FFCP PHASE1:Hg19::chr5:80256173..80256188,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:80256173..80256188,+ to FFCP PHASE1:Hg19::chr5:80256173..80256188,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5924 | |EntrezGene=5924 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9876 | |HGNC=9876 | ||
|TSSclassifier=strong | |||
|UniProt=O14827 | |UniProt=O14827 | ||
|association_with_transcript=-302bp_to_ENST00000265080_5end | |||
|cluster_id=chr5:80256173..80256188,+ | |||
|description=CAGE_peak_1_at_RASGRF2_5end | |||
|id=chr5:80256173..80256188,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.42e-07;18!CL:0000789;3.42e-07;18!CL:0002419;3.42e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.69e-07,18;CL:0000789,3.69e-07,18;CL:0002420,3.69e-07,18;CL:0002419,3.69e-07,18;CL:0000790,3.69e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.67e-07;82!CL:0000790;3.42e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.13e-37!115;UBERON:0005743!1.84e-28!86;UBERON:0003075!5.69e-28!86;UBERON:0007284!5.69e-28!86;UBERON:0001017!1.13e-26!82;UBERON:0001049!8.93e-26!57;UBERON:0005068!8.93e-26!57;UBERON:0006241!8.93e-26!57;UBERON:0007135!8.93e-26!57;UBERON:0003056!9.41e-26!61;UBERON:0000073!3.94e-25!94;UBERON:0001016!3.94e-25!94;UBERON:0002346!6.47e-25!90;UBERON:0002616!3.10e-23!59;UBERON:0000033!1.85e-22!123;UBERON:0000153!1.97e-22!129;UBERON:0007811!1.97e-22!129;UBERON:0003080!2.04e-22!42;UBERON:0000955!2.75e-22!69;UBERON:0006238!2.75e-22!69;UBERON:0002780!7.91e-22!41;UBERON:0001890!7.91e-22!41;UBERON:0006240!7.91e-22!41;UBERON:0001893!7.65e-19!34;UBERON:0002020!2.23e-18!34;UBERON:0003528!2.23e-18!34;UBERON:0002791!4.08e-18!33;UBERON:0001869!1.35e-17!32;UBERON:0004111!1.37e-17!241;UBERON:0000477!2.74e-17!286;UBERON:0004121!3.60e-17!169;UBERON:0000924!1.06e-15!173;UBERON:0006601!1.06e-15!173;UBERON:0002619!3.08e-14!22;UBERON:0000956!6.51e-14!25;UBERON:0000203!6.51e-14!25;UBERON:0000025!7.70e-14!194;UBERON:0001950!3.68e-13!20;UBERON:0000119!1.92e-12!312;UBERON:0000483!6.81e-12!309;UBERON:0000064!1.06e-09!219;UBERON:0000481!3.25e-09!347;UBERON:0001009!5.08e-07!113;UBERON:0000475!7.18e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.40e-19;34!UBERON:0001869;1.43e-18;32!UBERON:0002791;2.35e-18;32!UBERON:0003528;2.40e-18;34!UBERON:0002020;2.40e-18;34!UBERON:0002780;3.60e-18;41!UBERON:0001890;3.60e-18;41!UBERON:0002619;2.27e-16;22!UBERON:0000956;4.99e-16;25!UBERON:0000203;4.99e-16;25!UBERON:0000073;9.03e-16;53!UBERON:0002616;9.03e-16;53!UBERON:0001950;4.15e-15;20!UBERON:0001017;4.96e-13;75!UBERON:0000955;3.03e-12;68!UBERON:0001016;1.24e-10;83!UBERON:0007023;1.50e-09;114!UBERON:0002104;1.64e-07;21!UBERON:0002420;3.04e-07;9!UBERON:0007245;3.04e-07;9!UBERON:0010009;3.04e-07;9!UBERON:0010011;3.04e-07;9!UBERON:0000454;3.04e-07;9!UBERON:0001032;3.78e-07;24!UBERON:0004456;3.78e-07;24!UBERON:0000970;5.33e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.13e-37,114;UBERON:0003075,1.27e-34,82;UBERON:0007284,1.27e-34,82;UBERON:0002346,1.70e-31,86;UBERON:0003056,1.35e-30,61;UBERON:0001017,1.48e-30,81;UBERON:0001049,1.26e-29,56;UBERON:0005068,1.26e-29,56;UBERON:0006241,1.26e-29,56;UBERON:0007135,1.26e-29,56;UBERON:0000073,4.95e-28,53;UBERON:0002616,4.95e-28,53;UBERON:0000955,1.24e-26,68;UBERON:0006238,1.24e-26,68;UBERON:0001016,2.68e-26,89;UBERON:0002780,1.90e-25,41;UBERON:0001890,1.90e-25,41;UBERON:0003080,1.90e-25,41;UBERON:0006240,1.90e-25,41;UBERON:0010314,9.34e-25,132;UBERON:0001893,6.33e-22,34;UBERON:0010371,6.33e-22,104;UBERON:0003528,2.23e-21,34;UBERON:0002020,2.23e-21,34;UBERON:0001869,1.87e-20,32;UBERON:0002791,2.80e-20,32;UBERON:0004121,3.13e-19,171;UBERON:0000924,3.13e-19,171;UBERON:0006601,3.13e-19,171;UBERON:0002619,1.70e-16,22;UBERON:0000956,4.11e-16,25;UBERON:0000203,4.11e-16,25;UBERON:0001950,3.17e-15,20;UBERON:0004111,5.46e-15,240;UBERON:0011216,9.53e-13,223;UBERON:0000025,1.39e-11,192;UBERON:0000119,2.00e-10,309;UBERON:0000483,7.06e-10,306;UBERON:0000970,1.53e-07,21;UBERON:0002104,1.53e-07,21;UBERON:0002420,2.82e-07,9;UBERON:0007245,2.82e-07,9;UBERON:0010009,2.82e-07,9;UBERON:0010011,2.82e-07,9;UBERON:0000454,2.82e-07,9;UBERON:0000020,3.79e-07,24;UBERON:0001032,3.79e-07,24;UBERON:0004456,3.79e-07,24;UBERON:0001456,5.85e-07,22;UBERON:0000019,6.99e-07,20;UBERON:0000047,6.99e-07,20;UBERON:0010312,6.99e-07,20;UBERON:0004088,6.99e-07,20;UBERON:0010230,6.99e-07,20;UBERON:0003072,6.99e-07,20;UBERON:0004128,6.99e-07,20;UBERON:0003071,6.99e-07,20 | |||
|phase1_expression=0,0.428201047781966,0,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,4.42321085702716,0,0,0.263766978228454,0,0.331397375727916,0.672325146451775,0,0,0,1.23121058076788,1.42800483870977,0,1.43117993565528,1.64249310087461,1.12988375635323,0,0,0,0.786728553697808,2.30297638858328,0.309632246632152,0,0,0.369754010166788,0,0,0,1.10799081706375,0.601633342410425,1.30206522429511,0,0,0.257575567634187,0.145398238779565,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,14.3598132183098,7.07419372948497,4.72883447698871,0.334372990781356,8.79990119910694,6.15482147455153,1.94826728407911,1.55974639639243,0.294605907474837,0.664601683750863,0.541607727530031,0.512365278902701,0.520237390239513,16.4437904603676,16.3046510493651,12.4615326866073,9.49034004237187,9.09638815505025,10.4535523804977,4.53237370790265,4.21542542962113,7.55980380061786,6.32549230048757,6.68987370080603,5.20866763085135,4.75226022224187,7.37818083481087,8.44711633619161,1.24930726552346,7.34009481336452,3.28451198768419,7.4594494993151,4.54648332831962,8.97911304073354,0,0,0.12786256184353,0,0,0,0,0,4.72674085820339,6.87361132133948,6.58760892698445,7.92423406761161,0,0,0.324547393654683,0.174129737299267,0,0,0,0,1.59009925893364,2.58070378531837,3.12426451446835,0.56530794192401,1.67799774483962,7.70330517432189,3.55291443112578,5.94358546089456,4.98072767761394,6.6944122552934,5.63961043952806,4.56163263431108,10.2506064170231,5.14728312484216,2.43042584364528,0.535798369704479,0.22452937262617,0.675668882899933,1.53316637465883,0,0.366403487860815,1.31780417436063,0,0,0.496971951695318,0.506522046658319,2.91300197789081,0.286836620748814,0.354668382198357,0.560677600142307,0,6.41335625884616,0.311211035399766,1.75123873690594,0,1.21085942115945,1.15235184896,14.5279287736954,0.312160076830321,0.570471821544449,0.448346041655403,0.352303495931295,0.971237666208789,1.40450806702248,3.26646674007829,4.42203542322365,5.06296327761251,15.4440371446667,3.4617370098998,0,1.43723628363248,6.73344455816265,4.00379263590285,8.31192346452549,1.75591048352335,0.919463387397059,3.30523729594513,0.226864366320042,0.538168907066586,0,0,0.600182192168805,0.309157587715317,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0.339121184620975,0,0.272746120590835,0.286804595389004,0.365921118388786,0.795178609928912,0.813357600086629,1.55491582523056,2.27088765788066,4.01475094983413,1.56449532329816,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0,1.47586126251736,3.60292401626904,0,0,0,0,33.8840637522738,3.11980435583874,2.88662684050547,4.17349457910277,13.0323650601762,10.3943842387973,5.09284063834272,8.18092854608773,0,0,0,0,0,0,0.335964256397719,0,0.268675568108545,0,0,0,0,0.207328115540772,0,0,0.126995788584338,0,0,0,0,0,0,4.59737445815979,2.1798003441664,2.4935017179123,10.3417372606222,0,0,0.797814349754612,0,0.257207374262142,0,0,0.57191197463259,0,0,0.325736184293735,0.355391948742546,1.58390374586686,22.0050745253498,15.6876022548053,16.2955975626753,0,0,0,0,0,0,0,0,0,0,5.12279976525011,3.88129634747131,3.59360501583295,10.9260688415659,2.60279707715243,0.773288812777695,1.34013012267479,0.637938751653163,0.749007023947182,0,0.828831026872071,0.36807447515742,0,0.542530047399471,0,0,0,0.468565659970853,0,0,0,0,0.184369168541703,1.65078867489357,0.195801157462741,0,2.89475236572042,5.60856922128404,4.90946765895844,0,0,0,0.248107807818777,0.306923946576125,0.561320188866147,0,0.511707249066704,0,0,0.154209693802656,0,0.410635780069046,11.9428518712233,0,2.90062679019893,2.20557117333613,4.05156351317944,6.19998020088876,7.28364672026868,2.75361271414791,0.902399225814824,1.00119938235739,1.56869953835371,0,0.949964660035881,3.4120015221269,3.2317804002538,1.29549549661284,0,1.35473218771926,0.501689773854853,0.764628819135115,0,0.895499018888713,0,0,4.35965212697862,3.60816110269676,6.18218949862176,4.6368455241475,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0.0852266274161009,0.178064071293475,1.15699440752685,1.92190067365106,0.127612712494584,0.50578890427775,0.464845549297286,0.31481234683064,1.3940745403212,3.69640296211307,2.12922412126809,1.73986598415015,0.37064843820784,3.86437194203376,1.116475108079,0,1.5250415513906,1.27948895655667,0.855877976067841,0,0,4.13706652441624,1.92175920815238,3.53437207037059,4.44801459461295,3.17020642346017,5.47635993110675,1.95053495635836,1.94970791705028,0,7.50749512743922,3.53513579884282,0,2.75682671773062,4.64407282668854,3.06915619677634,1.15755106853338,1.31178950409327,1.21746226177622,0,0.281695602532241,1.43411352204052,0.392996164052485,1.07001315444375,1.77380532035299,0,0,4.55367808518858,2.44954304171488,0,0,0,4.0481834334015,0.43050537267123,0,0,0,2.02979043692868,0.764637207142375,1.70894156152249,1.19115887728894,2.87953591160336,0.648473311192717,0.540031437238115,1.58625035258854,0.106824071127473,0,0.245040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| ||
|short_description=p1@RASGRF2 | |||
}} | }} |
Latest revision as of 23:17, 18 September 2015
Short description: | p1@RASGRF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RASGRF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -302bp_to_ENST00000265080_5end |
EntrezGene: | RASGRF2 |
HGNC: | 9876 |
UniProt: | O14827 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.69e-07 | 18 |
alpha-beta T cell | 3.69e-07 | 18 |
immature T cell | 3.69e-07 | 18 |
mature T cell | 3.69e-07 | 18 |
immature alpha-beta T cell | 3.69e-07 | 18 |