FFCP PHASE1:Hg19::chr12:107168486..107168499,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55188 | |EntrezGene=55188 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25555 | |HGNC=25555 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000462949_5end | |association_with_transcript=0bp_to_ENST00000462949_5end | ||
|cluster_id=chr12:107168486..107168499,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_5_at_RIC8B_5end | |description=CAGE_peak_5_at_RIC8B_5end | ||
|id=chr12:107168486..107168499,+ | |id=chr12:107168486..107168499,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.83e-12;2!UBERON:0006601;3.25e-08;82!UBERON:0006222;9.14e-07;1 | |||
|ontology_enrichment_disease=DOID:305!3.19e-17!106;DOID:0050687!6.57e-14!143;DOID:162!7.91e-09!235;DOID:14566!4.21e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.72e-20!57;UBERON:0005068!8.72e-20!57;UBERON:0006241!8.72e-20!57;UBERON:0007135!8.72e-20!57;UBERON:0002780!4.74e-19!41;UBERON:0001890!4.74e-19!41;UBERON:0006240!4.74e-19!41;UBERON:0003080!2.90e-18!42;UBERON:0001017!6.87e-18!82;UBERON:0000955!8.76e-18!69;UBERON:0006238!8.76e-18!69;UBERON:0002616!1.78e-17!59;UBERON:0005743!3.77e-17!86;UBERON:0001869!3.88e-16!32;UBERON:0000073!1.60e-15!94;UBERON:0001016!1.60e-15!94;UBERON:0001893!1.74e-15!34;UBERON:0002791!1.05e-14!33;UBERON:0002020!2.79e-14!34;UBERON:0003528!2.79e-14!34;UBERON:0007023!2.93e-14!115;UBERON:0003075!7.73e-13!86;UBERON:0007284!7.73e-13!86;UBERON:0002346!2.69e-12!90;UBERON:0003056!4.22e-12!61;UBERON:0002619!9.82e-11!22;UBERON:0000956!2.59e-10!25;UBERON:0000203!2.59e-10!25;UBERON:0000153!9.47e-10!129;UBERON:0007811!9.47e-10!129;UBERON:0001950!1.57e-09!20;UBERON:0000033!8.56e-09!123;UBERON:0004121!1.24e-08!169;UBERON:0000924!1.90e-08!173;UBERON:0006601!1.90e-08!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;7.21e-39;32!UBERON:0001893;1.99e-36;34!UBERON:0002791;4.76e-34;32!UBERON:0003528;2.30e-30;34!UBERON:0002020;2.30e-30;34!UBERON:0002780;2.55e-29;41!UBERON:0001890;2.55e-29;41!UBERON:0009663;1.08e-27;7!UBERON:0000369;1.16e-22;4!UBERON:0002435;1.16e-22;4!UBERON:0000204;1.16e-22;4!UBERON:0001950;2.36e-22;20!UBERON:0002420;2.05e-21;9!UBERON:0000125;2.05e-21;9!UBERON:0007245;2.05e-21;9!UBERON:0002308;2.05e-21;9!UBERON:0010009;2.05e-21;9!UBERON:0010011;2.05e-21;9!UBERON:0000454;2.05e-21;9!UBERON:0002619;2.98e-20;22!UBERON:0000956;1.05e-17;25!UBERON:0000203;1.05e-17;25!UBERON:0005383;1.88e-17;3!UBERON:0005382;1.88e-17;3!UBERON:0000073;3.26e-17;53!UBERON:0002616;3.26e-17;53!UBERON:0001017;4.34e-15;75!UBERON:0000955;9.66e-15;68!UBERON:0001873;2.83e-12;2!UBERON:0001875;1.62e-11;2!UBERON:0006514;1.62e-11;2!UBERON:0001016;2.87e-10;83!UBERON:0001872;8.08e-10;5!UBERON:0002021;8.08e-10;5!UBERON:0000200;4.18e-08;6!UBERON:0001882;6.22e-07;1!UBERON:0005403;6.22e-07;1!UBERON:0001874;6.95e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,8.33e-42,32;UBERON:0002780,1.03e-40,41;UBERON:0001890,1.03e-40,41;UBERON:0003080,1.03e-40,41;UBERON:0006240,1.03e-40,41;UBERON:0001893,3.37e-39,34;UBERON:0002791,5.64e-37,32;UBERON:0003528,1.17e-34,34;UBERON:0002020,1.17e-34,34;UBERON:0000073,2.41e-34,53;UBERON:0002616,2.41e-34,53;UBERON:0001049,2.69e-32,56;UBERON:0005068,2.69e-32,56;UBERON:0006241,2.69e-32,56;UBERON:0007135,2.69e-32,56;UBERON:0003056,3.53e-29,61;UBERON:0001017,3.96e-28,81;UBERON:0009663,7.70e-28,7;UBERON:0000955,1.86e-25,68;UBERON:0006238,1.86e-25,68;UBERON:0001016,7.14e-25,89;UBERON:0003075,4.53e-23,82;UBERON:0007284,4.53e-23,82;UBERON:0000369,1.23e-22,4;UBERON:0002435,1.23e-22,4;UBERON:0000204,1.23e-22,4;UBERON:0010082,1.23e-22,4;UBERON:0001950,2.37e-22,20;UBERON:0002346,8.59e-22,86;UBERON:0002420,1.58e-21,9;UBERON:0000125,1.58e-21,9;UBERON:0007245,1.58e-21,9;UBERON:0002308,1.58e-21,9;UBERON:0010009,1.58e-21,9;UBERON:0010011,1.58e-21,9;UBERON:0000454,1.58e-21,9;UBERON:0002619,2.99e-20,22;UBERON:0010371,4.32e-19,104;UBERON:0007023,4.55e-19,114;UBERON:0000956,1.05e-17,25;UBERON:0000203,1.05e-17,25;UBERON:0005383,2.00e-17,3;UBERON:0005382,2.00e-17,3;UBERON:0010314,4.22e-14,132;UBERON:0004121,3.71e-13,171;UBERON:0000924,3.71e-13,171;UBERON:0006601,3.71e-13,171;UBERON:0001873,2.84e-12,2;UBERON:0010122,2.84e-12,2;UBERON:0001875,1.04e-11,2;UBERON:0006514,1.04e-11,2;UBERON:0000025,2.75e-10,192;UBERON:0001872,6.35e-10,5;UBERON:0002021,1.13e-09,5;UBERON:0000200,4.63e-08,6;UBERON:0011216,5.62e-08,223;UBERON:0000483,2.89e-07,306;UBERON:0004111,3.20e-07,240;UBERON:0000119,3.87e-07,309;UBERON:0001882,6.23e-07,1;UBERON:0005403,6.23e-07,1;UBERON:0001874,7.35e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0.157421562627358,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506039384039006,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.756278537312543,0,0.263504357079378,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.450445921933289,1.53316637465883,0,0,0,0,0,0,0,0.397227542439656,0,0.354668382198357,0.560677600142307,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.975789649036763,1.06023814657188,0.69716365721711,0.207322110030741,0.252320850875628,0.72995471815166,0,0,0,0,0,0.354920400119532,0.168584690078102,0.482022059766964,0.110293972732394,0.217879444092406,0.237270619111097,0.269662616320329,0,0,0,0,0,0,0,0,0,0.882926198829301,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,2.37061319387782,0,0,0,0,0.93733833986777,0,0.141775097242386,0,0.581267877027924,0,0,0.264145302039678,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0.285955987316295,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0.606255142892519,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0.247528499761764,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0.0852266274161009,0,0.330569830721956,0.192190067365106,1.02090169995667,0,0,0,0.6970372701606,0,0.532306030317022,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.640944426764839,0,0.490080431962063,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0.37428108081644,0,0,0.222886768554957,0,0,0.296964680832639,0.614321404198464,0,0.844016498463076,0.111308705022906,0,5.70038601945582,0,0.276283915531148,0.251932747854276,0,0,0,0.179736702294654,0,0,0,0,0,0.969332746095218,0.74214478529481,0,0.260427761085233,0.349839999984783,0,0,0,0.236387681767936,0,0,0.173624994933292,16.8290863304629,12.7832224942932,4.5774520895125,0.552896299656123,0.591095237907095,1.31631238292384,0.10893846351899,0.557694977114413,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0.421996129056054,3.59112177950125,0,0.216388639742091,0,0.0884575645033392,0,0,0.247127877893006,0.313265848516366,0.134802265961354,0,3.51396668588009,0,0.978323094660449,0.242780379534093,0,0,0,0,0.60129367765797,0.103688191397247,0,0,0,0,0.569219092059585,0,0.173559738335131,0.293977192243133,0.435296032902013,1.04836000945218,0.171986032471617,0.19351266257817,0.365446585430928,0.164230914106418,0,0,0.225980740780532,0,0.19871461170299,1.45614830698521,0.391102765469606,0,1.49417096317547,0.19980960958213,0,0.343609788497747,0.514784993585894,0.14405479798815,0.248505071130865,0.235694034616795,0.543616824294456,0.523014231561666,0.101998217636322,0,4.80336230967832,1.64286454670392,0,0.429765441419957,0,0,0,0,0,0,0.223171457441873,0.268733889946905,0,0,0.157566364614447,0,0.0674035438541849,0.78741985211799,0,0.795229689809303,0.408610218334727,0.643012593860077,1.37539436597234,1.24632101408756,0,0.77380195455795,1.88323625639876,0.335434687599266,0.315222829196793,0.367182116944987,0.105600336519406,0,0.575745591958336,0.714695326373367,0,0,0,0,0,1.19730191562487,0,0,0.113312091520126,0.58620893471233,0,0.387848869084652,0,0.684347351537318,0.704815022316672,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0.886068179966986,1.09823638411767,0.500763722825999,0.573409195690071,0.110929051536852,0.124192805882767,0.415045904808692,0,0.303298235083296,0,0,0.936669811613763,1.01444720027578,0,0,0.554805861502613,0,0.251567901752575,0,0,0,0,0.147855149989634,0,0,0,0.414706207840855,0,0,0.150257608997218,0,0,0,0,0,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,0.428883182749851,0,0.453411851024545,0,0.244736704506468,0,0.617602894321944,0.219284049578707,0.353378291891762,0.38582807654183,0.168942440653073,0,0,0,0.829550616910385,0,0,0,0,0.245772908753719,0,0.39997479170986,0.106691729694141,0,0.567515953566836,0,0,0,0.127894371303652,0.215649622793364,0,0.218419276384028,0,0,0.619678821295011,0,0,0.0788617450012534,2.40171224485641,0,0,8.0928823621539,2.8339315265117,0.63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| ||
|short_description=p5@RIC8B | |short_description=p5@RIC8B | ||
}} | }} |
Latest revision as of 03:12, 16 September 2015
Short description: | p5@RIC8B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RIC8B_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 0bp_to_ENST00000462949_5end |
EntrezGene: | RIC8B |
HGNC: | 25555 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data