FFCP PHASE1:Hg19::chr22:42486923..42487002,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:42486923..42487002,+ to FFCP PHASE1:Hg19::chr22:42486923..42487002,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100132273 | |EntrezGene=100132273 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000416037,ENST00000417327,ENST00000439129,ENST00000536447,NR_034118,uc003bcc.1,uc003bcd.1_5end | |||
|cluster_id=chr22:42486923..42487002,+ | |||
|coexpression_cluster_id=C3375 | |||
|description=CAGE_peak_1_at_LOC100132273_5end | |||
|id=chr22:42486923..42487002,+ | |||
|ontology_enrichment_celltype=CL:0000084!1.36e-07!25;CL:0000827!1.36e-07!25;CL:0000791!4.14e-07!18;CL:0000789!4.14e-07!18;CL:0002420!4.14e-07!18;CL:0002419!4.14e-07!18;CL:0000790!4.14e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.18e-07;25!CL:0000791;4.73e-07;18!CL:0000789;4.73e-07;18!CL:0002419;4.73e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.25e-07,25;CL:0000827,1.25e-07,25;CL:0000791,3.84e-07,18;CL:0000789,3.84e-07,18;CL:0002420,3.84e-07,18;CL:0002419,3.84e-07,18;CL:0000790,3.84e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.87e-08;82!CL:0000790;4.73e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.65e-38!115;UBERON:0001049!1.08e-27!57;UBERON:0005068!1.08e-27!57;UBERON:0006241!1.08e-27!57;UBERON:0007135!1.08e-27!57;UBERON:0002616!1.42e-25!59;UBERON:0000073!4.32e-24!94;UBERON:0001016!4.32e-24!94;UBERON:0001017!4.77e-24!82;UBERON:0005743!1.61e-23!86;UBERON:0002346!1.51e-22!90;UBERON:0000955!2.26e-22!69;UBERON:0006238!2.26e-22!69;UBERON:0003080!3.44e-21!42;UBERON:0002780!3.50e-21!41;UBERON:0001890!3.50e-21!41;UBERON:0006240!3.50e-21!41;UBERON:0003075!1.70e-20!86;UBERON:0007284!1.70e-20!86;UBERON:0001893!3.06e-18!34;UBERON:0002020!3.73e-18!34;UBERON:0003528!3.73e-18!34;UBERON:0001869!1.14e-17!32;UBERON:0002791!1.16e-17!33;UBERON:0002619!1.94e-15!22;UBERON:0003056!2.66e-15!61;UBERON:0000956!2.05e-14!25;UBERON:0000203!2.05e-14!25;UBERON:0001950!2.20e-14!20;UBERON:0000924!7.85e-13!173;UBERON:0006601!7.85e-13!173;UBERON:0004121!1.91e-11!169;UBERON:0000153!2.49e-10!129;UBERON:0007811!2.49e-10!129;UBERON:0000033!3.56e-09!123;UBERON:0003076!1.16e-07!15;UBERON:0003057!1.16e-07!15;UBERON:0004732!9.32e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.74e-16;32!UBERON:0003528;9.37e-16;34!UBERON:0002020;9.37e-16;34!UBERON:0001893;9.60e-16;34!UBERON:0002791;9.73e-16;32!UBERON:0002619;1.12e-15;22!UBERON:0002780;2.04e-15;41!UBERON:0001890;2.04e-15;41!UBERON:0000073;5.59e-15;53!UBERON:0002616;5.59e-15;53!UBERON:0001950;1.30e-14;20!UBERON:0000956;2.48e-14;25!UBERON:0000203;2.48e-14;25!UBERON:0001017;7.26e-11;75!UBERON:0000955;7.66e-11;68!UBERON:0007023;1.21e-10;114!UBERON:0001016;6.51e-10;83!UBERON:0004732;6.83e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.75e-38,114;UBERON:0001049,7.95e-28,56;UBERON:0005068,7.95e-28,56;UBERON:0006241,7.95e-28,56;UBERON:0007135,7.95e-28,56;UBERON:0000073,1.58e-26,53;UBERON:0002616,1.58e-26,53;UBERON:0001016,2.11e-24,89;UBERON:0001017,5.66e-24,81;UBERON:0002346,1.61e-22,86;UBERON:0000955,2.36e-22,68;UBERON:0006238,2.36e-22,68;UBERON:0002780,2.68e-21,41;UBERON:0001890,2.68e-21,41;UBERON:0003080,2.68e-21,41;UBERON:0006240,2.68e-21,41;UBERON:0003075,1.92e-20,82;UBERON:0007284,1.92e-20,82;UBERON:0001893,2.43e-18,34;UBERON:0003528,2.98e-18,34;UBERON:0002020,2.98e-18,34;UBERON:0001869,9.17e-18,32;UBERON:0002791,2.16e-17,32;UBERON:0003056,1.36e-15,61;UBERON:0002619,1.60e-15,22;UBERON:0010371,1.28e-14,104;UBERON:0000956,1.72e-14,25;UBERON:0000203,1.72e-14,25;UBERON:0001950,1.85e-14,20;UBERON:0004121,6.46e-13,171;UBERON:0000924,6.46e-13,171;UBERON:0006601,6.46e-13,171;UBERON:0010314,2.71e-09,132;UBERON:0011216,2.63e-08,223;UBERON:0003076,1.07e-07,15;UBERON:0003057,1.07e-07,15;UBERON:0004732,8.68e-07,13 | |||
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| ||
|short_description=p1@LOC100132273 | |||
}} | }} |
Latest revision as of 23:33, 24 September 2015
Short description: | p1@LOC100132273 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100132273_5end |
Coexpression cluster: | C3375_testis_parietal_brain_occipital_temporal_cerebellum_duodenum |
Association with transcript: | 0bp_to_ENST00000416037, ENST00000417327, ENST00000439129, ENST00000536447, NR_034118, uc003bcc.1, uc003bcd.1_5end |
EntrezGene: | LOC100132273 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.25e-07 | 25 |
pro-T cell | 1.25e-07 | 25 |
mature alpha-beta T cell | 3.84e-07 | 18 |
alpha-beta T cell | 3.84e-07 | 18 |
immature T cell | 3.84e-07 | 18 |
mature T cell | 3.84e-07 | 18 |
immature alpha-beta T cell | 3.84e-07 | 18 |