FFCP PHASE1:Hg19::chr4:156587853..156587884,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:156587853..156587884,+ to FFCP PHASE1:Hg19::chr4:156587853..156587884,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2982 | |EntrezGene=2982 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4685 | |HGNC=4685 | ||
|TSSclassifier=strong | |||
|UniProt=Q02108,D6RDW3 | |UniProt=Q02108,D6RDW3 | ||
|association_with_transcript=0bp_to_ENST00000506455,ENST00000511108,NM_000856,NM_001130682,NM_001130686,NM_001130687,uc003iou.2,uc003iov.2,uc003iow.2,uc010iqc.2,uc010iqd.2_5end | |||
|cluster_id=chr4:156587853..156587884,+ | |||
|coexpression_cluster_id=C4380 | |||
|description=CAGE_peak_5_at_GUCY1A3_5end | |||
|id=chr4:156587853..156587884,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.33e-12;82!UBERON:0004872;2.53e-07;7!UBERON:0006241;6.70e-07;3!UBERON:0003057;6.70e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.12e-71!115;UBERON:0001049!3.24e-35!57;UBERON:0005068!3.24e-35!57;UBERON:0006241!3.24e-35!57;UBERON:0007135!3.24e-35!57;UBERON:0002616!3.69e-28!59;UBERON:0003080!4.98e-28!42;UBERON:0003075!1.07e-27!86;UBERON:0007284!1.07e-27!86;UBERON:0002780!4.59e-27!41;UBERON:0001890!4.59e-27!41;UBERON:0006240!4.59e-27!41;UBERON:0002346!1.42e-25!90;UBERON:0001017!2.99e-24!82;UBERON:0000073!7.25e-24!94;UBERON:0001016!7.25e-24!94;UBERON:0005743!1.12e-23!86;UBERON:0000955!2.02e-23!69;UBERON:0006238!2.02e-23!69;UBERON:0001893!5.53e-23!34;UBERON:0002020!1.48e-22!34;UBERON:0003528!1.48e-22!34;UBERON:0002791!4.21e-22!33;UBERON:0001869!4.15e-21!32;UBERON:0003056!2.16e-20!61;UBERON:0002619!2.30e-17!22;UBERON:0000153!1.04e-16!129;UBERON:0007811!1.04e-16!129;UBERON:0004121!2.86e-16!169;UBERON:0000956!7.39e-16!25;UBERON:0000203!7.39e-16!25;UBERON:0001950!1.39e-15!20;UBERON:0000924!2.24e-15!173;UBERON:0006601!2.24e-15!173;UBERON:0000033!4.55e-15!123;UBERON:0004111!6.11e-10!241;UBERON:0000477!1.04e-09!286;UBERON:0001871!6.44e-09!7;UBERON:0002420!7.87e-09!9;UBERON:0007245!7.87e-09!9;UBERON:0010009!7.87e-09!9;UBERON:0010011!7.87e-09!9;UBERON:0000454!7.87e-09!9;UBERON:0000025!1.05e-08!194;UBERON:0003076!2.43e-08!15;UBERON:0003057!2.43e-08!15;UBERON:0000064!2.63e-08!219;UBERON:0002308!3.04e-08!9;UBERON:0000125!3.04e-08!9;UBERON:0002298!9.76e-08!8;UBERON:0000062!2.31e-07!511;UBERON:0009663!9.74e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.69e-22;22!UBERON:0001950;2.02e-21;20!UBERON:0002780;5.06e-21;41!UBERON:0001890;5.06e-21;41!UBERON:0001893;3.44e-20;34!UBERON:0001869;3.31e-19;32!UBERON:0002791;3.62e-19;32!UBERON:0000956;6.17e-19;25!UBERON:0000203;6.17e-19;25!UBERON:0000073;5.27e-18;53!UBERON:0002616;5.27e-18;53!UBERON:0003528;1.06e-17;34!UBERON:0002020;1.06e-17;34!UBERON:0007023;1.47e-15;114!UBERON:0001871;6.36e-13;6!UBERON:0001017;2.88e-11;75!UBERON:0001016;4.11e-11;83!UBERON:0000955;1.15e-08;68!UBERON:0000200;1.53e-07;6!UBERON:0002420;3.42e-07;9!UBERON:0007245;3.42e-07;9!UBERON:0010009;3.42e-07;9!UBERON:0010011;3.42e-07;9!UBERON:0000454;3.42e-07;9!UBERON:0002240;6.70e-07;3!UBERON:0005174;6.70e-07;3!UBERON:0001137;6.70e-07;3!UBERON:0000349;7.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.55e-62,114;UBERON:0001049,3.60e-35,56;UBERON:0005068,3.60e-35,56;UBERON:0006241,3.60e-35,56;UBERON:0007135,3.60e-35,56;UBERON:0000073,8.30e-31,53;UBERON:0002616,8.30e-31,53;UBERON:0002780,7.85e-28,41;UBERON:0001890,7.85e-28,41;UBERON:0003080,7.85e-28,41;UBERON:0006240,7.85e-28,41;UBERON:0003075,1.90e-27,82;UBERON:0007284,1.90e-27,82;UBERON:0002346,1.22e-25,86;UBERON:0001017,3.08e-25,81;UBERON:0001893,1.08e-24,34;UBERON:0001016,2.43e-24,89;UBERON:0000955,5.63e-23,68;UBERON:0006238,5.63e-23,68;UBERON:0002619,3.21e-22,22;UBERON:0003528,4.27e-22,34;UBERON:0002020,4.27e-22,34;UBERON:0001869,8.66e-22,32;UBERON:0002791,1.11e-21,32;UBERON:0001950,1.35e-21,20;UBERON:0010314,1.12e-20,132;UBERON:0010371,1.36e-20,104;UBERON:0003056,2.12e-19,61;UBERON:0000956,4.44e-19,25;UBERON:0000203,4.44e-19,25;UBERON:0011216,3.00e-16,223;UBERON:0004121,4.67e-14,171;UBERON:0000924,4.67e-14,171;UBERON:0006601,4.67e-14,171;UBERON:0001871,6.64e-13,6;UBERON:0004111,8.59e-10,240;UBERON:0000025,1.79e-09,192;UBERON:0003076,1.70e-08,15;UBERON:0003057,1.70e-08,15;UBERON:0000200,1.59e-07,6;UBERON:0002420,3.51e-07,9;UBERON:0007245,3.51e-07,9;UBERON:0010009,3.51e-07,9;UBERON:0010011,3.51e-07,9;UBERON:0000454,3.51e-07,9;UBERON:0000349,4.11e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.229240217243854,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0.570025487482497,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,2.64342657158052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,1.57174890597255,0,0,0,0,0,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,0.433099343283221,0,2.66355813128438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75169719801128,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0.577076851905779,0,0.318852545457645,4.19116680008915,11.2988168378096,0,0,1.40398589056729,0,0,2.50634477090067,5.41733688965131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0.47748896947538,0.890894042497916,0.614321404198464,2.98244294329889,2.81338832821025,0,0,0,2.59022384726391,1.65770349318689,0.251932747854276,0,0.123084805461069,0,0.0898683511473268,0,0,1.08507746200627,0,0,0,1.11321717794222,0,0,0.787139999965761,2.17499872630438,0,0,0,0,0,1.38899995946634,0.885741385813839,1.08536794762867,1.52581736317083,2.65390223834939,0.591095237907095,1.53569778007781,0,0,3.23191085715948,0,0,0,0,0,0,0.533034776018635,1.02193298195737,0,0,0,0,0,0,0.317873157960757,0.210998064528027,0,0,0,4.97630965539252,2.91909962861019,0.611030144933625,0,0,0,3.84186457989859,4.01288823649394,1.1713222286267,0,0,0,0.789168805698781,2.41981432097328,1.53036380815245,3.03295582216742,0,0.207376382794494,0,0,0,0,0,0,0.520679215005393,0,0,1.7472666824203,0,0,0,0,1.35784623083787,0,2.25980740780532,0,0,2.02594547058812,0,0.400794101257669,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,2.0535806833799,0,0,0,4.74780082162832,4.35404805622199,0,0.199679000498991,0.858452096273142,2.67805748930247,3.42635709682304,0,0,0,0,0,0,0.423366660328922,0.795229689809303,4.35850899557042,0,0,0.415440338029185,0,0.77380195455795,1.39723980313457,0,1.33969702408637,4.98318587282482,0,0,0,3.57347663186684,0.662091970365432,0,0,0,0,0,0,0,0,0.879313402068495,0,1.29282956361551,0.92562821219883,0,0,0.961086713109252,9.58946261107962,2.07119527673598,2.97699613087171,0.395223263795889,0,0,0,0.5013797880454,0,0.327872630709804,0.157054096250234,0.886068179966986,1.22026264901963,1.502291168478,0.573409195690071,1.22021956690538,1.17983165588629,0.138348634936231,0,0,0,0,0,0.28984205722165,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04739592914604,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,2.48865185073115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895260599125562,0.539124056983409,0,1.09209638192014,0,0,0,0,0,0.23658523500376,1.60114149657094,0,0,1.60573062741149,0,1.59633859057151,1.02558182120378,1.76450187355203,1.45230230174858,3.87541549516443,1.42769420259154,0,0,0,0,0,0,0,2.03067886542995,0,0,0,0,0,1.68843961545987,0.781078098613847,1.86018116851066,1.96589011601111,0,0.548257766857182,4.46590060550365,0,0,0,2.69026977775059,0.606965604236632,2.50428410486427,0.266107110487916,0.115233987555779,0,1.15548546060614,1.18390992413128,0,0.222462803784138,2.8257513426185,0.471346769748006,0,4.56579360254748,0.215927591218621,0,12.8657779517981,0,0,0,0.801711364730253,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0.121917924982269,1.94228651156368,0.513314034281235,0,2.91426595835484,0.233939463462106,0,0,0.11294608203896,0,0.150962843566674,1.00326405540328,0.874238242015829,2.35158648180761,0.735444965261716,2.12108892391463,2.1593931382644,2.37637120261669,2.113278637917,0,1.4097587696978,3.86747327841463,0,0,0,0,0.730336388246517,3.21110498383179,1.29005624836306,0,1.01987235286372,0,4.2322147241232,0,0,0,0,0,1.14028650910293,0,0,0,0,0.985123076837112,0.535928260312357,0.829169439458779,2.0686599172379,1.70587185520785,3.80903090341985,0.775066918032073,0.869046000142011,0.112131862580613,0.636471582781649,3.43599221228973,2.61260097476354,3.42233301085281,1.75115337837928,0.78894425931944,0.99798106963804,0,0,0,0,2.34640942403454,3.05603610457166,3.25516942652591,1.33151354837103,2.6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1655931668334,0 | ||
|short_description=p5@GUCY1A3 | |||
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Latest revision as of 08:11, 16 September 2015
Short description: | p5@GUCY1A3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GUCY1A3_5end |
Coexpression cluster: | C4380_retina_smallcell_acute_rectum_penis_lung_temporal |
Association with transcript: | 0bp_to_ENST00000506455, ENST00000511108, NM_000856, NM_001130682, NM_001130686, NM_001130687, uc003iou.2, uc003iov.2, uc003iow.2, uc010iqc.2, uc010iqd.2_5end |
EntrezGene: | GUCY1A3 |
HGNC: | 4685 |
UniProt: | Q02108D6RDW3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data