FFCP PHASE1:Mm9::chrX:40782205..40782227,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chrX:40782205..40782227,- to FFCP PHASE1:Mm9::chrX:40782205..40782227,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=23963 | |EntrezGene=23963 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-25bp_to_ENSMUST00000125231,ENSMUST00000154433_5end | |||
|cluster_id=chrX:40782205..40782227,- | |||
|description=CAGE_peak_3_at_Odz1_5end | |||
|id=chrX:40782205..40782227,- | |||
|ontology_enrichment_celltype=CL:0000117!9.39e-18!23;CL:0000337!9.39e-18!23;CL:0000540!2.89e-11!33;CL:0000047!2.89e-11!33;CL:0000031!2.89e-11!33;CL:0000404!2.89e-11!33;CL:0000393!3.53e-08!39;CL:0000211!3.53e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.91e-27,23;CL:0000337,4.91e-27,23;CL:0000540,9.45e-17,33;CL:0000047,9.45e-17,33;CL:0000031,9.45e-17,33;CL:0000404,9.45e-17,33;CL:0000393,3.71e-13,39;CL:0000211,3.71e-13,39;CL:0002319,2.46e-11,43;CL:0000221,6.19e-11,44;CL:0000133,6.19e-11,44;CL:0002609,2.70e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.58e-28!52;UBERON:0005068!2.58e-28!52;UBERON:0006241!2.58e-28!52;UBERON:0007135!2.58e-28!52;UBERON:0000955!1.12e-26!50;UBERON:0006238!1.12e-26!50;UBERON:0002616!6.96e-26!49;UBERON:0002346!1.21e-25!71;UBERON:0003075!1.21e-25!71;UBERON:0007284!1.21e-25!71;UBERON:0001017!2.19e-25!73;UBERON:0005743!2.19e-25!73;UBERON:0000033!3.18e-25!63;UBERON:0002020!2.28e-24!34;UBERON:0000073!3.94e-24!75;UBERON:0001016!3.94e-24!75;UBERON:0003056!2.58e-23!49;UBERON:0003080!6.90e-22!40;UBERON:0002780!4.83e-21!39;UBERON:0001890!4.83e-21!39;UBERON:0006240!4.83e-21!39;UBERON:0002791!3.14e-20!29;UBERON:0003528!3.14e-20!29;UBERON:0001893!3.14e-20!29;UBERON:0004121!7.25e-20!102;UBERON:0000924!7.25e-20!102;UBERON:0006601!7.25e-20!102;UBERON:0000956!3.82e-14!21;UBERON:0001869!3.82e-14!21;UBERON:0000203!3.82e-14!21;UBERON:0007811!5.79e-14!86;UBERON:0000153!3.87e-13!94;UBERON:0002619!2.13e-11!17;UBERON:0002021!2.94e-10!10;UBERON:0000411!2.94e-10!10;UBERON:0001950!2.94e-10!10;UBERON:0002420!2.75e-07!8;UBERON:0007245!2.75e-07!8;UBERON:0010009!2.75e-07!8;UBERON:0010011!2.75e-07!8;UBERON:0000454!2.75e-07!8;UBERON:0003076!6.82e-07!12;UBERON:0003057!6.82e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.33e-44,54;UBERON:0001049,2.71e-41,52;UBERON:0005068,2.71e-41,52;UBERON:0006241,2.71e-41,52;UBERON:0007135,2.71e-41,52;UBERON:0002020,2.82e-38,34;UBERON:0001017,3.58e-38,73;UBERON:0001016,8.78e-37,75;UBERON:0000955,1.11e-34,47;UBERON:0006238,1.11e-34,47;UBERON:0002616,1.78e-33,46;UBERON:0003528,1.02e-31,29;UBERON:0002791,1.02e-31,29;UBERON:0001893,1.02e-31,29;UBERON:0002346,3.39e-31,64;UBERON:0003075,3.39e-31,64;UBERON:0007284,3.39e-31,64;UBERON:0003080,1.53e-30,40;UBERON:0002780,3.07e-29,39;UBERON:0001890,3.07e-29,39;UBERON:0006240,3.07e-29,39;UBERON:0004121,4.10e-26,95;UBERON:0000924,4.10e-26,95;UBERON:0006601,4.10e-26,95;UBERON:0010371,8.09e-26,73;UBERON:0003056,4.10e-23,49;UBERON:0000956,4.35e-22,21;UBERON:0001869,4.35e-22,21;UBERON:0000203,4.35e-22,21;UBERON:0010314,5.77e-18,92;UBERON:0002619,9.50e-18,17;UBERON:0002021,3.14e-15,10;UBERON:0000411,3.14e-15,10;UBERON:0001950,3.14e-15,10;UBERON:0000025,3.22e-12,114;UBERON:0004111,1.15e-10,122;UBERON:0003076,1.36e-10,12;UBERON:0003057,1.36e-10,12;UBERON:0002420,1.44e-10,8;UBERON:0007245,1.44e-10,8;UBERON:0010009,1.44e-10,8;UBERON:0010011,1.44e-10,8;UBERON:0000454,1.44e-10,8;UBERON:0002240,1.20e-08,6;UBERON:0005174,1.20e-08,6;UBERON:0001137,1.20e-08,6;UBERON:0000369,1.43e-07,5;UBERON:0002435,1.43e-07,5;UBERON:0000204,1.43e-07,5;UBERON:0010082,1.43e-07,5;UBERON:0001948,1.63e-07,5;UBERON:0002315,1.63e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,3.70293685490423,1.26766280701236,0,0,0,0,0,0,0,1.76272340924412,1.35005938331691,2.94454945891935,2.57085885963423,1.76694832761291,2.32732518508413,1.82106394934649,1.83843757322004,3.30347642998166,4.85211884723713,5.22262213071228,3.29715719325485,3.47653045689157,3.64639359389732,1.11673199600552,3.37657566019008,4.12555268997387,7.95497180778903,8.25755748634797,2.23679334990361,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0.608930956624282,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,19.9090941967852,22.4107976290397,0,0,0,0,4.19413790333504,3.20250421973039,7.91622418311046,7.30062144807561,7.92717917724025,4.36354893575076,4.86723789203273,0.305518091550949,0,0,0.420883711772948,0.130120442962704,0.229902104433473,0,0.60281927134286,0.476255494059295,0.384341160854549,0.468508622798644,0.258703370739016,0,0.189106080167819,0.175951124163949,0,1.66828349535359,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.51898840548794,3.08713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,1.40654023910644,0,0,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0,3.21321316421807,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,1.36175842301515,0,0,0,1.41872186913819,0.356737635204141,0.822745103010605,0.304464949114599,0,0,0,0,0,0,0,0,0.291480836629851,3.33765543618917,0,0.412773735926445,0,0,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0.337912250981556,0.234714477291508,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,5.06357760157895,5.72895513439397,9.79563139359019,4.11049511862385,6.0431511791176,7.42524750254986,6.30449684513909,4.98456649882625,4.65984280576638,0,0.798049746802062,0,0.972426868273176,0.419226325255965,0.551530525350042,0.888986911206461,0.412070114477788,0.962757628775446,2.27427490587418,0.50695859978048,0.943131706930381,1.21733959710847,1.53660365771686,1.7230640686684,0.952587382566147,1.15884325944855,0.578727661391115,0.824171801606613,1.17759136107518,1.71434626192708,0.887379030796687,1.66905332963125,1.30811774969096,1.50575008664529,1.4384483341585,1.46342378298218,0.263069711437843,0.950628796921032,0,0.830445126869219,1.28055827088233,1.22769312950907,1.39443157067369,1.35034627686799,0.749431733813838,0.467863216890817,0.644613162144895,0,0.441182838239031,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,3.70293685490423,1.26766280701236,0,0,0,0,0,0,0,1.76272340924412,1.35005938331691,2.94454945891935,2.57085885963423,1.76694832761291,2.32732518508413,1.82106394934649,1.83843757322004,3.30347642998166,4.85211884723713,5.22262213071228,3.29715719325485,3.47653045689157,3.64639359389732,1.11673199600552,3.37657566019008,4.12555268997387,7.95497180778903,8.25755748634797,2.23679334990361,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0.608930956624282,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,19.9090941967852,22.4107976290397,0,0,0,0,4.19413790333504,3.20250421973039,7.91622418311046,7.30062144807561,7.92717917724025,4.36354893575076,4.86723789203273,0.305518091550949,0,0,0.420883711772948,0.130120442962704,0.229902104433473,0,0.60281927134286,0.476255494059295,0.384341160854549,0.468508622798644,0.258703370739016,0,0.189106080167819,0.175951124163949,0,1.66828349535359,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.51898840548794,3.08713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,1.40654023910644,0,0,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0,3.21321316421807,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,1.36175842301515,0,0,0,1.41872186913819,0.356737635204141,0.822745103010605,0.304464949114599,0,0,0,0,0,0,0,0,0.291480836629851,3.33765543618917,0,0.412773735926445,0,0,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0.337912250981556,0.234714477291508,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,5.06357760157895,5.72895513439397,9.79563139359019,4.11049511862385,6.0431511791176,7.42524750254986,6.30449684513909,4.98456649882625,4.65984280576638,0,0.798049746802062,0,0.972426868273176,0.419226325255965,0.551530525350042,0.888986911206461,0.412070114477788,0.962757628775446,2.27427490587418,0.50695859978048,0.943131706930381,1.21733959710847,1.53660365771686,1.7230640686684,0.952587382566147,1.15884325944855,0.578727661391115,0.824171801606613,1.17759136107518,1.71434626192708,0.887379030796687,1.66905332963125,1.30811774969096,1.50575008664529,1.4384483341585,1.46342378298218,0.263069711437843,0.950628796921032,0,0.830445126869219,1.28055827088233,1.22769312950907,1.39443157067369,1.35034627686799,0.749431733813838,0.467863216890817,0.644613162144895,0,0.441182838239031,0 | ||
|short_description=p3@Odz1 | |||
}} | }} |
Latest revision as of 20:52, 1 October 2015
Short description: | p3@Odz1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Odz1_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | -25bp_to_ENSMUST00000125231, ENSMUST00000154433_5end |
EntrezGene: | Odz1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.91e-27 | 23 |
neuroblast (sensu Vertebrata) | 4.91e-27 | 23 |
neuron | 9.45e-17 | 33 |
neuronal stem cell | 9.45e-17 | 33 |
neuroblast | 9.45e-17 | 33 |
electrically signaling cell | 9.45e-17 | 33 |
electrically responsive cell | 3.71e-13 | 39 |
electrically active cell | 3.71e-13 | 39 |
neural cell | 2.46e-11 | 43 |
ectodermal cell | 6.19e-11 | 44 |
neurectodermal cell | 6.19e-11 | 44 |
neuron of cerebral cortex | 2.70e-07 | 6 |