FFCP PHASE1:Hg19::chr5:67589210..67589249,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:67589210..67589249,+ to FFCP PHASE1:Hg19::chr5:67589210..67589249,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:67589210..67589249,+ | |||
|coexpression_cluster_id=C1531 | |||
|description=CAGE_peak_at_chr5:67589210..67589249,+ | |||
|id=chr5:67589210..67589249,+ | |||
|ontology_enrichment_celltype=CL:0000084!7.83e-08!25;CL:0000827!7.83e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000624;1.08e-09;6!CL:0000084;1.06e-08;25!CL:0000791;1.99e-08;18!CL:0000789;1.99e-08;18!CL:0002419;1.99e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,6.47e-10,6;CL:0000084,5.42e-09,25;CL:0000827,5.42e-09,25;CL:0000791,9.08e-09,18;CL:0000789,9.08e-09,18;CL:0002420,9.08e-09,18;CL:0002419,9.08e-09,18;CL:0000790,9.08e-09,18 | |||
|ontology_enrichment_development_v019=CL:0000790;1.99e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.15e-20!115;UBERON:0001049!2.50e-16!57;UBERON:0005068!2.50e-16!57;UBERON:0006241!2.50e-16!57;UBERON:0007135!2.50e-16!57;UBERON:0003080!2.33e-15!42;UBERON:0002780!8.91e-15!41;UBERON:0001890!8.91e-15!41;UBERON:0006240!8.91e-15!41;UBERON:0002020!4.99e-14!34;UBERON:0003528!4.99e-14!34;UBERON:0001893!2.09e-13!34;UBERON:0002791!4.93e-13!33;UBERON:0001869!6.90e-13!32;UBERON:0002616!7.24e-13!59;UBERON:0002619!4.51e-12!22;UBERON:0001950!7.83e-11!20;UBERON:0000956!3.97e-10!25;UBERON:0000203!3.97e-10!25;UBERON:0002346!5.93e-10!90;UBERON:0003075!1.05e-09!86;UBERON:0007284!1.05e-09!86;UBERON:0005743!2.46e-09!86;UBERON:0001017!2.63e-09!82;UBERON:0000955!2.83e-09!69;UBERON:0006238!2.83e-09!69;UBERON:0003056!3.44e-09!61;UBERON:0000073!7.27e-08!94;UBERON:0001016!7.27e-08!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.87e-18;22!UBERON:0003528;3.44e-17;34!UBERON:0002020;3.44e-17;34!UBERON:0002791;4.44e-17;32!UBERON:0001869;5.77e-17;32!UBERON:0001950;1.18e-15;20!UBERON:0001893;1.85e-15;34!UBERON:0000956;2.29e-15;25!UBERON:0000203;2.29e-15;25!UBERON:0002780;4.71e-15;41!UBERON:0001890;4.71e-15;41!UBERON:0000073;8.12e-11;53!UBERON:0002616;8.12e-11;53!UBERON:0001871;7.69e-08;6!UBERON:0000955;1.25e-07;68!UBERON:0001017;3.44e-07;75!UBERON:0002420;5.36e-07;9!UBERON:0000125;5.36e-07;9!UBERON:0007245;5.36e-07;9!UBERON:0002308;5.36e-07;9!UBERON:0010009;5.36e-07;9!UBERON:0010011;5.36e-07;9!UBERON:0000454;5.36e-07;9!UBERON:0000200;8.43e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,3.31e-21,34;UBERON:0002020,3.31e-21,34;UBERON:0001049,4.92e-21,56;UBERON:0005068,4.92e-21,56;UBERON:0006241,4.92e-21,56;UBERON:0007135,4.92e-21,56;UBERON:0002780,5.06e-21,41;UBERON:0001890,5.06e-21,41;UBERON:0003080,5.06e-21,41;UBERON:0006240,5.06e-21,41;UBERON:0000073,9.50e-20,53;UBERON:0002616,9.50e-20,53;UBERON:0002791,2.72e-19,32;UBERON:0001893,2.93e-19,34;UBERON:0001869,6.05e-19,32;UBERON:0002619,1.64e-18,22;UBERON:0007023,4.68e-17,114;UBERON:0001950,5.22e-16,20;UBERON:0000956,1.09e-15,25;UBERON:0000203,1.09e-15,25;UBERON:0000955,3.78e-15,68;UBERON:0006238,3.78e-15,68;UBERON:0001017,7.60e-15,81;UBERON:0001016,2.64e-12,89;UBERON:0003075,4.25e-12,82;UBERON:0007284,4.25e-12,82;UBERON:0002346,5.53e-12,86;UBERON:0003056,2.11e-11,61;UBERON:0010371,3.43e-11,104;UBERON:0004121,1.65e-08,171;UBERON:0000924,1.65e-08,171;UBERON:0006601,1.65e-08,171;UBERON:0001871,4.20e-08,6;UBERON:0002420,2.62e-07,9;UBERON:0007245,2.62e-07,9;UBERON:0010009,2.62e-07,9;UBERON:0010011,2.62e-07,9;UBERON:0000454,2.62e-07,9;UBERON:0000125,5.55e-07,9;UBERON:0002308,5.55e-07,9 | |||
|phase1_expression=1.09007027562334,3.21150785836475,0.281908808191942,1.0007329835313,1.34088328328186,1.74467704820074,0,0,1.82829939739887,0,0,0,0,0.123766352960047,0.662794751455832,0,1.80808358407193,0,1.46379839637152,0,0,0,0,0.410623275218653,0,0.229240217243854,0.0821005894499457,0,0,1.53531759238885,0.619264493264304,0,0,0,0.0774672005803016,0,0.587200878669695,0,3.20871115952227,3.25516306073778,0.671746422719773,0,0,0.726991193897824,1.51150377475524,0.242584061187816,0.929716147622738,0.411167888021826,0,0,0,0.709446689665756,0.689491361473237,0,0,0.941211697713023,0.272906150057846,0.224723484445085,0.612167784741805,0,0,0.989553900560148,0.398927315243264,1.27867425159808,1.7412554317715,0,0,3.76872997885115,4.17186334736161,0.868755378820466,0,0.368277635987565,0,0.211255286311942,0.212604299965044,0,0.22465726229299,0.300353785683013,0.64290234678832,0,1.39241674039363,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.764546456250458,0,0,0,1.7703879310245,14.1483874589699,16.0369169219617,1.00311897234407,3.58514493296949,0.946895611469467,1.94826728407911,0.222820913770347,4.12448270464772,1.55073726208535,4.06205795647523,0.896639238079726,1.43065282315866,1.80881695064044,1.10540007114339,0.289803085735052,1.18629250529648,0.535081656179426,2.09071047609954,0.339928028092699,2.68254345521345,3.09264700934367,7.33757106856558,0.318565414324097,1.95325036156926,0,0.451725357233318,0.383959833463255,0,0.473554504088034,1.64225599384209,2.62088766192152,12.3022490060413,8.25499102131954,0,0,0,0,0,0.289693037921647,0,0,0.378139268656271,0.221729397462564,0.87834785693126,0.130979075497713,0,0,0.324547393654683,0.174129737299267,1.06366368415092,0.238490624305342,0,0,0,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,1.31780417436063,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0.311211035399766,0,0.163461903113459,0,1.72852777344,0,0.312160076830321,0,0.448346041655403,0.352303495931295,0,0,0.204154171254893,0.245668634623536,0.309977343527296,0,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0.358779271377724,0.213557388818567,0.423863802319124,0,0,0.515281080091258,0.37223371266318,0.337552664482532,0,0.504867548488229,0,0.161646056818812,0.355009592516614,0,0.169560592310488,0.193260853163297,0,0,0,0.265059536642971,0.464775771478074,0.207322110030741,0,0,0,2.57296375277154,0,4.64367928031979,1.44375896333917,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,4.72631925345123,0.441463099414651,0.122988438543114,0,0.219500570817251,0,0.301586917234893,0.277765335475589,0,0,0,0.811512834825538,0.117408694235822,0.144366447761074,0.925971025153221,0.570762456703795,0,0.858486162094873,0,0,0.148631162288728,0,0.16798212819886,0.141775097242386,2.4180801129769,0.581267877027924,0.383382679165211,1.47798971368783,1.58487181223807,0.414656231081544,0.576479813667846,0.37872730027914,0.317489471460845,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0,0,0.845302752556,1.32969058292435,0,0,0,0,0.857867961948885,0,0,0,0.710783897485092,0,0,0,0.699810938274399,0,1.00451418286425,0,0,0,0,0.144781306667579,0.821905290201534,0,0.336255431980582,2.1673383622212,9.05635814409973,8.59898343074314,0,0,0,1.00509759200609,0,2.24702107184155,0,0.414415513436035,0.49076596687656,1.50051156317903,0,1.45579603071565,1.07057393278297,0.315404830067869,0.468565659970853,0,0,0,0,0.368738337083406,0.347534457872331,0,0,1.24060815673732,0.431428401637234,0.74709290462411,0,1.66435439510497,0,0,0.153461973288062,0.561320188866147,0.128139149255701,0,0.160853921143607,0,0.462629081407967,0.177561725313127,0.0821271560138091,0.519254429183621,0.116210378459959,0.725156697549733,0.40101294060657,0.552485933615378,0.229628896329213,0.546273504020151,0.524497659837696,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0.877039506583738,0.261435451024901,0.769350375349168,0.328014645699706,0,1.03041011647722,0.640986253728404,0.41254749960294,0,0.650060246036521,0,0,0,0.15350367472613,0,0.429680979473094,0.290033387828457,0.426133137080504,0.267096106940212,0.165284915360978,0,0.127612712494584,0.30347334256665,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,5.13526785640705,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0.354761064070598,1.05553817648832,0.329294892959902,0,0,0,0,0,0.470719003883896,0,0,0,0.229723400206959,0,0,0,0.476463550915578,0,0.648473311192717,0.540031437238115,0,0.106824071127473,0,0,0.185803175125719,0.577076851905779,0.213425530045242,1.11598390910176,1.39705560002972,0.191505370132367,0.211673582723883,3.24621940274555,0.561594356226918,1.14117339516596,0.47003968731907,0,0.338583555603207,0.802940375518498,2.21979677910152,0,0.343505344755765,0,0.447352215784832,0.333698283423817,0.19538809540204,0.27840617389524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| ||
|short_description=p@chr5:67589210..67589249,+ | |||
}} | }} |
Latest revision as of 15:54, 30 July 2015
Short description: | p@chr5:67589210..67589249, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:67589210..67589249, + |
Coexpression cluster: | C1531_CD4_CD8_medial_Natural_salivary_olfactory_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 6.47e-10 | 6 |
T cell | 5.42e-09 | 25 |
pro-T cell | 5.42e-09 | 25 |
mature alpha-beta T cell | 9.08e-09 | 18 |
alpha-beta T cell | 9.08e-09 | 18 |
immature T cell | 9.08e-09 | 18 |
mature T cell | 9.08e-09 | 18 |
immature alpha-beta T cell | 9.08e-09 | 18 |