,60.5881457213847,25.7157606449699,13.6524204290704,79.0479955997862,4.37673896280572,1.7516592782075,6.92660288710457,4.82875382968922,7.04921930337745,31.3997543114787,8.84771028648164,0.538168907066586,3.84403299873421,5.72216133130817,2.10063767259082,2.67936576019941,1.8034837803194,3.7223371266318,1.18143432568886,1.36411807225678,1.7670364197088,3.22174645248048,5.17267381820198,0.355009592516614,0,1.86516651541536,8.50347753918506,14.1827982707234,13.7666205786722,0.731842236777572,0.265059536642971,0.232387885739037,0.310983165046111,0.252320850875628,0.36497735907583,145.498065066729,52.7457569318166,9.66944449467364,12.0735661288315,3.60939740834793,0.828147600278907,2.36018566109342,1.44606617930089,1.10293972732394,0.871517776369625,2.37270619111097,1.34831308160164,1.76599318612811,1.15424147083917,2.21446636387394,0,48.9773073484366,85.2650526036143,1.26755034821831,0,25.4039659873004,0,5.78045661152634,2.40194934417936,17.9990468070146,11.240175325762,2.6137532827024,4.44424536760942,2.28065813717227,3.11980435583874,0,1.39116485970092,0.70445216541493,14.8697441193906,11.1116523018387,12.1762657430143,0,0,0,0.234004265139238,0.297262324577456,8.43604505880993,13.4385702559088,20.557389100146,5.28395283946805,2.3250715081117,4.60059214998253,0,0,0.829312462163088,0.576479813667846,0.6312121671319,2.03193261734941,6.875791660049,15.2382681373061,42.7681115056763,2.36503233217644,0.901029173531752,4.85904935471983,3.7003257833969,2.61576041299968,2.86019314701705,32.1886572236867,203.864174135573,4.22651376278,9.30783408047047,15.6011155367049,4.37252536245642,0,0.799266537048298,100.799485528994,146.50783345569,16.4648067356154,2.93162565864362,86.3602435444386,8.71147060226772,64.5080266907514,41.8336060128141,47.287224829113,0,0,0,1.67737398844108,4.59447743336456,0,8.39731578671959,17.2600110942322,8.59492623551499,0,0.197030760201927,0,0.128343036279748,6.60646022978405,1.30139853857622,2.31986643833309,1.67516265334349,1.91381625495949,0,0,0,20.3667876253772,12.0040925054323,13.291986161287,2.70362119990049,1.96271887676878,2.83864347061082,15.931232439009,8.42649079237613,4.5481500811197,7.24311499047534,1.32845119707087,2.21243002250044,14.9439816885103,18.2095076440349,10.2943027143257,0,0,0.106727557803444,0,1.66435439510497,0.907170879989041,24.8107807818777,13.5046536493495,21.8914873657797,56.7656431202755,8.18731598506726,17.8547852469404,81.629936544745,5.5515489768956,16.8683639047471,9.44462294158805,20.7701771673448,7.66988497835731,8.21844257223031,13.8349464509267,1.56537681191024,14.8110638132343,4.37018803216121,7.86746489756545,0.902399225814824,0.462092022626489,2.35304930753057,1.46139224653261,1.05551628892876,0,0.170093705276516,0,4.62681758070868,1.89662506280697,4.01351819083883,0.509752546090077,0,0,0,0,0,0.984043937099117,2.60302715731442,22.4629405392035,2.56394501491362,3.13536099698234,42.4956498117168,26.0024098414608,35.3504645657151,5.31688950606671,4.00526404498075,3.99109554287937,1.65403886981437,6.76747542670124,7.25083469571143,2.55679882248303,0.979352392114111,3.14041339185858,1.34533047155574,2.297028824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| ||
|short_description=p1@C1QTNF1 | |||
}} | }} |
Latest revision as of 23:54, 17 September 2015
Short description: | p1@C1QTNF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C1QTNF1_5end |
Coexpression cluster: | C2442_Adipocyte_Cardiac_Mesenchymal_heart_mature_Hair_Smooth |
Association with transcript: | 0bp_to_ENST00000311661, ENST00000339142, NM_030968, NM_198594, uc002jwp.2, uc002jwq.2_5end |
EntrezGene: | C1QTNF1 |
HGNC: | 14324 |
UniProt: | Q9BXJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.59e-15 | 58 |
myoblast | 1.59e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.59e-15 | 58 |
smooth muscle cell | 3.56e-15 | 43 |
smooth muscle myoblast | 3.56e-15 | 43 |
muscle cell | 7.04e-15 | 55 |
vascular associated smooth muscle cell | 9.40e-14 | 32 |
electrically responsive cell | 2.68e-12 | 61 |
electrically active cell | 2.68e-12 | 61 |
cardiocyte | 7.38e-10 | 16 |
fat cell | 6.65e-09 | 15 |
fibroblast | 1.55e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.17e-07 | 14 |