FFCP PHASE1:Hg19::chr7:100808843..100808858,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:100808843..100808858,- to FFCP PHASE1:Hg19::chr7:100808843..100808858,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7425 | |EntrezGene=7425 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12684 | |HGNC=12684 | ||
|TSSclassifier=strong | |||
|UniProt=O15240 | |UniProt=O15240 | ||
|association_with_transcript=0bp_to_NM_003378,uc003uxx.3_5end | |||
|cluster_id=chr7:100808843..100808858,- | |||
|coexpression_cluster_id=C206 | |||
|description=CAGE_peak_1_at_VGF_5end | |||
|id=chr7:100808843..100808858,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.53e-10;33!CL:0002057;1.53e-10;33!CL:0000148;9.04e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,8.70e-08,10;CL:0000541,8.70e-08,10;CL:0000860,4.77e-07,42;CL:0002057,4.77e-07,42;CL:0000047,5.35e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.21e-07;82 | |||
|ontology_enrichment_disease=DOID:0050687!6.93e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.71e-26!82;UBERON:0001049!1.02e-25!57;UBERON:0005068!1.02e-25!57;UBERON:0006241!1.02e-25!57;UBERON:0007135!1.02e-25!57;UBERON:0000073!1.97e-25!94;UBERON:0001016!1.97e-25!94;UBERON:0005743!5.87e-25!86;UBERON:0002780!9.49e-21!41;UBERON:0001890!9.49e-21!41;UBERON:0006240!9.49e-21!41;UBERON:0003080!1.34e-20!42;UBERON:0000955!3.03e-20!69;UBERON:0006238!3.03e-20!69;UBERON:0002616!1.21e-19!59;UBERON:0002346!3.73e-19!90;UBERON:0003075!2.20e-18!86;UBERON:0007284!2.20e-18!86;UBERON:0002020!6.27e-18!34;UBERON:0003528!6.27e-18!34;UBERON:0001893!1.21e-17!34;UBERON:0001869!3.83e-17!32;UBERON:0002791!5.18e-17!33;UBERON:0003056!3.31e-15!61;UBERON:0002619!2.59e-14!22;UBERON:0000924!1.83e-13!173;UBERON:0006601!1.83e-13!173;UBERON:0000956!2.27e-13!25;UBERON:0000203!2.27e-13!25;UBERON:0001950!3.08e-13!20;UBERON:0004121!9.18e-13!169;UBERON:0000922!1.14e-11!612;UBERON:0000062!3.41e-10!511;UBERON:0000923!4.86e-10!604;UBERON:0005291!4.86e-10!604;UBERON:0006598!4.86e-10!604;UBERON:0002532!4.86e-10!604;UBERON:0002050!7.66e-10!605;UBERON:0005423!7.66e-10!605;UBERON:0000033!9.84e-10!123;UBERON:0000153!3.27e-09!129;UBERON:0007811!3.27e-09!129;UBERON:0000468!6.39e-09!659;UBERON:0000064!1.12e-08!219;UBERON:0000475!1.39e-08!365;UBERON:0000481!6.06e-08!347;UBERON:0000483!1.77e-07!309;UBERON:0000467!2.98e-07!625;UBERON:0000119!3.04e-07!312;UBERON:0000025!4.29e-07!194;UBERON:0000480!4.39e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.93e-18;22!UBERON:0002780;7.37e-18;41!UBERON:0001890;7.37e-18;41!UBERON:0003528;9.86e-18;34!UBERON:0002020;9.86e-18;34!UBERON:0001869;1.06e-17;32!UBERON:0001893;1.69e-17;34!UBERON:0000073;2.73e-17;53!UBERON:0002616;2.73e-17;53!UBERON:0002791;3.17e-17;32!UBERON:0001950;9.98e-17;20!UBERON:0000956;7.87e-15;25!UBERON:0000203;7.87e-15;25!UBERON:0000955;1.55e-11;68!UBERON:0001017;2.03e-11;75!UBERON:0001016;1.10e-10;83!UBERON:0004732;1.94e-07;13!UBERON:0000125;1.95e-07;9!UBERON:0002308;1.95e-07;9!UBERON:0002420;2.43e-07;9!UBERON:0007245;2.43e-07;9!UBERON:0010009;2.43e-07;9!UBERON:0010011;2.43e-07;9!UBERON:0000454;2.43e-07;9 | |||
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| ||
|short_description=p1@VGF | |||
}} | }} |
Latest revision as of 17:13, 24 September 2015
Short description: | p1@VGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VGF_5end |
Coexpression cluster: | C206_melanoma_somatostatinoma_nonsmall_small_neuroblastoma_smallcell_pituitary |
Association with transcript: | 0bp_to_NM_003378, uc003uxx.3_5end |
EntrezGene: | VGF |
HGNC: | 12684 |
UniProt: | O15240 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 8.70e-08 | 10 |
melanoblast | 8.70e-08 | 10 |
classical monocyte | 4.77e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.77e-07 | 42 |
neuronal stem cell | 5.35e-07 | 8 |