FFCP PHASE1:Hg19::chr9:101471297..101471308,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:101471297..101471308,- to FFCP PHASE1:Hg19::chr9:101471297..101471308,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9568 | |EntrezGene=9568 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4507 | |HGNC=4507 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-122bp_to_uc004ays.2_5end | |||
|cluster_id=chr9:101471297..101471308,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_GABBR2_5end | |||
|id=chr9:101471297..101471308,- | |||
|ontology_enrichment_celltype=CL:1000413!1.33e-08!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.63e-15;82!UBERON:0006215;2.06e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.57e-45!69;UBERON:0006238!1.57e-45!69;UBERON:0001017!7.41e-45!82;UBERON:0005743!3.09e-44!86;UBERON:0002619!5.14e-43!22;UBERON:0001049!1.73e-41!57;UBERON:0005068!1.73e-41!57;UBERON:0006241!1.73e-41!57;UBERON:0007135!1.73e-41!57;UBERON:0001950!4.93e-39!20;UBERON:0000073!7.53e-39!94;UBERON:0001016!7.53e-39!94;UBERON:0002780!1.93e-38!41;UBERON:0001890!1.93e-38!41;UBERON:0006240!1.93e-38!41;UBERON:0001893!1.19e-37!34;UBERON:0002616!2.07e-37!59;UBERON:0003080!2.45e-37!42;UBERON:0000956!2.87e-37!25;UBERON:0000203!2.87e-37!25;UBERON:0002020!3.50e-37!34;UBERON:0003528!3.50e-37!34;UBERON:0001869!4.15e-37!32;UBERON:0002791!1.39e-35!33;UBERON:0003075!3.80e-34!86;UBERON:0007284!3.80e-34!86;UBERON:0002346!4.20e-32!90;UBERON:0003056!1.06e-28!61;UBERON:0000033!1.30e-28!123;UBERON:0000153!1.12e-26!129;UBERON:0007811!1.12e-26!129;UBERON:0007023!6.79e-22!115;UBERON:0000025!3.90e-21!194;UBERON:0004121!4.05e-20!169;UBERON:0000924!2.39e-19!173;UBERON:0006601!2.39e-19!173;UBERON:0004111!8.29e-16!241;UBERON:0000200!4.97e-15!6;UBERON:0000483!5.21e-15!309;UBERON:0000119!1.05e-14!312;UBERON:0001871!1.22e-14!7;UBERON:0000477!7.59e-14!286;UBERON:0002021!1.27e-12!5;UBERON:0000349!4.21e-12!5;UBERON:0000475!1.84e-11!365;UBERON:0003915!1.33e-08!9;UBERON:0004700!1.33e-08!9;UBERON:0001917!1.33e-08!9;UBERON:0001872!1.55e-08!5;UBERON:0002771!3.19e-08!3;UBERON:0000064!8.42e-08!219;UBERON:0000988!3.29e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.60e-85;20!UBERON:0002619;2.45e-77;22!UBERON:0000956;4.47e-68;25!UBERON:0000203;4.47e-68;25!UBERON:0001869;1.49e-59;32!UBERON:0001893;2.28e-57;34!UBERON:0002791;3.30e-52;32!UBERON:0003528;2.04e-49;34!UBERON:0002020;2.04e-49;34!UBERON:0000200;1.11e-42;6!UBERON:0002780;2.66e-36;41!UBERON:0001890;2.66e-36;41!UBERON:0000073;1.33e-29;53!UBERON:0002616;1.33e-29;53!UBERON:0000955;1.91e-27;68!UBERON:0001017;1.97e-25;75!UBERON:0001872;8.97e-24;5!UBERON:0002021;2.27e-23;5!UBERON:0001870;5.38e-22;3!UBERON:0001016;2.67e-17;83!UBERON:0001871;5.61e-17;6!UBERON:0002771;2.41e-15;2!UBERON:0002702;3.71e-15;2!UBERON:0007023;1.81e-10;114!UBERON:0011216;4.08e-09;132!UBERON:0002581;6.50e-09;1!UBERON:0002902;6.50e-09;1!UBERON:0009899;6.50e-09;1!UBERON:0001882;1.37e-08;1!UBERON:0002022;1.37e-08;1!UBERON:0007190;1.37e-08;1!UBERON:0005403;1.37e-08;1!UBERON:0003112;2.84e-08;1!UBERON:0011158;2.84e-08;1!UBERON:0003128;2.84e-08;1!UBERON:0001703;2.84e-08;1!UBERON:0002241;2.84e-08;1!UBERON:0000349;8.90e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,5.04e-85,20;UBERON:0002619,2.23e-77,22;UBERON:0000956,4.11e-68,25;UBERON:0000203,4.11e-68,25;UBERON:0001869,1.70e-67,32;UBERON:0001893,1.89e-63,34;UBERON:0002791,5.49e-60,32;UBERON:0002780,1.66e-58,41;UBERON:0001890,1.66e-58,41;UBERON:0003080,1.66e-58,41;UBERON:0006240,1.66e-58,41;UBERON:0003528,2.23e-56,34;UBERON:0002020,2.23e-56,34;UBERON:0000955,4.36e-55,68;UBERON:0006238,4.36e-55,68;UBERON:0000073,6.58e-55,53;UBERON:0002616,6.58e-55,53;UBERON:0001049,8.05e-52,56;UBERON:0005068,8.05e-52,56;UBERON:0006241,8.05e-52,56;UBERON:0007135,8.05e-52,56;UBERON:0001017,6.54e-50,81;UBERON:0001016,1.27e-44,89;UBERON:0000200,9.63e-43,6;UBERON:0003056,1.68e-38,61;UBERON:0003075,2.14e-34,82;UBERON:0007284,2.14e-34,82;UBERON:0002346,1.23e-32,86;UBERON:0007023,3.26e-32,114;UBERON:0010371,2.22e-26,104;UBERON:0001872,1.20e-23,5;UBERON:0002021,2.40e-23,5;UBERON:0010314,3.49e-22,132;UBERON:0001870,3.76e-22,3;UBERON:0004121,1.37e-21,171;UBERON:0000924,1.37e-21,171;UBERON:0006601,1.37e-21,171;UBERON:0011216,4.45e-17,223;UBERON:0001871,5.85e-17,6;UBERON:0002771,2.78e-15,2;UBERON:0002702,2.99e-15,2;UBERON:0000025,5.35e-14,192;UBERON:0004111,2.19e-10,240;UBERON:0002902,6.03e-09,1;UBERON:0009899,6.03e-09,1;UBERON:0002581,7.56e-09,1;UBERON:0002022,1.02e-08,1;UBERON:0007190,1.10e-08,1;UBERON:0001882,1.84e-08,1;UBERON:0005403,1.84e-08,1;UBERON:0003112,2.29e-08,1;UBERON:0011158,2.29e-08,1;UBERON:0003128,2.29e-08,1;UBERON:0001703,2.29e-08,1;UBERON:0002241,2.29e-08,1;UBERON:0004761,2.29e-08,1;UBERON:0009617,2.29e-08,1;UBERON:0000483,2.94e-07,306;UBERON:0000119,3.80e-07,309;UBERON:0000349,9.70e-07,5 | |||
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| ||
|short_description=p5@GABBR2 | |||
}} | }} |
Latest revision as of 19:08, 19 September 2015
Short description: | p5@GABBR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GABBR2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -122bp_to_uc004ays.2_5end |
EntrezGene: | GABBR2 |
HGNC: | 4507 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data