FFCP PHASE1:Mm9::chr10:92623569..92623639,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=237459 | |EntrezGene=237459 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K0D0,Q8C5H7 | |UniProt=Q8K0D0,Q8C5H7 | ||
|association_with_transcript=0bp_to_ENSMUST00000069965,NM_146239,uc007guk.2,uc007gul.2_5end | |association_with_transcript=0bp_to_ENSMUST00000069965,NM_146239,uc007guk.2,uc007gul.2_5end | ||
|cluster_id=chr10:92623569..92623639,+ | |||
|description=CAGE_peak_1_at_Cdk17_5end | |description=CAGE_peak_1_at_Cdk17_5end | ||
|id=chr10:92623569..92623639,+ | |id=chr10:92623569..92623639,+ | ||
|ontology_enrichment_celltype=CL:0000221!7.00e-11!44;CL:0000133!7.00e-11!44;CL:0002319!1.42e-10!43;CL:0000540!7.78e-09!33;CL:0000047!7.78e-09!33;CL:0000031!7.78e-09!33;CL:0000404!7.78e-09!33;CL:0000055!1.34e-08!50;CL:0000393!3.12e-07!39;CL:0000211!3.12e-07!39;CL:0000791!6.60e-07!9;CL:0000789!6.60e-07!9;CL:0002420!6.60e-07!9;CL:0002419!6.60e-07!9;CL:0000790!6.60e-07!9 | |ontology_enrichment_celltype=CL:0000221!7.00e-11!44;CL:0000133!7.00e-11!44;CL:0002319!1.42e-10!43;CL:0000540!7.78e-09!33;CL:0000047!7.78e-09!33;CL:0000031!7.78e-09!33;CL:0000404!7.78e-09!33;CL:0000055!1.34e-08!50;CL:0000393!3.12e-07!39;CL:0000211!3.12e-07!39;CL:0000791!6.60e-07!9;CL:0000789!6.60e-07!9;CL:0002420!6.60e-07!9;CL:0002419!6.60e-07!9;CL:0000790!6.60e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,6.99e-11,44;CL:0000133,6.99e-11,44;CL:0002319,1.42e-10,43;CL:0000540,7.77e-09,33;CL:0000047,7.77e-09,33;CL:0000031,7.77e-09,33;CL:0000404,7.77e-09,33;CL:0000393,3.12e-07,39;CL:0000211,3.12e-07,39;CL:0000791,6.60e-07,9;CL:0000789,6.60e-07,9;CL:0002420,6.60e-07,9;CL:0002419,6.60e-07,9;CL:0000790,6.60e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.46e-22!75;UBERON:0001016!5.46e-22!75;UBERON:0001017!3.49e-21!73;UBERON:0005743!3.49e-21!73;UBERON:0007811!6.08e-18!86;UBERON:0000153!7.98e-16!94;UBERON:0001049!1.93e-15!52;UBERON:0005068!1.93e-15!52;UBERON:0006241!1.93e-15!52;UBERON:0007135!1.93e-15!52;UBERON:0000955!8.53e-15!50;UBERON:0006238!8.53e-15!50;UBERON:0002020!2.86e-14!34;UBERON:0002616!3.27e-14!49;UBERON:0002791!1.80e-13!29;UBERON:0003528!1.80e-13!29;UBERON:0001893!1.80e-13!29;UBERON:0003080!1.97e-13!40;UBERON:0002780!3.44e-13!39;UBERON:0001890!3.44e-13!39;UBERON:0006240!3.44e-13!39;UBERON:0000956!1.34e-11!21;UBERON:0001869!1.34e-11!21;UBERON:0000203!1.34e-11!21;UBERON:0004121!2.86e-10!102;UBERON:0000924!2.86e-10!102;UBERON:0006601!2.86e-10!102;UBERON:0002619!1.11e-09!17;UBERON:0000033!1.58e-09!63;UBERON:0002370!3.48e-09!23;UBERON:0000974!3.48e-09!23;UBERON:0004807!3.48e-09!23;UBERON:0005058!3.48e-09!23;UBERON:0003351!3.48e-09!23;UBERON:0009113!3.48e-09!23;UBERON:0003295!3.48e-09!23;UBERON:0009722!3.48e-09!23;UBERON:0005562!3.48e-09!23;UBERON:0007690!3.48e-09!23;UBERON:0002346!1.03e-08!71;UBERON:0003075!1.03e-08!71;UBERON:0007284!1.03e-08!71;UBERON:0003056!1.42e-08!49;UBERON:0000477!1.79e-08!154;UBERON:0003408!2.61e-08!24;UBERON:0006562!2.96e-08!24;UBERON:0001557!2.96e-08!24;UBERON:0001042!2.96e-08!24;UBERON:0008814!2.96e-08!24;UBERON:0009145!2.96e-08!24;UBERON:0002021!1.07e-07!10;UBERON:0000411!1.07e-07!10;UBERON:0001950!1.07e-07!10;UBERON:0004177!1.09e-07!29;UBERON:0000072!6.17e-07!27;UBERON:0000064!8.53e-07!99;UBERON:0000063!9.99e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.45e-22,75;UBERON:0001017,3.49e-21,73;UBERON:0001049,1.92e-15,52;UBERON:0005068,1.92e-15,52;UBERON:0006241,1.92e-15,52;UBERON:0007135,1.92e-15,52;UBERON:0000073,2.86e-15,54;UBERON:0000955,9.59e-15,47;UBERON:0006238,9.59e-15,47;UBERON:0002020,2.85e-14,34;UBERON:0002616,3.71e-14,46;UBERON:0003528,1.80e-13,29;UBERON:0002791,1.80e-13,29;UBERON:0001893,1.80e-13,29;UBERON:0003080,1.97e-13,40;UBERON:0002780,3.44e-13,39;UBERON:0001890,3.44e-13,39;UBERON:0006240,3.44e-13,39;UBERON:0004121,2.00e-12,95;UBERON:0000924,2.00e-12,95;UBERON:0006601,2.00e-12,95;UBERON:0000956,1.34e-11,21;UBERON:0001869,1.34e-11,21;UBERON:0000203,1.34e-11,21;UBERON:0002346,3.33e-11,64;UBERON:0003075,3.33e-11,64;UBERON:0007284,3.33e-11,64;UBERON:0002619,1.11e-09,17;UBERON:0002370,3.48e-09,23;UBERON:0000974,3.48e-09,23;UBERON:0004807,3.48e-09,23;UBERON:0005058,3.48e-09,23;UBERON:0003351,3.48e-09,23;UBERON:0009113,3.48e-09,23;UBERON:0003295,3.48e-09,23;UBERON:0009722,3.48e-09,23;UBERON:0005562,3.48e-09,23;UBERON:0007690,3.48e-09,23;UBERON:0010371,6.11e-09,73;UBERON:0003056,1.42e-08,49;UBERON:0003408,2.61e-08,24;UBERON:0006562,2.96e-08,24;UBERON:0001557,2.96e-08,24;UBERON:0001042,2.96e-08,24;UBERON:0008814,2.96e-08,24;UBERON:0009145,2.96e-08,24;UBERON:0002021,1.07e-07,10;UBERON:0000411,1.07e-07,10;UBERON:0001950,1.07e-07,10;UBERON:0004177,1.09e-07,29;UBERON:0005057,1.09e-07,29;UBERON:0000072,6.17e-07,27 | |||
|phase1_expression=13.2923543096979,1.04692622291808,0.454999239389536,0.30246421130683,0.500895729946347,1.17515490338323,1.63528848416868,88.5785998809213,719.993525083624,621.675381911215,209.913229044469,129.470214049431,66.2546824833766,65.740142619086,3.33109761815663,7.08663435864391,2.79824751251259,17.0349569293448,16.5908464662944,13.580468857537,26.9587229778891,9.4326403640841,7.57479388502913,3.03985603307473,1.60586496747019,0.57423196411502,1.29228598847722,1.29282739611533,1.14014051673824,1.26015064879965,1.55211357458713,8.25539875497521,6.1506478758457,0,0.866554859253824,0.664938581433969,0.204169356262369,4.18531630736908,5.4693474116666,2.09409497589519,2.35292595212406,2.04913645487534,3.39857247121808,4.28049181116963,7.50189291024408,10.6457116253775,6.25913075478431,23.3286917327078,10.7646229539891,12.2490836416799,12.8787507895334,17.2503077237966,33.724303817605,147.973876970314,126.035174678424,9.77585856936598,4.87106847895886,5.15672092277442,18.613114399083,21.1596391708813,16.4796164911607,7.45457970552091,5.33576877666684,2.6996991518442,1.97773272513395,1.4209602298922,10.1864037576258,20.7477884873639,31.8327109787026,28.2162411113233,35.3345935070322,10.5690864229407,13.693849539,26.8254850280749,23.9613677545591,23.8996884518605,4.40463523997555,30.1342117881043,17.664751324468,19.2553980086083,18.2060410768795,16.6692278578163,5.30447698102624,16.8828783009504,28.8788688298171,14.142172102736,15.5185132071022,16.2167517868012,25.8226319266158,16.7013147835996,17.971598299504,5.16254326188832,7.47968467078526,1.07940638327563,1.94932925234301,4.48026887097336,8.84799846830037,11.0779709675738,8.57293815189467,9.18682893726885,17.7462708918617,12.8326477414318,7.64415719119937,14.2213340630666,5.62876706629157,7.85415582972806,4.54972000513305,7.4219521817389,22.2686579936568,4.75014845007439,5.89850111004862,6.08930956624282,2.7673859670727,4.06951129492081,9.40709657085639,3.14166478324189,1.73036477414062,9.10975948595443,7.07688441559899,9.38247729694973,7.72945314611377,4.84875253135222,5.59175283654366,17.8596286177044,22.8296910426666,4.08731288333746,44.6910414407083,16.7972764678154,27.447169047782,15.2786452192919,161.040212192157,52.5235191831773,129.151469902861,157.009290800823,38.8563643326377,89.8816597395377,10.6931332042832,7.96204611904595,7.32895999457657,2.73574412652416,6.63614259109789,3.67843367093557,3.42118046630164,5.87748789559289,6.5995404176788,3.97152532883034,5.43470002446427,5.43277078551933,1.94011193639558,6.05139456537022,5.98233822157426,7.01426343768239,6.67313398141435,7.3132954969655,4.93877127379064,4.97585667046233,10.5331978096985,10.0365683774739,14.7765019685708,4.76389276831654,6.80125573945179,6.30217215113552,7.81257627431194,5.70616272067471,6.47921874126989,6.74348439776183,3.75582761959467,12.6106569756543,7.73431294593358,11.1633875573785,7.53939928776458,5.55559952216263,4.17145219052996,7.38135303182045,112.715412430372,34.6788543718189,4.95628174475697,0.528901133327089,4.47905326123991,7.89604684325491,6.05677068213839,4.84040459096022,3.33567065767305,4.75564065281398,3.32170343081158,4.77626968699632,7.79139147280835,6.96347652144028,6.62877896205008,5.39291645192533,1.94524244887225,3.98282546508734,2.84501851429623,4.68418901699888,5.63538678365402,5.29493452397817,4.46090720485539,8.90724912607046,6.26041717530147,2.80459281161244,2.35498091762062,4.31890073726302,2.96452627087149,2.33583148002532,1.96558995113203,1.57403478669398,2.43432145666204,2.41177159752417,1.52775511068852,2.5892652370573,8.59316701907687,1.92192989231657,17.2521847832825,10.7920874823866,6.86482880852033,4.2938409251009,3.58794827043824,3.37710464954357,7.02062122633098,5.68474235311454,6.51859905768104,7.80827394565865,5.86725620721255,8.20780661464897,5.71304738126433,12.0982861671835,7.25121662888479,11.7376285513851,10.8429242687091,7.53771247692395,7.08008425650172,7.66640010482011,1.50791283939272,6.52686820582452,3.44234991113325,6.34654516500885,11.3990918891332,9.49414661396846,6.06559297893699,7.82659874333556,11.042787679569,11.3227235846025,13.5716740571663,22.4630670075399,25.6218475194753,30.0061122636162,19.8357243820698,12.5670018901864,17.392662229647,127.243241303036,11.071326646245,5.1639025063504,11.5649741141039,14.5173708215831,27.8764790513922,5.34117399540959,5.44182402536552,5.46954731292105,4.42952839321159,9.22305443831782,24.2922595578128,14.5413491791002,13.9033977570041,18.0140952023415,22.1379078007497,13.4076206222643,10.8940673841212,5.94201610303324,5.82114077022395,10.2881776815164,10.1083933176096,7.66985915688903,9.70839221552514,14.3098526083862,7.04015124191131,4.44847348814022,3.52845436887939,3.2977250588296,6.13564821444441,5.06628569396509,4.41677672811605,4.76008609260678,3.78925087618806,14.6485988588303,7.51831875510552,8.66824845445534,6.11141940320049,6.40452753815949,7.92826520781946,9.37990510146743,129.863520515305,81.451745252369,112.494778676801,5.72802370809068,6.01038387804157,7.92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| ||
|short_description=p1@Cdk17 | |short_description=p1@Cdk17 | ||
}} | }} |
Latest revision as of 14:21, 26 September 2015
Short description: | p1@Cdk17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cdk17_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 0bp_to_ENSMUST00000069965, NM_146239, uc007guk.2, uc007gul.2_5end |
EntrezGene: | Cdk17 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 6.99e-11 | 44 |
neurectodermal cell | 6.99e-11 | 44 |
neural cell | 1.42e-10 | 43 |
neuron | 7.77e-09 | 33 |
neuronal stem cell | 7.77e-09 | 33 |
neuroblast | 7.77e-09 | 33 |
electrically signaling cell | 7.77e-09 | 33 |
electrically responsive cell | 3.12e-07 | 39 |
electrically active cell | 3.12e-07 | 39 |
mature alpha-beta T cell | 6.60e-07 | 9 |
alpha-beta T cell | 6.60e-07 | 9 |
immature T cell | 6.60e-07 | 9 |
mature T cell | 6.60e-07 | 9 |
immature alpha-beta T cell | 6.60e-07 | 9 |