FFCP PHASE1:Hg19::chr8:110656917..110656960,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:110656917..110656960,- to FFCP PHASE1:Hg19::chr8:110656917..110656960,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55638 | |EntrezGene=55638 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26011 | |HGNC=26011 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=47bp_to_ENST00000531284_5end | |||
|cluster_id=chr8:110656917..110656960,- | |||
|coexpression_cluster_id=C4718 | |||
|description=CAGE_peak_4_at_SYBU_5end | |||
|id=chr8:110656917..110656960,- | |||
|ontology_enrichment_celltype=CL:0000066!3.97e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.38e-10;29!UBERON:0006601;1.86e-09;82 | |||
|ontology_enrichment_disease=DOID:305!2.45e-11!106;DOID:0050687!1.64e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.69e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.94e-34!115;UBERON:0001049!1.99e-27!57;UBERON:0005068!1.99e-27!57;UBERON:0006241!1.99e-27!57;UBERON:0007135!1.99e-27!57;UBERON:0005743!1.44e-23!86;UBERON:0001017!7.47e-23!82;UBERON:0003075!7.82e-23!86;UBERON:0007284!7.82e-23!86;UBERON:0000955!1.03e-22!69;UBERON:0006238!1.03e-22!69;UBERON:0002616!7.34e-22!59;UBERON:0002346!2.08e-21!90;UBERON:0000033!2.16e-21!123;UBERON:0000153!1.01e-20!129;UBERON:0007811!1.01e-20!129;UBERON:0003080!1.64e-20!42;UBERON:0000073!3.33e-20!94;UBERON:0001016!3.33e-20!94;UBERON:0002780!7.29e-20!41;UBERON:0001890!7.29e-20!41;UBERON:0006240!7.29e-20!41;UBERON:0004121!3.36e-19!169;UBERON:0002020!1.03e-18!34;UBERON:0003528!1.03e-18!34;UBERON:0000924!1.78e-18!173;UBERON:0006601!1.78e-18!173;UBERON:0001893!2.23e-18!34;UBERON:0001869!3.74e-18!32;UBERON:0002791!1.08e-17!33;UBERON:0002619!1.46e-16!22;UBERON:0003056!3.03e-16!61;UBERON:0001950!3.69e-15!20;UBERON:0000064!6.81e-15!219;UBERON:0000956!1.03e-14!25;UBERON:0000203!1.03e-14!25;UBERON:0000475!1.34e-14!365;UBERON:0000481!8.17e-14!347;UBERON:0000477!7.98e-13!286;UBERON:0004111!4.09e-12!241;UBERON:0000062!5.65e-12!511;UBERON:0001007!2.66e-10!155;UBERON:0001555!2.66e-10!155;UBERON:0007026!2.66e-10!155;UBERON:0004119!1.79e-09!169;UBERON:0000925!1.79e-09!169;UBERON:0006595!1.79e-09!169;UBERON:0000025!4.23e-09!194;UBERON:0004921!1.85e-08!129;UBERON:0004185!1.85e-08!129;UBERON:0003076!4.63e-08!15;UBERON:0003057!4.63e-08!15;UBERON:0001004!5.28e-08!72;UBERON:0000077!1.90e-07!130;UBERON:0000483!3.48e-07!309;UBERON:0000063!3.93e-07!97;UBERON:0008947!8.72e-07!38;UBERON:0003258!8.72e-07!38;UBERON:0000119!9.91e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.80e-23;22!UBERON:0001950;1.25e-20;20!UBERON:0001869;3.66e-20;32!UBERON:0003528;7.53e-20;34!UBERON:0002020;7.53e-20;34!UBERON:0002791;1.07e-19;32!UBERON:0000956;4.36e-19;25!UBERON:0000203;4.36e-19;25!UBERON:0001893;1.91e-18;34!UBERON:0002780;2.49e-15;41!UBERON:0001890;2.49e-15;41!UBERON:0000073;5.71e-15;53!UBERON:0002616;5.71e-15;53!UBERON:0001017;6.41e-11;75!UBERON:0000955;7.91e-11;68!UBERON:0007023;5.43e-10;114!UBERON:0001016;7.21e-09;83!UBERON:0000200;7.45e-08;6!UBERON:0000065;2.80e-07;44!UBERON:0002021;3.54e-07;5!UBERON:0004733;7.47e-07;12!UBERON:0002028;7.47e-07;12!UBERON:0001872;9.36e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.05e-37,114;UBERON:0001049,2.08e-28,56;UBERON:0005068,2.08e-28,56;UBERON:0006241,2.08e-28,56;UBERON:0007135,2.08e-28,56;UBERON:0011216,8.82e-28,223;UBERON:0000073,4.26e-26,53;UBERON:0002616,4.26e-26,53;UBERON:0003528,8.92e-24,34;UBERON:0002020,8.92e-24,34;UBERON:0001017,2.23e-23,81;UBERON:0000955,6.20e-23,68;UBERON:0006238,6.20e-23,68;UBERON:0001869,6.83e-23,32;UBERON:0002619,1.25e-22,22;UBERON:0001893,3.70e-22,34;UBERON:0002791,3.81e-22,32;UBERON:0001950,1.60e-20,20;UBERON:0002780,2.01e-20,41;UBERON:0001890,2.01e-20,41;UBERON:0003080,2.01e-20,41;UBERON:0006240,2.01e-20,41;UBERON:0003075,1.31e-19,82;UBERON:0007284,1.31e-19,82;UBERON:0001016,3.17e-19,89;UBERON:0000956,5.84e-19,25;UBERON:0000203,5.84e-19,25;UBERON:0002346,6.24e-19,86;UBERON:0010371,8.54e-18,104;UBERON:0004121,1.81e-13,171;UBERON:0000924,1.81e-13,171;UBERON:0006601,1.81e-13,171;UBERON:0003056,1.72e-12,61;UBERON:0004111,1.53e-10,240;UBERON:0010314,5.52e-10,132;UBERON:0000025,1.12e-09,192;UBERON:0004921,1.45e-09,118;UBERON:0001007,2.31e-09,145;UBERON:0001555,2.31e-09,145;UBERON:0007026,2.31e-09,145;UBERON:0003076,3.93e-09,15;UBERON:0003057,3.93e-09,15;UBERON:0004119,8.70e-09,160;UBERON:0000925,8.70e-09,160;UBERON:0006595,8.70e-09,160;UBERON:0000200,7.08e-08,6;UBERON:0008947,7.89e-08,38;UBERON:0003258,7.89e-08,38;UBERON:0002021,3.73e-07,5;UBERON:0004733,6.37e-07,12;UBERON:0002028,6.37e-07,12;UBERON:0007277,6.37e-07,12;UBERON:0001041,6.97e-07,87;UBERON:0001872,9.23e-07,5 | |||
|phase1_expression=0.908391896352783,0.856402095563933,0.281908808191942,1.0007329835313,1.34088328328186,0.872338524100369,0,0,0,0,0,0,0,0.618831764800233,1.98838425436749,0,0,0,0,0.246242116153576,0.204000691244253,0.626909442956176,0.286235987131057,0,0.251085279189606,0.764134057479513,0.57470412614962,0.629686250509434,0,0,0.154816123316076,0,1.204823675113,0.369754010166788,0,1.70603078984906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0.400395987036012,0,0,0.954053754535364,0.569212969109448,0.587237189370939,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.767175371061182,1.0843174571537,0.50133791063589,1.73815822752988,1.5905718941022,2.43317435151318,0.0945348171640679,0,0.351339142772504,1.0478326039817,1.45718115317017,1.48313777113772,0,0,0,0,0,0,0.39752481473341,0,0,1.13061588384802,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0.760272105718513,0.732186172644509,0.735326160691737,0,0.17859945656816,0.44905874525234,0.112611480483322,0,0,0,0,0,1.74437620857014,0.993943903390637,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0.468642863667593,0.312160076830321,0,0.597794722207204,0.117434498643765,0.161872944368132,0,0.61246251376468,0.368502951935304,2.27316718586684,0,0.247266929278557,0,0,0.336672227908132,0.250237039743928,1.93944880838928,0,0,0.150238058906597,0,0,0,0.211931901159562,0.300091096084402,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,0,0,0.169560592310488,0.193260853163297,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0.464367928031979,0,2.12952240071719,1.01150814046861,1.20505514941741,1.98529150918309,1.08939722046203,1.18635309555548,1.61797569792197,1.37355025587742,1.15424147083917,0,0,0,0,8.87285243752816,6.87979051674338,12.4065880403095,0,1.35287282397425,0.343135620597051,1.20725313949488,1.1240175325762,1.70899253099772,1.01847289674383,0.651616610620649,0,0,0.231860809950154,0.234817388471643,0.144366447761074,0,0.190254152234598,0.790204397959275,0.858486162094873,0,0,0,0,0.335964256397719,0.567100388969546,1.70161193135412,1.16253575405585,0,0,0,0.621984346622316,0.144119953416961,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,2.01019518401218,0,0,0,0,1.71768088406796,0.500170521059677,0.271265023699736,0.415941723061614,1.07057393278297,1.41932173530541,1.99140405487612,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0.106727557803444,0,0,0,1.73675465473144,1.07423381301644,0.561320188866147,0.896974044789907,0,0.482561763430822,0,0.154209693802656,0,0.0821271560138091,0,0,0.483437798366489,0.200506470303285,2.4861867012692,0,0,0,0,0.308061348417659,1.56869953835371,1.46139224653261,0.422206515571503,0,0.340187410553031,0,0,0,0,1.27438136522519,0.831076008928724,1.11937377361089,1.53481913652154,1.0457418040996,0.512900250232778,0.656029291399411,0.650756789328606,2.7821073144885,1.19040304263846,0.990113999047056,0.574265537996172,0.650060246036521,1.6068392984416,0.193341436584244,0,0,0,0,0.145016693914229,0,0.178064071293475,1.32227932288782,2.49847087574638,0.510450849978337,1.6185244936888,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,1.26664581178598,0.658589785919804,0.379473173765715,0,1.15466535270614,1.34060455107157,0,3.29503302718727,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,2.35012956480441,0,4.16568367167754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,4.10222901961303,0,0,3.69376990848337,0.23874448473769,0,0,0.994147647766298,6.18945432206256,0,0,0.211125408127993,2.78947183551498,1.65770349318689,0.251932747854276,0.306806047506464,0.123084805461069,0.311039587661807,0,2.14825409610731,0,1.479651084554,0,0,8.72399471485697,6.49376687132959,5.98841394003583,0,1.39935999993913,5.07499702804355,4.66553137970549,1.27126825146383,3.30942754475111,2.06846023944879,2.33283690706603,2.60437492399938,0.885741385813839,4.70326110639091,15.2581736317083,28.9717661019809,23.6438095162838,7.02033270892712,3.59496929612668,5.57694977114413,1.61595542857974,0,1.84451123510448,0,0,0.957003479195758,0.457987967009312,0.533034776018635,0,0,0,0.451191321234361,0,0.167821586975843,1.51802986179348,0.317873157960757,0.210998064528027,1.30586246527318,0.282706142867882,0,1.99052386215701,1.94606641907346,0,0,0,0.104421949505455,0.808813595768125,0.802577647298789,0.937057782901357,0.182454789215666,2.93496928398135,0.242780379534093,7.10251925128903,1.20990716048664,9.79432837217568,2.46427660551103,0.450970258243478,0.414752765588989,0.664653872707185,0,0,0,0.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| ||
|short_description=p4@SYBU | |||
}} | }} |
Latest revision as of 03:59, 25 September 2015
Short description: | p4@SYBU |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SYBU_5end |
Coexpression cluster: | C4718_cerebellum_pancreas_occipital_pharyngeal_Hepatocyte_cervical_rectal |
Association with transcript: | 47bp_to_ENST00000531284_5end |
EntrezGene: | SYBU |
HGNC: | 26011 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.69e-08 | 106 |