FFCP PHASE1:Hg19::chr9:114361919..114361935,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:114361919..114361935,- to FFCP PHASE1:Hg19::chr9:114361919..114361935,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22949 | |EntrezGene=22949 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18429 | |HGNC=18429 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JVP2 | |UniProt=Q5JVP2 | ||
|association_with_transcript=39bp_to_ENST00000422125_5end | |||
|cluster_id=chr9:114361919..114361935,- | |||
|description=CAGE_peak_1_at_PTGR1_5end | |||
|id=chr9:114361919..114361935,- | |||
|ontology_enrichment_celltype=CL:0000066!2.91e-25!254;CL:0000220!6.47e-23!246;CL:0002321!1.91e-22!248;CL:0000222!3.01e-19!119;CL:0000548!2.91e-14!679;CL:0000004!2.91e-14!679;CL:0000255!2.91e-14!679;CL:0000012!2.47e-13!682;CL:0000076!4.80e-13!62;CL:0000055!2.60e-12!180;CL:0000213!7.25e-11!57;CL:0000215!7.25e-11!57;CL:0000057!3.79e-10!75;CL:0000680!6.72e-09!57;CL:0000056!6.72e-09!57;CL:0000355!6.72e-09!57;CL:0000187!2.71e-08!54;CL:0000223!6.61e-08!59;CL:0000183!6.90e-08!59;CL:0000077!7.78e-08!19;CL:0000063!1.14e-07!578;CL:0002139!1.66e-07!24;CL:0000192!2.13e-07!42;CL:0000514!2.13e-07!42;CL:0000144!3.18e-07!625;CL:0000071!4.43e-07!18;CL:0002546!4.43e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000077;7.43e-08;19!CL:0002139;1.63e-07;24!CL:0000071;4.08e-07;18!CL:0000076;5.97e-07;63!CL:0000213;8.70e-07;58!CL:0000215;8.70e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.35e-25,253;CL:0002321,2.16e-22,250;CL:0000222,2.50e-19,121;CL:0000076,1.64e-13,63;CL:0000213,5.21e-11,58;CL:0000215,5.21e-11,58;CL:0000057,3.63e-10,76;CL:0000680,8.14e-09,58;CL:0000056,8.14e-09,58;CL:0000355,8.14e-09,58;CL:0000187,3.28e-08,55;CL:0000077,7.38e-08,19;CL:0000223,1.57e-07,58;CL:0002139,1.58e-07,24;CL:0000192,2.68e-07,43;CL:0000514,2.68e-07,43;CL:0000071,4.22e-07,18;CL:0002546,4.22e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;4.08e-07;18 | |||
|ontology_enrichment_disease=DOID:305!1.23e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.76e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0003104!6.82e-21!238;UBERON:0009142!6.82e-21!238;UBERON:0000490!1.64e-20!138;UBERON:0000468!5.18e-20!659;UBERON:0000926!1.16e-19!448;UBERON:0004120!1.16e-19!448;UBERON:0006603!1.16e-19!448;UBERON:0005256!8.54e-19!143;UBERON:0000467!2.71e-18!625;UBERON:0004119!3.35e-18!169;UBERON:0000925!3.35e-18!169;UBERON:0006595!3.35e-18!169;UBERON:0002100!3.93e-18!216;UBERON:0000480!6.42e-18!626;UBERON:0000481!7.41e-18!347;UBERON:0003914!8.58e-18!118;UBERON:0001007!3.27e-17!155;UBERON:0001555!3.27e-17!155;UBERON:0007026!3.27e-17!155;UBERON:0000923!2.81e-14!604;UBERON:0005291!2.81e-14!604;UBERON:0006598!2.81e-14!604;UBERON:0002532!2.81e-14!604;UBERON:0000922!3.58e-14!612;UBERON:0002050!3.73e-14!605;UBERON:0005423!3.73e-14!605;UBERON:0004921!1.78e-12!129;UBERON:0004185!1.78e-12!129;UBERON:0000477!1.39e-11!286;UBERON:0002049!1.39e-11!79;UBERON:0007798!1.39e-11!79;UBERON:0003102!4.98e-11!95;UBERON:0004872!5.33e-11!84;UBERON:0000119!7.94e-11!312;UBERON:0000483!1.21e-10!309;UBERON:0000475!1.52e-10!365;UBERON:0000077!3.15e-10!130;UBERON:0000055!3.58e-10!69;UBERON:0000062!3.61e-10!511;UBERON:0000914!4.39e-10!83;UBERON:0002329!4.39e-10!83;UBERON:0003077!4.39e-10!83;UBERON:0003059!4.39e-10!83;UBERON:0007282!4.39e-10!83;UBERON:0009618!4.39e-10!83;UBERON:0007285!4.39e-10!83;UBERON:0001981!1.11e-09!60;UBERON:0007500!1.11e-09!60;UBERON:0004537!1.11e-09!60;UBERON:0006965!1.11e-09!60;UBERON:0003929!1.51e-09!54;UBERON:0004111!1.76e-09!241;UBERON:0000486!2.33e-09!82;UBERON:0005911!4.18e-09!82;UBERON:0004290!2.24e-08!70;UBERON:0000161!5.74e-08!35;UBERON:0001637!5.95e-08!42;UBERON:0003509!5.95e-08!42;UBERON:0004572!5.95e-08!42;UBERON:0001048!8.48e-08!168;UBERON:0002385!8.83e-08!63;UBERON:0001015!8.83e-08!63;UBERON:0000383!8.83e-08!63;UBERON:0001134!1.76e-07!61;UBERON:0002036!1.76e-07!61;UBERON:0003082!1.76e-07!61;UBERON:0004535!3.22e-07!110;UBERON:0004122!4.06e-07!15;UBERON:0001986!4.43e-07!18;UBERON:0004638!4.43e-07!18;UBERON:0004852!4.43e-07!18;UBERON:0001009!6.94e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.08e-07;18!UBERON:0001986;4.08e-07;18!UBERON:0004852;4.08e-07;18!UBERON:0000490;9.08e-07;33 | |||
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| ||
|short_description=p1@PTGR1 | |||
}} | }} |
Latest revision as of 04:54, 20 September 2015
Short description: | p1@PTGR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PTGR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_ENST00000422125_5end |
EntrezGene: | PTGR1 |
HGNC: | 18429 |
UniProt: | Q5JVP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.35e-25 | 253 |
embryonic cell | 2.16e-22 | 250 |
mesodermal cell | 2.50e-19 | 121 |
squamous epithelial cell | 1.64e-13 | 63 |
lining cell | 5.21e-11 | 58 |
barrier cell | 5.21e-11 | 58 |
fibroblast | 3.63e-10 | 76 |
muscle precursor cell | 8.14e-09 | 58 |
myoblast | 8.14e-09 | 58 |
multi-potent skeletal muscle stem cell | 8.14e-09 | 58 |
muscle cell | 3.28e-08 | 55 |
mesothelial cell | 7.38e-08 | 19 |
endodermal cell | 1.57e-07 | 58 |
endothelial cell of vascular tree | 1.58e-07 | 24 |
smooth muscle cell | 2.68e-07 | 43 |
smooth muscle myoblast | 2.68e-07 | 43 |
blood vessel endothelial cell | 4.22e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.22e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.76e-07 | 106 |